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SR-VP_4-6_scaffold_141_476970_prodigal-single.1__X__X__00296
Bact-VirSR-VP_4-6_scaffold_141_476970_prodigal-single.1__X__X__00296
Identity
- Kingdom:
- phage
Quality
48.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 418-482
Domain cluster:
representative
CATH (60)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xigA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 65.0 | 5.83e-01 | 100.0% | 72.5% |
| 1sd4A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 62.0 | 6.26e-01 | 98.5% | 96.9% |
| 2fe3B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 63.0 | 5.81e-01 | 98.5% | 76.5% |
| 3elkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 64.0 | 5.45e-01 | 100.0% | 64.8% |
| 5a48B00 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.71 | 62.0 | 5.53e-01 | 100.0% | 68.8% |
| 5h20A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 62.0 | 5.38e-01 | 100.0% | 66.0% |
| 3l7wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 62.0 | 5.34e-01 | 100.0% | 61.9% |
| 1mzbA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 62.0 | 5.77e-01 | 100.0% | 80.5% |
| 3mwmA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 60.0 | 5.82e-01 | 100.0% | 88.0% |
| 2z99A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 61.0 | 5.51e-01 | 100.0% | 72.4% |
| 1p6rA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 60.0 | 5.59e-01 | 100.0% | 78.0% |
| 1u5tA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 60.0 | 5.79e-01 | 98.5% | 89.3% |
| 4esbA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 61.0 | 5.27e-01 | 100.0% | 67.0% |
| 2do7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 60.0 | 5.70e-01 | 100.0% | 81.2% |
| 4hw0C00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 54.0 | 4.87e-01 | 100.0% | 61.3% |
| 1tbxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 58.0 | 5.27e-01 | 100.0% | 70.0% |
| 2vqcA00 | 1.10.10.1470 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › F-112 protein-like | 0.69 | 59.0 | 5.84e-01 | 100.0% | 91.4% |
| 3m8eA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 59.0 | 5.12e-01 | 100.0% | 62.4% |
| 2v1nA01 | 1.10.10.2030 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA/RNA-binding protein Kin17, conserved domain | 0.68 | 58.0 | 5.11e-01 | 100.0% | 71.3% |
| 3o2pE00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 59.0 | 5.46e-01 | 100.0% | 75.6% |
| 2co5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 57.0 | 5.18e-01 | 100.0% | 71.7% |
| 3zcoA00 | 1.10.10.2450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.67 | 57.0 | 4.69e-01 | 100.0% | 77.2% |
| 1ub9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 56.0 | 4.90e-01 | 100.0% | 62.0% |
| 7txnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 51.0 | 4.66e-01 | 100.0% | 63.3% |
| 2hoeA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 52.0 | 5.44e-01 | 98.5% | 100.0% |
| 5iceA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 56.0 | 4.94e-01 | 100.0% | 64.4% |
| 1u5tB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 54.0 | 5.40e-01 | 100.0% | 94.2% |
| 2a07J00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 55.0 | 5.16e-01 | 100.0% | 84.3% |
| 1mvfD00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.64 | 33.0 | 3.83e-01 | 98.5% | 68.2% |
| 3n89A02 | 3.30.310.210 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.64 | 43.0 | 3.41e-01 | 83.1% | 32.8% |
| 3t5xA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 50.0 | 4.89e-01 | 90.8% | 87.5% |
| 1xocA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.63 | 43.0 | 3.31e-01 | 100.0% | 30.3% |
| 2grvA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.63 | 44.0 | 3.31e-01 | 100.0% | 28.2% |
| 2l48A00 | 3.30.70.2030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 40.0 | 3.73e-01 | 86.2% | 50.6% |
| 3jamK00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 55.0 | 4.87e-01 | 100.0% | 69.8% |
| 4asnA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 52.0 | 4.81e-01 | 100.0% | 72.2% |
