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SR-VP_4-6_scaffold_141_476970_prodigal-single.1__X__X__00088

Bact-Vir

SR-VP_4-6_scaffold_141_476970_prodigal-single.1__X__X__00088

Identity

Kingdom:
phage

Quality

82.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 227-326
PDB
Domain cluster: representative
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1zs3A00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.76 53.0 4.31e-01 70.0% 81.3%
1s3qG00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.70 49.0 4.17e-01 73.0% 94.5%
1vmgA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.69 45.0 4.94e-01 78.0% 80.5%
4rngC00 1.20.1280.290 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.69 46.0 5.07e-01 78.0% 81.9%
4bfiB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.69 36.0 3.82e-01 99.0% 57.8%
1vq8S00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.68 36.0 4.01e-01 100.0% 64.2%
2c41C01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.67 51.0 4.43e-01 79.0% 67.8%
2chpA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.67 50.0 4.39e-01 79.0% 70.3%
3hz7A00 3.30.110.40 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain 0.66 31.0 3.58e-01 98.0% 60.3%
3bp6B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 35.0 3.73e-01 100.0% 60.2%
1yvwA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.64 46.0 4.84e-01 78.0% 80.4%
1yuzB01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.64 49.0 4.39e-01 80.0% 69.6%
1tjoB00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.64 48.0 4.03e-01 80.0% 65.7%
2e9xA01 1.20.58.1030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 46.0 4.17e-01 74.0% 66.4%
4qndA00 1.20.1280.290 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.61 42.0 4.26e-01 79.0% 72.2%
3unoE00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.60 50.0 4.20e-01 89.0% 96.4%
4i0kA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 35.0 3.60e-01 100.0% 60.0%
6x4tA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 34.0 3.72e-01 100.0% 67.1%
1wlhA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 31.0 3.06e-01 100.0% 47.6%
2anrA02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.58 32.0 3.59e-01 100.0% 70.7%
5vhgA00 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.56 42.0 3.68e-01 100.0% 52.7%
3rghA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 30.0 3.05e-01 100.0% 52.1%
4d53A00 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.55 37.0 3.36e-01 100.0% 51.9%
2kwbA00 2.170.150.10 Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A 0.55 45.0 3.76e-01 92.0% 84.7%
4bujE03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.54 45.0 3.56e-01 94.0% 70.0%
3o4oB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 36.0 3.49e-01 100.0% 64.2%
2avxA00 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.52 39.0 3.23e-01 77.0% 93.6%
2pt7G02 3.30.1370.180 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.51 27.0 3.14e-01 99.0% 71.6%
6cc0A01 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.51 38.0 3.20e-01 78.0% 97.0%
3duwA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 39.0 3.05e-01 100.0% 37.9%
ECOD (37)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4965518 3636.1.1.0 a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain 0.75 66.0 6.53e-01 94.0% 96.2%
3961 150.1.1.7 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › DUF892 0.73 50.0 4.25e-01 70.0% 89.4%
4160603 3636.1.1.0 a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain 0.70 60.0 5.03e-01 96.0% 98.9%
3969698 3636.1.1.0 a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain 0.68 58.0 5.53e-01 97.0% 100.0%
307814 150.1.1.1 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Ferritin 0.67 51.0 4.33e-01 79.0% 64.3%
1936503 304.109.1.1 a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23 0.67 36.0 3.76e-01 100.0% 57.1%
5001301 3636.1.1.0 a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain 0.65 55.0 5.04e-01 94.0% 98.5%
3924740 622.1.1.1 alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HSCB_C 0.65 45.0 4.89e-01 78.0% 83.5%
4945332 3636.1.1.0 a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain 0.65 55.0 5.01e-01 96.0% 97.1%
3473214 150.1.1.1 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Ferritin 0.65 55.0 4.45e-01 90.0% 81.7%
3732769 610.4.1.1 alpha arrays › ERP29 C domain-like › YqeY domain › YqeY domain › YqeY 0.64 48.0 4.13e-01 78.0% 54.2%
4036079 4076.2.1.0 a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like 0.64 48.0 4.18e-01 78.0% 73.8%
4065692 622.1.1.0 alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain 0.64 46.0 4.81e-01 78.0% 82.2%
5008490 159.1.1.1 alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 › MazG 0.63 46.0 4.91e-01 79.0% 86.4%
4999586 3636.1.1.0 a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain 0.63 54.0 4.73e-01 98.0% 97.4%
5030078 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.62 45.0 3.28e-01 77.0% 58.0%
3989360 6155.1.1.0 alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter 0.62 45.0 4.69e-01 77.0% 86.3%
3287390 150.1.1.1 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Ferritin 0.61 50.0 4.10e-01 87.0% 92.2%
3719272 872.3.1.5 a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 0.61 35.0 4.15e-01 100.0% 81.4%
4099493 622.1.1.1 alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HSCB_C 0.61 45.0 4.68e-01 77.0% 85.3%
4046023 622.1.1.1 alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HSCB_C 0.60 45.0 4.74e-01 77.0% 91.1%
3415759 622.1.1.1 alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HSCB_C 0.60 45.0 4.86e-01 78.0% 94.1%
3999236 622.1.1.1 alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HSCB_C 0.59 44.0 4.39e-01 78.0% 84.8%
4948237 3636.1.1.0 a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain 0.59 49.0 4.47e-01 95.0% 97.9%
4016845 622.1.1.1 alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HSCB_C 0.59 43.0 4.58e-01 77.0% 85.6%
3278331 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.57 41.0 3.62e-01 100.0% 51.7%
3412911 11.1.1.108 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.57 36.0 3.45e-01 100.0% 56.5%
3609959 873.1.1.4 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › TRAPP 0.56 37.0 3.13e-01 100.0% 40.6%
3593709 4156.1.1.0 alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like 0.55 47.0 4.29e-01 92.0% 86.2%
5051275 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.55 29.0 3.31e-01 100.0% 68.0%
3609469 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 32.0 3.29e-01 100.0% 60.0%
3469378 2003.1.5.73 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 0.54 40.0 2.94e-01 78.0% 82.6%
3677764 304.8.1.23 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Helitron_like_N 0.53 39.0 3.43e-01 100.0% 54.3%
4410522 223.1.1.7 a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind 0.51 39.0 3.28e-01 79.0% 99.4%
3263142 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.51 36.0 2.48e-01 72.0% 83.1%
4983717 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.51 39.0 3.36e-01 80.0% 86.5%
3966522 225.1.1.11 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › DUF6272 0.51 41.0 3.45e-01 92.0% 49.7%
D2 high residues 384-483_800-881
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13307.13 best Helicase_C_2 47.9 2.30e-12 84.1% 97.1%
D3 high residues 494-588_755-796
PDB
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6zgqA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.88 85.0 8.25e-01 100.0% 96.6%
2lwyA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.86 77.0 7.68e-01 100.0% 92.8%
1dq3A01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.84 80.0 7.25e-01 100.0% 96.0%
1mi8A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.82 74.0 7.36e-01 100.0% 92.2%
4o1sA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.81 78.0 7.14e-01 100.0% 92.9%
1at0A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.81 76.0 7.49e-01 100.0% 93.8%
