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SR-VP_4-6_scaffold_141_476970_prodigal-single.1__X__X__00195
Bact-VirSR-VP_4-6_scaffold_141_476970_prodigal-single.1__X__X__00195
Identity
- Kingdom:
- phage
Quality
91.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-89
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ej9A02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.88 | 45.0 | 6.00e-01 | 96.6% | 91.8% |
| 7afrX02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.82 | 47.0 | 5.69e-01 | 98.9% | 85.0% |
| 3h8zA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 39.0 | 4.99e-01 | 92.0% | 89.6% |
| 2e70A00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 42.0 | 4.65e-01 | 98.9% | 67.6% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 41.0 | 4.54e-01 | 97.7% | 66.7% |
| 2hbpA00 | 2.30.30.700 | Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 | 0.76 | 44.0 | 4.99e-01 | 97.7% | 77.3% |
| 3fgtA01 | 2.10.70.60 | Mainly Beta › Ribbon › Complement Module; domain 1 › Phospholipase B-like, domain 1 | 0.75 | 26.0 | 3.32e-01 | 100.0% | 50.9% |
| 5i4eA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.74 | 36.0 | 4.91e-01 | 92.0% | 91.3% |
| 2do3A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 41.0 | 5.15e-01 | 98.9% | 94.1% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.74 | 40.0 | 5.04e-01 | 97.7% | 90.4% |
| 4ytlA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 40.0 | 4.97e-01 | 96.6% | 94.0% |
| 2e6zA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 41.0 | 4.82e-01 | 95.5% | 83.1% |
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.72 | 38.0 | 4.87e-01 | 96.6% | 93.8% |
| 3c4sA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 43.0 | 5.13e-01 | 98.9% | 93.0% |
| 2d9tA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 40.0 | 5.08e-01 | 96.6% | 100.0% |
| 2vb6A01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.70 | 40.0 | 4.93e-01 | 98.9% | 92.6% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 38.0 | 4.32e-01 | 98.9% | 75.0% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 38.0 | 4.51e-01 | 96.6% | 85.7% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 39.0 | 4.18e-01 | 100.0% | 69.9% |
| 2fb7A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 49.0 | 5.19e-01 | 100.0% | 87.5% |
| 2rqrA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 42.0 | 3.77e-01 | 98.9% | 51.3% |
| 1x6bA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 41.0 | 4.64e-01 | 97.7% | 92.2% |
| 3fb9B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 40.0 | 4.15e-01 | 100.0% | 70.2% |
| 2dl5A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 39.0 | 4.09e-01 | 96.6% | 76.9% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 40.0 | 4.47e-01 | 98.9% | 92.6% |
| 4qy7A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 45.0 | 4.60e-01 | 85.2% | 100.0% |
| 1y71A00 | 2.30.30.430 | Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain | 0.57 | 39.0 | 3.65e-01 | 98.9% | 56.9% |
| 2ew0A00 | 3.40.1740.10 | Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like | 0.57 | 50.0 | 4.03e-01 | 100.0% | 81.7% |
| 3vxcA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.56 | 39.0 | 2.98e-01 | 73.9% | 76.1% |
| 3t91B00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.53 | 39.0 | 3.02e-01 | 79.5% | 71.7% |
ECOD (66)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4058174 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.89 | 50.0 | 5.83e-01 | 100.0% | 76.9% |
| 5025104 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.88 | 49.0 | 6.39e-01 | 100.0% | 98.0% |
| 4368811 | 4.1.1.364 ↗ | beta barrels › SH3 › SH3 › SH3 › GatD_N | 0.87 | 47.0 | 5.95e-01 | 100.0% | 87.3% |
| 4973749 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.85 | 46.0 | 5.11e-01 | 97.7% | 67.1% |
| 3604145 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.85 | 48.0 | 5.78e-01 | 98.9% | 83.3% |
| 4953054 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.85 | 48.0 | 5.20e-01 | 98.9% | 66.7% |
| 4985969 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.84 | 47.0 | 5.72e-01 | 98.9% | 83.3% |
| 4646501 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 46.0 | 3.75e-01 | 100.0% | 31.6% |
| 4499953 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.82 | 45.0 | 5.38e-01 | 100.0% | 80.0% |
| 5001903 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 46.0 | 5.21e-01 | 98.9% | 71.4% |
| 4936291 | 4.1.1.487 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7205 | 0.81 | 47.0 | 5.47e-01 | 98.9% | 80.0% |
| 4949848 | 4.1.1.364 ↗ | beta barrels › SH3 › SH3 › SH3 › GatD_N | 0.79 | 43.0 | 5.28e-01 | 100.0% | 85.5% |
| 3964733 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 43.0 | 5.25e-01 | 100.0% | 85.5% |
| 3782826 | 4.1.1.39 ↗ | beta barrels › SH3 › SH3 › SH3 › SHD1 | 0.77 | 44.0 | 4.76e-01 | 97.7% | 66.7% |
| 4225787 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.76 | 52.0 | 4.97e-01 | 100.0% | 62.0% |
| 4555816 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 50.0 | 5.10e-01 | 100.0% | 69.4% |
| 4029082 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 39.0 | 4.95e-01 | 96.6% | 88.0% |