| 2lfvA00 | 3.30.70.1070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat | 0.61 | 35.0 | 2.98e-01 | 78.5% | 33.0% |
| 5mmjh01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.61 | 49.0 | 4.75e-01 | 100.0% | 77.3% |
| 4c9yA00 | 1.10.10.1890 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ska1 microtubule binding domain-like | 0.61 | 52.0 | 4.28e-01 | 98.5% | 75.6% |
| 2pt7G02 | 3.30.1370.180 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.59 | 49.0 | 4.88e-01 | 98.5% | 91.0% |
| 1yfbA00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.59 | 31.0 | 3.44e-01 | 100.0% | 59.6% |
| 2qyoA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 51.0 | 3.47e-01 | 100.0% | 37.3% |
| 2ph7A01 | 1.10.3400.10 | Mainly Alpha › Orthogonal Bundle › af_2093 domain like fold › af_2093 domain like | 0.59 | 49.0 | 4.12e-01 | 100.0% | 58.9% |
| 8k5lA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 50.0 | 3.58e-01 | 98.5% | 46.0% |
| 3gkuA03 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.58 | 47.0 | 4.59e-01 | 100.0% | 84.5% |
| 6i6lA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 47.0 | 3.30e-01 | 100.0% | 36.8% |
| 5x7fA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 48.0 | 3.45e-01 | 100.0% | 32.3% |
| 2hnkA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 48.0 | 3.37e-01 | 100.0% | 31.9% |
| 2avdA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 48.0 | 3.39e-01 | 100.0% | 33.3% |
| 1i94H01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.56 | 46.0 | 4.38e-01 | 100.0% | 78.2% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.56 | 46.0 | 4.11e-01 | 100.0% | 64.9% |
| 4oevA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.55 | 45.0 | 3.48e-01 | 92.3% | 83.2% |
| 3c3pA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 44.0 | 3.19e-01 | 100.0% | 29.8% |
| 3c0wA02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.54 | 46.0 | 4.03e-01 | 100.0% | 74.8% |
| 2m9kA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.54 | 37.0 | 3.30e-01 | 86.2% | 49.5% |
| 1x19A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 43.0 | 3.36e-01 | 100.0% | 38.1% |
| 2zihC00 | 1.10.3630.10 | Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like | 0.53 | 45.0 | 3.03e-01 | 100.0% | 51.3% |
| 4obxA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 43.0 | 3.05e-01 | 100.0% | 43.4% |
| 2x24A02 | 2.40.460.10 | Mainly Beta › Beta Barrel › ClpP/crotonase fold › Biotin dependent carboxylase carboxyltransferase | 0.52 | 41.0 | 4.10e-01 | 98.5% | 86.4% |
| 4c0kA02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.52 | 40.0 | 2.98e-01 | 95.4% | 29.8% |
ECOD (87)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4939871 | 101.1.2.896 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF2551 | 0.81 | 74.0 | 6.21e-01 | 100.0% | 63.8% |
| 4972865 | 101.1.2.896 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF2551 | 0.81 | 73.0 | 6.02e-01 | 100.0% | 58.4% |
| 5021360 | 101.1.2.896 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF2551 | 0.79 | 72.0 | 6.46e-01 | 100.0% | 73.0% |
| 5058268 | 101.1.2.54 ↗ | alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R | 0.75 | 66.0 | 5.49e-01 | 100.0% | 59.1% |
| 4955611 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.74 | 65.0 | 5.57e-01 | 100.0% | 61.5% |
| 4947811 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 65.0 | 5.38e-01 | 100.0% | 55.7% |
| 4026717 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 65.0 | 6.36e-01 | 100.0% | 94.3% |
| 4937876 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.73 | 65.0 | 5.25e-01 | 100.0% | 52.0% |
| 4125762 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.73 | 65.0 | 5.19e-01 | 100.0% | 50.0% |
| 5029803 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 63.0 | 5.13e-01 | 100.0% | 54.6% |
| 3958566 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.73 | 64.0 | 5.78e-01 | 100.0% | 72.2% |
| 4964386 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 63.0 | 5.63e-01 | 100.0% | 68.4% |
| 5032747 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.73 | 63.0 | 5.26e-01 | 98.5% | 55.7% |