2jmzA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.80 75.0 6.98e-01 100.0% 95.8%
2lcjA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.80 76.0 6.76e-01 100.0% 96.2%
2cw8A01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.80 76.0 6.99e-01 100.0% 95.9%
5o9iA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.80 76.0 6.95e-01 100.0% 95.9%
4e2tB00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.79 75.0 6.92e-01 100.0% 95.9%
1am2A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.77 73.0 6.58e-01 100.0% 95.6%
6vgwA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.76 69.0 6.89e-01 100.0% 93.6%
ECOD (81)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4500960 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.93 90.0 8.80e-01 100.0% 95.9%
4950409 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.90 87.0 8.25e-01 100.0% 91.0%
4996401 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.90 86.0 8.09e-01 100.0% 93.8%
5065932 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.90 83.0 8.26e-01 100.0% 93.6%
2675767 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.89 86.0 8.18e-01 100.0% 92.2%
5028312 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.86 77.0 7.70e-01 100.0% 91.4%
259963 69.1.1.3 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT 0.86 77.0 7.68e-01 100.0% 92.8%
5035795 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.85 80.0 7.88e-01 100.0% 93.8%
5028788 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.85 77.0 7.71e-01 100.0% 93.6%
4940451 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.85 77.0 7.76e-01 99.3% 95.6%
4170121 69.1.1.11 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT, Intein_splicing 0.84 79.0 7.31e-01 100.0% 95.3%
5030213 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.84 77.0 7.49e-01 100.0% 88.7%
5037092 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.83 37.0 5.18e-01 99.3% 84.3%
4993581 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.83 79.0 7.29e-01 100.0% 92.4%
4629526 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.83 79.0 5.85e-01 100.0% 97.7%
5029540 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.83 79.0 7.42e-01 100.0% 95.6%
3604383 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.83 79.0 6.60e-01 100.0% 95.8%
4335483 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.82 78.0 6.45e-01 100.0% 96.9%
4978473 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.82 78.0 7.18e-01 100.0% 97.1%
5078549 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.82 78.0 7.37e-01 100.0% 92.5%
4982797 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.82 77.0 7.56e-01 100.0% 93.1%
4993813 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.82 78.0 7.34e-01 100.0% 94.4%
5023539 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.82 78.0 7.46e-01 100.0% 96.8%
5035476 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.82 78.0 7.36e-01 100.0% 93.8%
5031914 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.81 77.0 6.88e-01 100.0% 91.9%
3963364 69.1.1.3 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT 0.81 76.0 7.49e-01 100.0% 93.1%
4993128 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 78.0 7.30e-01 100.0% 93.1%
4487998 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.81 77.0 6.99e-01 100.0% 77.7%
4983458 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 77.0 7.21e-01 100.0% 95.2%
4600944 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 77.0 6.98e-01 100.0% 77.7%
5029355 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.81 77.0 7.50e-01 100.0% 96.0%
4993454 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 77.0 6.28e-01 100.0% 94.5%
5024341 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.81 77.0 6.84e-01 100.0% 93.5%
3934143 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.81 75.0 7.46e-01 100.0% 95.0%
4070999 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.81 76.0 7.30e-01 100.0% 87.7%
3604113 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.81 77.0 7.57e-01 100.0% 94.5%
4993927 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.81 76.0 7.39e-01 99.3% 100.0%
3517362 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.81 76.0 7.50e-01 100.0% 94.4%
5012699 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.81 77.0 7.06e-01 100.0% 96.5%
4993853 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 77.0 7.14e-01 100.0% 95.8%
4996523 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 77.0 6.61e-01 100.0% 95.0%
4039971 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.81 76.0 6.94e-01 100.0% 94.3%
2524072 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.80 76.0 7.02e-01 100.0% 94.7%
3602222 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.80 76.0 6.26e-01 99.3% 97.3%
164902 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.80 75.0 6.80e-01 100.0% 89.4%
182766 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.80 76.0 6.76e-01 100.0% 96.2%
5013038 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.80 76.0 7.17e-01 100.0% 93.8%
4983616 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.80 75.0 6.95e-01 100.0% 95.3%
4977673 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.80 76.0 6.29e-01 100.0% 96.4%
3603108 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.80 74.0 7.30e-01 100.0% 92.4%
3511246 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.80 76.0 7.06e-01 100.0% 84.8%
4930433 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.80 76.0 7.24e-01 100.0% 94.2%
4971412 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.80 75.0 6.71e-01 98.5% 97.2%
5031634 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.80 76.0 7.12e-01 100.0% 90.6%
4975971 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.80 70.0 7.17e-01 100.0% 96.2%
4993480 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.80 75.0 7.11e-01 100.0% 94.4%
5066389 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.80 75.0 6.64e-01 100.0% 94.2%
3603291 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.79 75.0 6.82e-01 100.0% 92.0%
4342207 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.79 75.0 7.31e-01 100.0% 94.7%
5014854 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.79 75.0 6.30e-01 100.0% 94.4%
4945569 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.79 75.0 7.17e-01 100.0% 92.3%
3495262 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.79 74.0 6.71e-01 100.0% 85.6%
4872043 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.79 75.0 7.26e-01 100.0% 92.0%
5022295 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.79 75.0 6.96e-01 100.0% 93.9%
4975503 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.79 74.0 6.68e-01 100.0% 95.6%
4642797 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.78 74.0 6.80e-01 100.0% 95.3%
4999902 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.78 74.0 7.28e-01 100.0% 95.2%
4997604 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.78 74.0 6.78e-01 100.0% 91.8%
4979989 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.78 73.0 6.61e-01 100.0% 92.8%
4586920 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.77 73.0 7.02e-01 100.0% 94.8%
3604439 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.77 73.0 6.70e-01 100.0% 93.5%
4940943 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.77 73.0 6.73e-01 100.0% 94.1%
5002632 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.77 73.0 7.09e-01 100.0% 94.0%
5029854 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.77 73.0 6.18e-01 100.0% 93.3%
5052154 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.77 73.0 6.77e-01 100.0% 95.2%
4979631 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.77 73.0 7.08e-01 100.0% 95.3%
4315406 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.77 73.0 6.57e-01 100.0% 96.1%
5028299 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.77 72.0 6.91e-01 100.0% 94.8%
