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SR-VP_4-6_scaffold_141_476970_prodigal-single.1__X__X__00119
Bact-VirSR-VP_4-6_scaffold_141_476970_prodigal-single.1__X__X__00119
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-101
Domain cluster:
rep: KF626666.1__AHB12107.1__Paz_10__00010__D69-149
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 40.0 | 4.69e-01 | 76.1% | 78.5% |
| 2lccA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 41.0 | 4.45e-01 | 77.2% | 78.9% |
| 1sg5A01 | 2.30.30.400 | Mainly Beta › Roll › SH3 type barrels. › Rof-like | 0.60 | 38.0 | 4.07e-01 | 76.1% | 75.3% |
| 7xpkA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.60 | 43.0 | 3.62e-01 | 73.9% | 53.1% |
| 1tg0A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 37.0 | 4.32e-01 | 73.9% | 92.4% |
| 3vygD00 | 2.30.30.50 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 40.0 | 3.69e-01 | 72.8% | 72.3% |
| 1vw4M01 | 2.30.30.790 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 36.0 | 3.20e-01 | 72.8% | 43.9% |
| 6gbuD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 37.0 | 4.29e-01 | 73.9% | 95.3% |
| 3pieC09 | 2.30.30.750 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 41.0 | 4.03e-01 | 78.3% | 73.7% |
| 1whjA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.54 | 40.0 | 3.93e-01 | 87.0% | 72.5% |
| 3hx8A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 37.0 | 3.35e-01 | 76.1% | 82.8% |
| 3jscA00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 36.0 | 3.56e-01 | 73.9% | 75.0% |
| 4kcaA02 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.50 | 34.0 | 2.28e-01 | 70.7% | 28.5% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3867207 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.68 | 58.0 | 5.82e-01 | 100.0% | 90.5% |
| 5038570 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.66 | 39.0 | 3.60e-01 | 73.9% | 45.8% |
| 3479384 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 42.0 | 3.26e-01 | 70.7% | 59.0% |
| 3600929 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 45.0 | 4.69e-01 | 90.2% | 87.1% |
| 3503000 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 42.0 | 4.38e-01 | 72.8% | 82.4% |
| 3394789 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 38.0 | 3.58e-01 | 73.9% | 53.6% |
| 3385958 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.57 | 39.0 | 4.42e-01 | 72.8% | 92.9% |
| 3582555 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 40.0 | 3.35e-01 | 73.9% | 68.8% |
| 4002655 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 40.0 | 3.49e-01 | 73.9% | 59.3% |
| 3257650 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 38.0 | 3.91e-01 | 72.8% | 75.3% |
| 3501337 | 4.1.1.169 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4819 | 0.56 | 41.0 | 4.35e-01 | 78.3% | 87.5% |
| 3721062 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.56 | 39.0 | 4.01e-01 | 71.7% | 77.6% |
| 4661207 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.55 | 43.0 | 4.42e-01 | 85.9% | 86.7% |
| 4017190 | 4.1.1.305 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26744 | 0.54 | 37.0 | 3.44e-01 | 70.7% | 89.2% |
| 3690825 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.54 | 41.0 | 2.69e-01 | 81.5% | 91.9% |
| 3476563 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 37.0 | 3.46e-01 | 71.7% | 77.5% |
| 3213653 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.54 | 37.0 | 3.96e-01 | 71.7% | 92.5% |
| 3926817 | 219.1.1.25 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › LRAT | 0.53 | 37.0 | 3.12e-01 | 72.8% | 43.2% |
| 4529160 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 37.0 | 3.55e-01 | 72.8% | 74.3% |
| 4000801 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.52 | 38.0 | 3.48e-01 | 77.2% | 76.8% |
| 3631248 | 220.1.1.20 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH | 0.52 | 36.0 | 3.31e-01 | 72.8% | 87.2% |
| 3272303 | 206.1.2.4 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › Ins_P5_2-kin | 0.52 | 39.0 | 2.57e-01 | 80.4% | 94.2% |
| 3612182 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 36.0 | 3.72e-01 | 73.9% | 94.4% |
| 3922973 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.51 | 38.0 | 2.69e-01 | 79.3% | 24.7% |
| 3924550 | 4026.1.1.0 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) | 0.50 | 35.0 | 2.97e-01 | 71.7% | 80.6% |