| 4069560 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 50.0 | 5.44e-01 | 100.0% | 81.3% |
| 3420348 | 4.1.1.306 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N | 0.74 | 40.0 | 4.85e-01 | 97.7% | 83.6% |
| 3795121 | 4.1.1.110 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 | 0.74 | 41.0 | 4.70e-01 | 98.9% | 73.8% |
| 3673317 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 41.0 | 4.91e-01 | 97.7% | 85.5% |
| 3586487 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 40.0 | 4.13e-01 | 96.6% | 55.3% |
| 3535278 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 40.0 | 4.74e-01 | 96.6% | 78.3% |
| 3474715 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 43.0 | 4.93e-01 | 100.0% | 81.5% |
| 3801650 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 50.0 | 4.98e-01 | 96.6% | 70.0% |
| 3616243 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 40.0 | 4.89e-01 | 98.9% | 87.3% |
| 3299797 | 4.1.1.306 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N | 0.72 | 39.0 | 4.63e-01 | 96.6% | 78.3% |
| 5037849 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.71 | 42.0 | 3.70e-01 | 100.0% | 40.8% |
| 4084190 | 4.1.1.98 ↗ | beta barrels › SH3 › SH3 › SH3 › ProQ_C | 0.71 | 37.0 | 4.41e-01 | 94.3% | 74.6% |
| 3037102 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 39.0 | 4.52e-01 | 96.6% | 75.8% |
| 4340758 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 47.0 | 5.22e-01 | 97.7% | 85.7% |
| 4000280 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 40.0 | 4.87e-01 | 100.0% | 90.9% |
| 3833030 | 4.1.1.187 ↗ | beta barrels › SH3 › SH3 › SH3 › DIRP | 0.70 | 39.0 | 3.35e-01 | 98.9% | 35.6% |
| 3218198 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 37.0 | 4.57e-01 | 94.3% | 83.6% |
| 3913334 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 39.0 | 4.30e-01 | 97.7% | 68.6% |
| 3881119 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.69 | 41.0 | 4.32e-01 | 100.0% | 65.0% |
| 3547084 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.68 | 41.0 | 4.09e-01 | 100.0% | 57.8% |
| 3649741 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.68 | 39.0 | 4.17e-01 | 98.9% | 65.3% |
| 4228570 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 48.0 | 5.09e-01 | 100.0% | 81.2% |
| 3852545 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 39.0 | 4.58e-01 | 100.0% | 83.3% |
| 4073433 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.68 | 47.0 | 4.91e-01 | 100.0% | 78.8% |
| 3817476 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.67 | 37.0 | 4.60e-01 | 96.6% | 94.0% |
| 3517728 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.67 | 40.0 | 4.42e-01 | 100.0% | 74.3% |
| 3922426 | 4.1.1.363 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet, Tudor_FRX1 | 0.67 | 41.0 | 3.73e-01 | 98.9% | 45.8% |
| 3393319 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.66 | 41.0 | 3.79e-01 | 100.0% | 49.1% |
| 3938389 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.66 | 41.0 | 4.22e-01 | 100.0% | 64.7% |
| 3765289 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.66 | 40.0 | 3.97e-01 | 100.0% | 57.8% |
| 3514522 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.65 | 49.0 | 5.27e-01 | 98.9% | 93.3% |
| 3243255 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 45.0 | 4.77e-01 | 89.8% | 84.0% |
| 3998022 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.64 | 38.0 | 4.55e-01 | 98.9% | 92.7% |
| 3276044 | 4.1.1.315 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_12, XRN1_D1 | 0.64 | 45.0 | 2.94e-01 | 98.9% | 17.2% |
| 3261235 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.63 | 40.0 | 4.11e-01 | 100.0% | 67.1% |
| 3587030 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 41.0 | 4.56e-01 | 98.9% | 85.7% |
| 3588727 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 40.0 | 4.41e-01 | 96.6% | 82.9% |
| 3590858 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 38.0 | 4.47e-01 | 93.2% | 91.7% |
| 3588736 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 38.0 | 4.39e-01 | 94.3% | 86.2% |
| 3473407 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 41.0 | 4.39e-01 | 98.9% | 82.7% |
| 4196537 | 4.1.1.52 ↗ | beta barrels › SH3 › SH3 › SH3 › ZapC_C | 0.59 | 37.0 | 4.01e-01 | 94.3% | 76.0% |
| 3354387 | 4.1.1.217 ↗ | beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 | 0.57 | 44.0 | 4.53e-01 | 97.7% | 85.9% |
| 3834112 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.56 | 44.0 | 4.64e-01 | 98.9% | 93.8% |
| 3645395 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.55 | 43.0 | 4.53e-01 | 97.7% | 91.3% |
| 3313139 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.53 | 43.0 | 3.41e-01 | 98.9% | 43.4% |
| 3928711 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 43.0 | 4.43e-01 | 100.0% | 91.8% |
| 3251414 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 40.0 | 3.69e-01 | 100.0% | 63.6% |
| 3228778 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.51 | 36.0 | 3.60e-01 | 92.0% | 72.2% |
| 4968598 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.51 | 40.0 | 3.23e-01 | 90.9% | 94.0% |