2701967 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.77 68.0 6.86e-01 100.0% 94.2%
4984220 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.77 72.0 6.91e-01 100.0% 96.8%
4948019 69.1.1.17 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › MCM 0.76 71.0 6.48e-01 100.0% 93.1%
D4 medium residues 21-88_184-219_336-383
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04851.22 best ResIII 32.8 8.80e-08 73.7% 76.2%
CATH (88)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1z3iX01 3.40.50.10810 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tandem AAA-ATPase domain 0.85 76.0 6.07e-01 93.4% 85.6%
2v1xA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.85 77.0 6.67e-01 95.4% 86.8%
8oosG01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.84 75.0 6.60e-01 92.8% 94.7%
3crvA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.84 77.0 6.40e-01 96.1% 96.7%
6yhrA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.82 73.0 6.63e-01 92.8% 91.8%
3i5xA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.82 76.0 6.34e-01 97.4% 81.8%
1wp9A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.82 78.0 6.98e-01 98.7% 93.0%
2p6rA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.82 75.0 6.85e-01 96.1% 89.2%
2z0mA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.82 74.0 6.73e-01 94.1% 89.0%
3v4rA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.82 75.0 6.20e-01 95.4% 93.9%
1yksA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.82 65.0 6.05e-01 81.6% 97.2%
2vl7A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.81 74.0 7.09e-01 95.4% 97.7%
6x50A03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.81 72.0 6.29e-01 91.4% 80.0%
4w7sA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.81 73.0 5.90e-01 94.7% 75.0%
7r7jA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.81 75.0 6.92e-01 97.4% 98.4%
8tbxA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.81 72.0 6.23e-01 94.1% 84.4%
1hv8A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.81 65.0 6.55e-01 82.9% 100.0%
2hyiC02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.80 66.0 6.37e-01 84.9% 93.4%
4w7sA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.80 66.0 6.10e-01 85.5% 87.6%
2yjtD00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.80 67.0 6.41e-01 86.8% 96.5%
2fwrA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.80 74.0 6.98e-01 97.4% 88.8%
5dcaA09 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.80 74.0 6.50e-01 97.4% 89.0%
7pliF02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.80 64.0 6.45e-01 82.9% 100.0%
2p6nA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.80 65.0 6.38e-01 84.2% 95.6%
4crwB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.79 64.0 6.30e-01 82.9% 96.2%
7clgB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.79 71.0 7.08e-01 94.1% 100.0%
3rc3A03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.79 65.0 6.43e-01 85.5% 93.1%
6b4kB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.79 65.0 6.25e-01 85.5% 93.5%
1xtiA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.79 63.0 6.10e-01 82.2% 92.7%
1c4oA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.78 69.0 6.93e-01 93.4% 91.5%
7w0bA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.78 74.0 6.49e-01 100.0% 98.1%
7a8rA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.78 62.0 5.59e-01 82.9% 98.0%
1c4oA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.78 61.0 5.79e-01 80.9% 87.4%
4b3fX01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.77 71.0 5.36e-01 96.1% 73.5%
1gkuB03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.77 62.0 5.82e-01 83.6% 81.1%
4nl4H03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.77 69.0 6.29e-01 95.4% 92.3%
3vkwA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.74 61.0 6.36e-01 84.9% 97.9%
8jx6B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.74 67.0 6.05e-01 96.1% 94.5%
7nadx02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 64.0 5.39e-01 90.8% 100.0%
3dmnA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 59.0 5.81e-01 84.2% 87.0%
2eyqA04 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 56.0 4.71e-01 81.6% 61.8%
2zpaA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.71 61.0 6.42e-01 90.8% 100.0%
5q22A02 3.40.50.12650 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.69 49.0 5.02e-01 97.4% 75.7%
1m6nA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 57.0 5.40e-01 86.8% 95.4%
8bnsD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 62.0 5.73e-01 96.1% 96.2%
5fhgA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 61.0 5.63e-01 96.1% 91.2%
2cvhA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 60.0 5.35e-01 96.7% 84.6%
2yxlA04 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.67 52.0 4.72e-01 81.6% 95.6%
5ywwA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 52.0 4.88e-01 95.4% 68.4%
2ekdA00 3.40.50.11570 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF257 0.65 58.0 5.24e-01 95.4% 89.6%
8dgfB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 59.0 5.40e-01 96.7% 77.0%
3sg0A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 47.0 4.79e-01 78.3% 90.8%
1c9kB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 51.0 4.79e-01 84.9% 96.7%
3lopA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 47.0 4.87e-01 78.3% 90.8%
3vkgA17 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 48.0 5.23e-01 92.8% 99.2%
3duwA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 54.0 4.80e-01 96.1% 77.2%
1lssA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 44.0 4.71e-01 78.9% 87.1%
3vkgA05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 54.0 5.53e-01 95.4% 98.7%
3tauA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 33.0 3.57e-01 91.4% 61.7%
3nbxX01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 54.0 4.86e-01 96.7% 70.8%
2l82A00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 48.0 4.74e-01 84.9% 84.0%
2nwqA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 47.0 4.20e-01 82.9% 81.7%
7wd3A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 53.0 5.11e-01 92.8% 96.4%
4pcaB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 52.0 4.60e-01 93.4% 87.6%
7pcrA01 3.40.50.10710 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Metallo-hydrolase/oxidoreductase 0.60 51.0 5.16e-01 93.4% 99.3%
1d2nA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 53.0 5.06e-01 94.1% 90.1%
4maaA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 45.0 4.37e-01 79.6% 93.5%
4evqA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 45.0 4.52e-01 80.3% 93.7%
2frxB01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 51.0 4.16e-01 96.1% 77.9%
3hl0A01 3.40.50.1970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 47.0 4.70e-01 86.8% 91.8%
8c9vA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 50.0 4.79e-01 94.1% 84.0%
7tjhE01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 51.0 4.82e-01 93.4% 100.0%
4iscA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 51.0 5.07e-01 94.7% 92.9%
2avdA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 50.0 4.45e-01 94.1% 87.7%
2gpyB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 50.0 4.65e-01 94.1% 87.5%
1b0zA01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.58 43.0 3.78e-01 77.6% 85.9%
3t15A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 51.0 5.07e-01 95.4% 92.9%
1svmA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 50.0 5.08e-01 95.4% 100.0%
3vkgA10 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 49.0 4.54e-01 94.1% 88.3%
6bogA05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 45.0 4.13e-01 88.8% 90.4%
4lpsA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 44.0 3.99e-01 87.5% 66.0%
1fuyB01 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 41.0 4.07e-01 94.1% 72.0%
2i6gB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 49.0 4.52e-01 100.0% 90.5%
1wp9A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 45.0 4.55e-01 90.1% 95.3%
3pi7A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 46.0 4.69e-01 93.4% 96.6%
1xhcA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 36.0 4.02e-01 77.6% 87.3%
3d3qA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 43.0 4.34e-01 88.2% 87.7%
3hh1A00 3.40.1010.10 Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › Tetrapyrrole methylase, N-terminal domain 0.51 37.0 4.09e-01 84.9% 99.1%
ECOD (96)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5017816 2004.1.1.120 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII 0.96 89.0 7.22e-01 94.1% 92.0%
4927355 2004.1.1.144 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 0.95 87.0 6.90e-01 92.8% 94.0%
4954133 2004.1.1.144 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 0.95 89.0 7.02e-01 96.1% 85.5%
4965517 2004.1.1.144 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 0.93 86.0 7.19e-01 94.7% 91.9%
5062303 2004.1.1.144 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 0.88 82.0 6.65e-01 98.0% 95.8%
5037418 2004.1.1.144 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 0.88 80.0 6.35e-01 94.7% 92.4%
3977708 2004.1.1.485 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD, DEAD_2 0.87 79.0 6.25e-01 95.4% 91.6%
5038713 2004.1.1.144 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 0.86 79.0 6.25e-01 95.4% 88.6%
4937096 2004.1.1.144 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 0.86 78.0 6.33e-01 94.1% 95.0%
5054851 2004.1.1.144 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 0.86 78.0 6.13e-01 94.1% 93.7%
3936890 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.86 77.0 6.16e-01 93.4% 69.3%
3939033 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.85 77.0 6.40e-01 93.4% 78.8%
3928922 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.84 75.0 6.43e-01 93.4% 84.3%
4013550 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.84 78.0 6.30e-01 96.7% 81.5%
3404309 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.84 80.0 5.18e-01 100.0% 62.5%
4013220 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.84 77.0 6.09e-01 96.7% 85.9%
None 0.84 78.0 5.42e-01 96.7% 54.0%
4030842 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.84 76.0 6.96e-01 94.7% 95.3%
3941290 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.84 76.0 6.52e-01 94.7% 85.3%
3192285 2004.1.1.428 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom, Helicase_C, HDA2-3 0.84 79.0 5.09e-01 100.0% 35.9%
4218528 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.84 74.0 6.67e-01 92.8% 93.0%
4953117 2004.1.1.120 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII 0.83 77.0 7.30e-01 96.7% 96.6%
3788293 2004.1.1.468 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom, DBINO 0.83 77.0 5.85e-01 96.7% 65.3%
4967737 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.83 79.0 5.65e-01 100.0% 95.2%
3891554 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.83 74.0 6.36e-01 94.1% 76.5%
3825104 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.83 76.0 6.36e-01 96.1% 77.5%
4064274 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.82 79.0 4.93e-01 100.0% 53.5%
None 0.82 75.0 5.16e-01 95.4% 86.0%
4953333 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.82 76.0 6.97e-01 96.7% 87.4%
None 0.82 74.0 5.21e-01 93.4% 97.0%
4379605 2004.1.1.468 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom, DBINO 0.82 77.0 6.03e-01 98.7% 78.3%
3089043 2004.1.1.120 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII 0.82 76.0 6.97e-01 96.7% 93.6%
4030483 2004.1.1.364 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.82 77.0 5.20e-01 100.0% 73.3%
4944925 2004.1.1.120 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII 0.82 73.0 6.90e-01 92.8% 87.4%
4008734 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.81 74.0 5.76e-01 95.4% 57.6%
3679871 2004.1.1.364 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.81 76.0 5.29e-01 100.0% 87.8%
5039175 2004.1.1.23 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.81 74.0 6.19e-01 96.7% 85.7%
4447432 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.81 66.0 6.20e-01 84.9% 86.1%
3585239 2004.1.1.364 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.80 76.0 5.14e-01 100.0% 69.6%
3597207 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.80 76.0 5.33e-01 100.0% 82.1%
3429332 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.80 65.0 5.96e-01 84.2% 79.8%
5027925 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.80 65.0 6.39e-01 83.6% 95.6%
4966115 2004.1.1.120 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII 0.80 71.0 6.24e-01 92.1% 72.9%
None 0.80 67.0 5.63e-01 86.2% 62.1%
3355988 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.80 76.0 5.12e-01 100.0% 70.3%
5052258 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.80 75.0 4.92e-01 100.0% 87.1%
5026034 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.80 65.0 6.53e-01 84.9% 98.7%
3831995 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.80 65.0 5.57e-01 84.2% 69.3%
5034645 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.80 65.0 6.14e-01 84.2% 88.6%
3688531 2004.1.1.364 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.79 75.0 5.30e-01 100.0% 80.7%
4943478 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.79 61.0 5.16e-01 78.9% 99.1%
5014580 2004.1.1.120 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII 0.79 75.0 6.84e-01 98.7% 87.4%
5078829 2004.1.1.233 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cas3-like_C_2 0.79 75.0 5.26e-01 100.0% 84.0%
3315112 2004.1.1.364 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.79 76.0 5.23e-01 100.0% 75.1%
3711265 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.79 63.0 6.34e-01 82.9% 99.4%
4029333 2004.1.1.232 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEXQc_Suv3 0.79 68.0 5.10e-01 89.5% 49.0%
4937538 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.79 65.0 6.31e-01 84.9% 93.9%
3990336 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.79 65.0 5.18e-01 85.5% 52.9%
5078264 2004.1.1.120 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII 0.79 75.0 6.16e-01 99.3% 65.6%
4250757 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.79 65.0 6.27e-01 86.2% 92.4%
4941079 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.78 66.0 6.15e-01 86.8% 87.8%
3725350 2004.1.1.232 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEXQc_Suv3 0.78 64.0 4.89e-01 85.5% 44.9%
4991683 2004.1.1.194 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C_2 0.78 63.0 5.92e-01 83.6% 98.3%
3190243 2004.1.1.232 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEXQc_Suv3 0.78 66.0 5.44e-01 87.5% 68.4%
5039939 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.78 66.0 6.23e-01 87.5% 96.0%
4600908 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.78 74.0 4.84e-01 100.0% 84.4%
419052 2004.1.1.232 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEXQc_Suv3 0.78 68.0 6.46e-01 90.8% 89.0%
9759 2004.1.1.151 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Flavi_DEAD 0.78 62.0 6.44e-01 82.9% 95.1%
4003840 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.77 65.0 5.83e-01 88.2% 90.2%
None 0.77 60.0 5.26e-01 80.3% 69.8%
4534097 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.77 73.0 4.91e-01 100.0% 83.9%
3946210 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.77 63.0 5.47e-01 84.9% 95.0%
3988221 2004.1.1.554 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrB_inter 0.77 67.0 4.97e-01 92.8% 98.6%
5022287 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.76 57.0 5.38e-01 77.0% 82.2%
5008809 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.76 72.0 4.88e-01 100.0% 85.4%
5001751 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.76 61.0 5.49e-01 83.6% 96.5%
4971857 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.74 58.0 5.22e-01 81.6% 78.0%
3614089 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.74 65.0 5.57e-01 91.4% 84.0%
5008122 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.73 65.0 6.07e-01 92.8% 100.0%
5008480 2004.1.1.233 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cas3-like_C_2 0.69 53.0 5.00e-01 78.9% 93.9%
4797722 2004.1.1.151 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Flavi_DEAD 0.69 58.0 6.22e-01 88.2% 100.0%
4943379 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 49.0 5.16e-01 97.4% 84.4%
4991525 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.65 59.0 5.56e-01 98.7% 81.6%
4991834 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.65 56.0 4.73e-01 94.1% 70.8%
4930996 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.63 57.0 5.08e-01 96.7% 80.5%
5069539 2004.1.1.1200 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF835 0.63 58.0 5.39e-01 99.3% 91.1%
4937193 2004.1.1.231 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RNase_J_b_CASP 0.63 55.0 5.39e-01 94.1% 98.8%
4015501 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.63 57.0 4.78e-01 99.3% 82.4%
5070892 2004.1.1.42 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.62 56.0 4.96e-01 97.4% 79.5%
5067594 2004.1.1.1200 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF835 0.61 52.0 5.15e-01 90.8% 97.5%
None 0.59 50.0 4.43e-01 90.1% 95.9%
4280062 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.58 46.0 4.21e-01 97.4% 63.0%
4030636 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.58 52.0 4.20e-01 100.0% 67.9%
2327192 2004.7.1.0 a/b three-layered sandwiches › P-loop domains-like › VP4 N-terminal domain › VP4 N-terminal domain 0.55 36.0 3.63e-01 88.8% 65.3%
3986418 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.55 45.0 4.23e-01 90.8% 86.2%
1878820 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.52 37.0 3.70e-01 72.4% 79.5%
D5 medium residues 89-183
PDB
D6 medium residues 593-682
PDB
CATH (62)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2dchX01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.82 69.0 6.89e-01 90.0% 89.2%
1dfaA03 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.79 63.0 6.18e-01 84.4% 91.6%
3c0wA02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.76 63.0 6.05e-01 88.9% 89.3%
2dchX02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.76 62.0 5.79e-01 87.8% 78.4%
5a72A00 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.76 64.0 5.32e-01 92.2% 84.7%
1dq3A04 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.76 63.0 5.79e-01 90.0% 77.2%
3hyiA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.75 67.0 5.14e-01 95.6% 61.8%
8dy9I01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.75 66.0 4.98e-01 95.6% 49.5%
7qssA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.74 67.0 5.24e-01 100.0% 59.0%
1ef0B02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.74 63.0 4.91e-01 92.2% 85.6%
2vs7A02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.74 56.0 5.98e-01 81.1% 98.7%
4yhxA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.74 61.0 5.24e-01 90.0% 67.4%
2ex5A00 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.72 61.0 4.66e-01 92.2% 49.8%
4lq0A02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.72 58.0 4.92e-01 87.8% 89.8%
1dq3A03 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.71 58.0 5.95e-01 88.9% 100.0%
1b24A01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.71 62.0 6.11e-01 96.7% 98.9%
3k6hA01 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.67 46.0 3.76e-01 71.1% 84.4%
5i2cB01 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.65 50.0 4.25e-01 82.2% 100.0%
1zhvA00 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.65 48.0 4.22e-01 78.9% 94.8%
4iw7A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.64 44.0 4.13e-01 72.2% 59.1%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.63 43.0 4.63e-01 70.0% 93.3%
1js3A03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.63 43.0 4.23e-01 70.0% 76.3%
2b30A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.62 45.0 4.27e-01 76.7% 95.4%
6vudA02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.62 42.0 4.57e-01 71.1% 90.7%
3mmlF01 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.61 43.0 4.61e-01 76.7% 84.8%
1nf2A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.61 42.0 3.99e-01 71.1% 92.5%
5idmA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.61 45.0 3.63e-01 77.8% 92.7%
1i6uA01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.61 40.0 4.48e-01 70.0% 89.7%
2fphX01 3.30.1370.160 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.60 40.0 4.27e-01 70.0% 77.9%
3mpoA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.60 41.0 3.91e-01 70.0% 91.6%
2iruA02 3.30.70.3300 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 42.0 3.62e-01 71.1% 76.1%
3zxoA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.60 45.0 4.05e-01 78.9% 98.4%
1zvpD00 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.60 44.0 3.88e-01 76.7% 87.8%
2bv6A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 53.0 4.65e-01 100.0% 67.6%
2cpmA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.59 40.0 4.02e-01 71.1% 66.0%
5eriA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 52.0 4.40e-01 100.0% 58.8%
2dt9A01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.59 41.0 4.42e-01 72.2% 87.8%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 52.0 5.03e-01 100.0% 93.0%
6lgqC01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.58 43.0 3.78e-01 77.8% 99.2%
1kyzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 42.0 4.11e-01 78.9% 80.6%
2zihC00 1.10.3630.10 Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like 0.57 50.0 3.57e-01 97.8% 80.6%
2gukA00 3.30.2190.10 Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like 0.57 44.0 4.08e-01 80.0% 82.0%
2lrrA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.57 41.0 4.57e-01 75.6% 97.1%
2l48A00 3.30.70.2030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 43.0 4.41e-01 87.8% 82.4%
7npaA02 3.30.70.3340 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 39.0 4.05e-01 71.1% 77.6%
2pcrA02 3.40.190.80 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › 0.57 40.0 3.73e-01 74.4% 92.2%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 42.0 3.90e-01 82.2% 72.5%
4r3aA02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.56 42.0 3.66e-01 81.1% 97.2%
3jz3B01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.56 41.0 3.52e-01 78.9% 79.7%
2if1A00 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.55 39.0 3.56e-01 74.4% 65.9%
2di8A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 39.0 3.91e-01 73.3% 89.4%
3dmgA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 38.0 3.10e-01 73.3% 36.2%
3hnrA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 39.0 3.05e-01 73.3% 48.7%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 45.0 4.36e-01 93.3% 82.9%
3ossD00 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.55 38.0 3.18e-01 72.2% 52.9%
2pjdA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 39.0 3.32e-01 91.1% 44.2%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 44.0 4.22e-01 92.2% 84.0%
4qpkB02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.53 39.0 3.49e-01 78.9% 97.8%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 44.0 4.22e-01 93.3% 84.8%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 42.0 3.98e-01 91.1% 75.9%
1ka8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 41.0 4.05e-01 90.0% 97.0%
3pieA02 3.30.1370.250 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.51 37.0 3.67e-01 80.0% 98.0%
ECOD (83)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4978474 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.87 71.0 6.07e-01 88.9% 57.0%
4978366 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.85 57.0 6.43e-01 72.2% 88.6%
5046395 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.85 60.0 6.51e-01 72.2% 86.7%
5066572 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.83 65.0 6.13e-01 82.2% 73.3%
5028300 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.82 72.0 7.41e-01 92.2% 97.6%
4978265 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.81 64.0 5.16e-01 82.2% 47.5%
5023542 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.81 64.0 6.93e-01 88.9% 100.0%
3602223 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.81 67.0 6.59e-01 88.9% 83.2%
4943246 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.80 67.0 6.45e-01 88.9% 82.0%
4997606 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.80 66.0 5.43e-01 87.8% 52.9%
4997777 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.80 68.0 6.96e-01 91.1% 100.0%
172962 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.80 65.0 6.16e-01 95.6% 73.6%
4979525 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.80 72.0 5.53e-01 98.9% 50.3%
4999898 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.80 66.0 6.64e-01 88.9% 100.0%
4993809 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.80 70.0 6.76e-01 94.4% 100.0%
3603717 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.80 66.0 7.00e-01 92.2% 100.0%
5012958 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.79 68.0 5.98e-01 92.2% 66.2%
5029252 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.79 66.0 5.99e-01 90.0% 76.7%
4212314 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.79 65.0 6.27e-01 87.8% 88.0%
5012700 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.79 66.0 6.81e-01 92.2% 95.3%
5022297 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.79 66.0 6.50e-01 90.0% 84.2%
3604140 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.79 64.0 5.03e-01 87.8% 44.3%
4975576 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.78 67.0 6.70e-01 92.2% 100.0%
4559752 242.1.1.6 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA 0.78 63.0 6.35e-01 85.6% 91.1%
4971295 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.78 64.0 6.37e-01 88.9% 96.8%
4288172 242.1.1.6 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA 0.78 62.0 5.41e-01 84.4% 63.1%
4938255 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.78 64.0 6.73e-01 97.8% 98.8%
5052155 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.77 64.0 5.10e-01 88.9% 46.9%
4948575 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.77 65.0 5.62e-01 94.4% 59.4%
4937054 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.77 65.0 6.19e-01 91.1% 85.7%
4992653 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.77 57.0 6.41e-01 78.9% 100.0%
4997605 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.77 66.0 6.41e-01 93.3% 98.0%
4992480 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.77 68.0 6.82e-01 95.6% 100.0%
5046394 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.77 64.0 6.46e-01 90.0% 100.0%
5010185 328.5.1.0 a+b two layers › IF3-like › SirA-like › SirA-like 0.77 48.0 5.45e-01 72.2% 81.4%
1159602 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.77 62.0 5.77e-01 86.7% 77.7%
3170512 242.1.1.2 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.77 63.0 5.87e-01 87.8% 77.3%
4971000 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.77 64.0 6.21e-01 90.0% 81.0%
4997781 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.76 62.0 5.92e-01 87.8% 83.8%
5028488 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.76 62.0 5.90e-01 87.8% 84.8%
5023789 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.76 65.0 6.73e-01 93.3% 98.8%
4933638 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.75 61.0 5.32e-01 88.9% 62.1%
5023543 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.75 62.0 6.04e-01 88.9% 80.0%
4934140 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.75 62.0 5.71e-01 88.9% 74.8%
4464001 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.75 61.0 5.64e-01 87.8% 80.9%
3282307 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.75 66.0 6.49e-01 95.6% 98.9%
4084747 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.75 62.0 4.23e-01 90.0% 27.5%
3602264 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.75 63.0 6.54e-01 91.1% 97.6%
4096150 242.1.1.6 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA 0.75 60.0 5.33e-01 85.6% 65.6%
4200948 242.1.1.2 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.75 64.0 6.18e-01 92.2% 89.0%
1211842 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.75 60.0 5.90e-01 86.7% 91.7%
4626502 242.1.1.6 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA 0.74 60.0 5.35e-01 86.7% 68.8%
4993130 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.73 50.0 5.36e-01 70.0% 88.0%
4979624 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.73 63.0 5.90e-01 94.4% 100.0%
3950276 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.73 60.0 5.79e-01 88.9% 88.0%
4377946 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.73 66.0 5.81e-01 100.0% 100.0%
4131749 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.72 58.0 5.44e-01 87.8% 81.8%
3950275 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.70 55.0 5.67e-01 85.6% 100.0%
4479273 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.69 56.0 4.99e-01 90.0% 73.1%
5014006 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.65 44.0 4.57e-01 70.0% 85.9%
4033853 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.64 46.0 4.45e-01 74.4% 98.0%
3586902 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.62 44.0 4.25e-01 74.4% 97.1%
3581967 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.61 40.0 4.53e-01 71.1% 90.8%
4003644 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.61 43.0 3.44e-01 72.2% 86.3%
5042101 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.61 41.0 4.54e-01 70.0% 90.0%
3780948 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.60 41.0 3.97e-01 72.2% 62.0%
3396645 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.60 40.0 3.90e-01 72.2% 61.0%
3262749 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.59 43.0 4.14e-01 76.7% 83.8%
4885808 7577.1.1.1 a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 0.59 40.0 4.41e-01 70.0% 94.3%
3357930 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.59 42.0 4.57e-01 74.4% 100.0%
3788355 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.59 41.0 2.65e-01 72.2% 26.7%
4608678 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.59 41.0 4.30e-01 71.1% 82.5%
3198781 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.58 42.0 4.29e-01 74.4% 82.4%
3740807 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.58 41.0 4.20e-01 72.2% 76.5%
3250910 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.58 41.0 4.55e-01 73.3% 100.0%
3410614 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.58 41.0 3.91e-01 73.3% 85.7%
3190610 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.57 42.0 4.00e-01 78.9% 90.0%
3281361 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.56 43.0 3.72e-01 82.2% 93.6%
4981529 304.7.1.0 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.54 38.0 3.80e-01 74.4% 91.6%
3216998 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.54 42.0 3.98e-01 86.7% 94.5%
3990789 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 38.0 3.97e-01 75.6% 87.5%
3595328 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.53 40.0 3.92e-01 85.6% 81.9%
3728094 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.50 42.0 4.10e-01 96.7% 93.0%
D7 medium residues 683-754
PDB
Domain cluster: representative
CATH (71)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ef0B02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.81 73.0 5.29e-01 98.6% 51.1%
3hyiA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.77 66.0 4.83e-01 95.8% 38.2%
2cw8A03 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.74 64.0 4.87e-01 95.8% 43.2%
8dy9I01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.73 64.0 4.54e-01 95.8% 38.3%
1yb2A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.73 54.0 3.76e-01 79.2% 69.1%
2dchX02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.71 63.0 5.39e-01 97.2% 73.0%
7xhzA01 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.70 57.0 4.79e-01 90.3% 98.4%
3e05B00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.69 52.0 3.76e-01 79.2% 78.6%
3daoA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.69 56.0 4.88e-01 88.9% 96.3%
4dw8A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.69 55.0 4.80e-01 86.1% 96.2%
1dcoA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.68 51.0 4.62e-01 80.6% 62.6%
6vudA02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.68 54.0 5.34e-01 86.1% 93.3%
1nf2A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.67 53.0 4.69e-01 86.1% 96.2%
2cveA02 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.67 47.0 4.94e-01 80.6% 80.3%
4q5eA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.67 48.0 4.81e-01 76.4% 89.3%
1rkqA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.67 51.0 4.49e-01 81.9% 95.3%
1b4bA00 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.67 46.0 4.68e-01 75.0% 71.8%
6u9hF02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.66 47.0 4.69e-01 77.8% 71.4%
3mpoA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.66 51.0 4.55e-01 84.7% 96.3%
3zx4A02 3.30.980.20 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Putative mannosyl-3-phosphoglycerate phosphatase; domain 2 0.66 51.0 4.81e-01 83.3% 92.0%
1r44A00 3.30.1380.10 Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › 0.66 54.0 3.93e-01 90.3% 70.3%
3hz7A00 3.30.110.40 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain 0.66 53.0 5.36e-01 94.4% 84.9%
2y23A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 45.0 4.00e-01 72.2% 55.8%
1dd5A02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.65 51.0 5.08e-01 86.1% 94.7%
8a9xA01 3.30.1360.100 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM 0.64 49.0 4.91e-01 86.1% 100.0%
1xviA02 3.30.980.20 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Putative mannosyl-3-phosphoglycerate phosphatase; domain 2 0.63 51.0 4.66e-01 87.5% 90.4%
2h1yA02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.63 45.0 4.55e-01 75.0% 80.0%
4iw7A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.62 46.0 3.91e-01 77.8% 54.8%
5ijgA02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.62 47.0 3.85e-01 83.3% 78.6%
3l4gC04 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.62 50.0 3.44e-01 91.7% 87.6%
6ewnA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 43.0 3.87e-01 72.2% 94.9%
5gt8D02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.61 42.0 3.57e-01 72.2% 92.6%
3ub0A02 3.30.70.3540 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nsp8 replicase, head domain 0.61 50.0 4.69e-01 91.7% 100.0%
4lq0A02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.61 52.0 4.23e-01 98.6% 58.5%
5a72A00 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.61 50.0 4.03e-01 95.8% 52.9%
2amyA02 3.30.1240.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › Eukaryotic phosphomannomutase, cap domain 0.61 49.0 4.43e-01 90.3% 93.1%
1gmeA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 48.0 3.78e-01 86.1% 86.7%
3r5lA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 51.0 4.39e-01 95.8% 85.3%
2xy1A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 42.0 3.85e-01 73.6% 68.0%
1af5A00 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.60 49.0 4.15e-01 93.1% 60.3%
2eo5A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.60 48.0 3.85e-01 88.9% 56.8%
7y9aA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 41.0 3.87e-01 70.8% 70.1%
4efjA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.60 50.0 4.14e-01 97.2% 53.6%
4yhxA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.60 50.0 4.10e-01 97.2% 56.0%
3onqA02 3.30.70.2730 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 43.0 4.24e-01 79.2% 84.0%
3douA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 43.0 3.29e-01 79.2% 34.3%
1s7hA01 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 43.0 4.18e-01 77.8% 72.5%
2o0bA01 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.58 50.0 3.59e-01 94.4% 74.2%
1v4pC01 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.58 45.0 4.04e-01 87.5% 86.1%
4igbB02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 44.0 3.52e-01 81.9% 46.9%
3f8kA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 44.0 3.66e-01 97.2% 45.8%
2zfzD00 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.57 46.0 4.47e-01 97.2% 81.0%
4hkqA01 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.57 42.0 3.44e-01 80.6% 77.8%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.56 42.0 4.19e-01 80.6% 77.3%
6torA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.56 45.0 3.66e-01 90.3% 68.1%
1ohvA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.56 45.0 3.50e-01 90.3% 56.0%
5g4iB01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.56 44.0 3.50e-01 90.3% 61.9%
3nx3A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.55 45.0 3.63e-01 90.3% 62.4%
1s12A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.55 42.0 3.95e-01 91.7% 66.0%
2pb2B01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.55 44.0 3.59e-01 90.3% 64.8%
4e1oA03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.55 41.0 3.82e-01 84.7% 66.3%
2mraA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.54 47.0 4.04e-01 98.6% 67.5%
1ejdA01 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.54 45.0 3.28e-01 93.1% 69.6%
1iugA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.54 43.0 3.80e-01 90.3% 80.2%
2asfA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 44.0 3.77e-01 97.2% 77.6%
4fqdA01 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.53 44.0 3.17e-01 93.1% 69.0%
4c9yA00 1.10.10.1890 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ska1 microtubule binding domain-like 0.53 41.0 3.56e-01 87.5% 96.7%
3ec6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 44.0 3.73e-01 100.0% 84.4%
4cvbA00 2.140.10.10 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Quinoprotein alcohol dehydrogenase-like superfamily 0.51 39.0 2.40e-01 87.5% 29.5%
2htiA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 41.0 3.57e-01 95.8% 77.0%
2eqaA01 3.90.870.10 Alpha Beta › Alpha-Beta Complex › DHBP synthase › DHBP synthase 0.50 38.0 2.80e-01 83.3% 71.2%
ECOD (96)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3952678 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.86 75.0 6.93e-01 94.4% 95.6%
3603735 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.86 80.0 6.12e-01 100.0% 50.0%
5022297 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.80 71.0 6.42e-01 95.8% 77.9%
4997602 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.79 65.0 5.73e-01 88.9% 82.9%
4127810 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.77 72.0 5.94e-01 100.0% 94.2%
4978366 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.77 66.0 6.75e-01 93.1% 97.1%
4160031 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.77 68.0 5.77e-01 97.2% 73.0%
5023543 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.76 68.0 6.04e-01 97.2% 77.0%
4993810 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.76 69.0 5.79e-01 100.0% 98.3%
5029252 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.76 66.0 5.56e-01 95.8% 71.7%
4997777 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.76 61.0 5.85e-01 88.9% 82.4%
4234478 5104.1.1.1 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 0.76 53.0 4.55e-01 73.6% 65.8%
4978265 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.76 69.0 5.23e-01 100.0% 97.5%
4288172 242.1.1.6 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA 0.75 66.0 5.38e-01 95.8% 60.8%
4997778 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.75 66.0 5.17e-01 95.8% 55.9%
4982212 5104.1.1.0 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases 0.75 54.0 4.49e-01 75.0% 66.7%
4122987 5104.1.1.1 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 0.75 53.0 4.55e-01 75.0% 67.0%
4943246 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.75 66.0 5.88e-01 97.2% 74.0%
4994374 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.75 66.0 5.52e-01 97.2% 80.0%
4933638 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.74 65.0 5.18e-01 95.8% 100.0%
4096150 242.1.1.6 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA 0.74 64.0 5.34e-01 95.8% 64.0%
4993381 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.74 59.0 5.49e-01 86.1% 98.9%
4142447 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.74 64.0 5.74e-01 95.8% 84.0%
3949652 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.74 64.0 5.55e-01 95.8% 75.5%
5008353 241.1.1.0 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.74 52.0 4.35e-01 73.6% 50.0%
4978474 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.74 66.0 5.34e-01 100.0% 86.7%
4998403 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.74 65.0 5.57e-01 97.2% 65.5%
5028300 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.73 60.0 5.65e-01 91.7% 74.1%
4938256 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.73 65.0 6.40e-01 95.8% 92.0%
4997606 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.73 66.0 5.10e-01 100.0% 72.9%
4277614 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.73 63.0 5.45e-01 95.8% 77.3%
3604140 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.73 65.0 4.82e-01 100.0% 77.3%
4999898 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.73 61.0 5.67e-01 91.7% 82.2%
4626502 242.1.1.6 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA 0.72 63.0 5.21e-01 95.8% 63.2%
4978472 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.72 58.0 5.32e-01 88.9% 91.6%
4080330 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.72 63.0 5.67e-01 97.2% 82.0%
5027653 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.71 62.0 5.41e-01 97.2% 67.3%
4609849 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.71 57.0 5.29e-01 87.5% 81.1%
5015326 328.5.1.0 a+b two layers › IF3-like › SirA-like › SirA-like 0.71 51.0 5.36e-01 94.4% 83.1%
4342313 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.71 61.0 5.52e-01 97.2% 80.0%
4990838 5104.1.1.1 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 0.71 49.0 4.30e-01 73.6% 68.2%
3602727 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.70 57.0 5.36e-01 90.3% 84.4%
4244535 5104.1.1.0 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases 0.70 50.0 3.77e-01 75.0% 44.5%
4128067 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.70 62.0 5.34e-01 97.2% 74.5%
4950410 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.70 57.0 5.54e-01 90.3% 85.0%
3603717 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.70 58.0 5.60e-01 91.7% 81.2%
3596774 225.1.1.0 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.69 56.0 4.76e-01 88.9% 64.2%
5058449 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.69 60.0 5.17e-01 97.2% 78.3%
4658845 2006.1.1.11 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 0.69 56.0 3.86e-01 87.5% 29.8%
4006693 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.69 56.0 5.31e-01 87.5% 81.2%
5065934 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.69 56.0 5.35e-01 90.3% 91.8%
4059572 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.69 61.0 5.27e-01 97.2% 71.8%
3270632 310.2.1.1 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF 0.69 53.0 3.91e-01 83.3% 36.7%
3955112 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.68 59.0 5.45e-01 94.4% 75.6%
4050037 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.68 60.0 5.34e-01 97.2% 79.0%
4587247 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.68 58.0 5.37e-01 93.1% 76.7%
4458167 5104.1.1.1 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 0.68 48.0 3.72e-01 75.0% 46.7%
4393748 5104.1.1.1 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 0.68 48.0 4.19e-01 76.4% 68.7%
3609850 310.2.1.1 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF 0.67 55.0 3.95e-01 90.3% 41.0%
3599877 304.25.1.0 a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain 0.66 52.0 3.69e-01 84.7% 50.5%
4339024 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.66 49.0 4.87e-01 79.2% 82.7%
4430901 5104.1.1.1 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 0.66 47.0 4.12e-01 75.0% 70.9%
3964334 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.66 48.0 4.80e-01 77.8% 81.3%
4075173 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.66 52.0 4.63e-01 88.9% 70.9%
4992653 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.66 49.0 5.02e-01 84.7% 84.3%
4964402 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.65 42.0 4.31e-01 84.7% 67.1%
4460268 310.2.1.1 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF 0.65 53.0 3.91e-01 88.9% 35.8%
4030543 310.2.1.1 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF 0.65 54.0 4.06e-01 91.7% 51.4%
3206012 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.64 51.0 4.65e-01 93.1% 64.0%
4509301 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.64 55.0 4.27e-01 95.8% 50.6%
5065170 2003.1.5.42 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_21 0.64 49.0 3.57e-01 81.9% 40.0%
4088598 242.1.1.6 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA 0.64 56.0 4.92e-01 97.2% 69.5%
4362035 310.2.1.1 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF 0.64 50.0 3.74e-01 86.1% 37.8%
3503012 3016.1.1.2 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 0.63 46.0 3.86e-01 76.4% 52.1%
4276586 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.63 52.0 4.54e-01 97.2% 68.3%
4505049 3016.1.1.2 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 0.63 46.0 4.25e-01 79.2% 64.2%
4143106 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.62 43.0 4.41e-01 75.0% 74.3%
4460746 310.2.1.1 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF 0.61 47.0 3.65e-01 87.5% 39.4%
4489615 306.2.1.1 a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor › Arg_repressor_C 0.60 47.0 4.55e-01 97.2% 76.2%
3785289 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.60 48.0 5.06e-01 98.6% 98.5%
4155203 306.2.1.1 a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor › Arg_repressor_C 0.59 47.0 4.52e-01 94.4% 76.5%
4222799 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.59 48.0 3.91e-01 95.8% 50.3%
4983938 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.58 48.0 4.16e-01 97.2% 70.8%
4416214 3016.1.1.2 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 0.57 43.0 4.11e-01 83.3% 68.2%
1192802 3016.1.1.2 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 0.57 44.0 4.03e-01 84.7% 61.6%
4368618 306.2.1.1 a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor › Arg_repressor_C 0.57 45.0 4.38e-01 97.2% 77.5%
3609147 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.56 49.0 4.34e-01 97.2% 70.5%
4031647 306.2.1.1 a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor › Arg_repressor_C 0.56 46.0 4.32e-01 94.4% 72.3%
3988081 306.2.1.1 a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor › Arg_repressor_C 0.56 43.0 4.23e-01 97.2% 79.5%
4936444 2006.1.1.11 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 0.56 44.0 3.17e-01 87.5% 30.0%
4365813 306.2.1.1 a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor › Arg_repressor_C 0.55 43.0 4.13e-01 97.2% 74.7%
4619996 306.2.1.1 a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor › Arg_repressor_C 0.55 43.0 4.20e-01 97.2% 80.0%
4205065 306.2.1.1 a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor › Arg_repressor_C 0.55 42.0 4.16e-01 95.8% 78.8%
2617501 3016.1.1.2 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 0.55 42.0 3.83e-01 84.7% 60.4%
4035959 306.2.1.1 a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor › Arg_repressor_C 0.54 42.0 4.01e-01 97.2% 74.1%
4937620 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.53 42.0 4.26e-01 90.3% 97.1%