| 5064203 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 63.0 | 5.71e-01 | 100.0% | 72.2% |
| 5044327 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 64.0 | 5.55e-01 | 100.0% | 66.0% |
| 4987122 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 60.0 | 6.08e-01 | 96.9% | 93.8% |
| 3518446 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 56.0 | 5.93e-01 | 96.9% | 100.0% |
| 5076521 | 101.1.2.54 ↗ | alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R | 0.72 | 63.0 | 5.05e-01 | 100.0% | 50.8% |
| 5031076 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.72 | 62.0 | 5.18e-01 | 100.0% | 55.7% |
| 5043608 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 62.0 | 6.20e-01 | 100.0% | 95.6% |
| 5030252 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.71 | 62.0 | 5.41e-01 | 100.0% | 64.0% |
| 4990274 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.71 | 63.0 | 5.35e-01 | 100.0% | 61.0% |
| 5028427 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.71 | 62.0 | 5.34e-01 | 100.0% | 61.9% |
| 4593646 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 62.0 | 5.60e-01 | 100.0% | 74.4% |
| 4948272 | 101.1.2.26 ↗ | alpha arrays › HTH › HTH › winged helix domain › HxlR | 0.71 | 61.0 | 5.70e-01 | 98.5% | 78.3% |
| 3938080 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 61.0 | 5.56e-01 | 100.0% | 86.7% |
| 1935905 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.71 | 62.0 | 4.90e-01 | 100.0% | 48.2% |
| 5035624 | 101.1.2.54 ↗ | alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R | 0.71 | 62.0 | 5.71e-01 | 100.0% | 77.6% |
| 4975130 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.71 | 62.0 | 5.49e-01 | 100.0% | 70.5% |
| 4977780 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 61.0 | 4.09e-01 | 100.0% | 70.0% |
| 3880787 | 101.1.2.526 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27602 | 0.71 | 62.0 | 5.26e-01 | 100.0% | 62.7% |
| 3539519 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 62.0 | 5.39e-01 | 100.0% | 68.0% |
| 4426239 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.70 | 61.0 | 4.77e-01 | 100.0% | 44.8% |
| 3942501 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 61.0 | 5.52e-01 | 100.0% | 80.0% |
| 5075194 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 61.0 | 5.12e-01 | 100.0% | 56.5% |
| 4961853 | 101.1.2.54 ↗ | alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R | 0.70 | 61.0 | 5.85e-01 | 100.0% | 86.7% |
| None | — | 0.70 | 61.0 | 4.94e-01 | 100.0% | 51.9% | |
| 3988732 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.70 | 62.0 | 5.25e-01 | 100.0% | 60.2% |
| 3890162 | 101.1.2.526 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27602 | 0.70 | 62.0 | 5.92e-01 | 100.0% | 90.7% |
| 5053868 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 55.0 | 5.80e-01 | 92.3% | 100.0% |
| 3587554 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.69 | 60.0 | 5.29e-01 | 100.0% | 66.0% |
| 3279756 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.69 | 59.0 | 4.73e-01 | 100.0% | 47.1% |
| 164077 | 101.1.2.127 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 | 0.69 | 60.0 | 5.27e-01 | 100.0% | 64.4% |
| 5047445 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 60.0 | 4.96e-01 | 100.0% | 60.0% |
| 4022486 | 101.1.2.374 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM4_WHD | 0.69 | 59.0 | 5.42e-01 | 100.0% | 76.7% |
| 4983310 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.69 | 60.0 | 5.28e-01 | 100.0% | 65.0% |
| 5063930 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 59.0 | 5.39e-01 | 100.0% | 76.7% |
| 4506987 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.69 | 59.0 | 4.60e-01 | 100.0% | 44.0% |
| 4934807 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.68 | 36.0 | 3.43e-01 | 100.0% | 42.7% |
| 4998174 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.68 | 60.0 | 4.38e-01 | 100.0% | 38.9% |
| 3693280 | 101.1.2.271 ↗ | alpha arrays › HTH › HTH › winged helix domain › B-block_TFIIIC | 0.68 | 59.0 | 5.24e-01 | 100.0% | 67.4% |
| 4229465 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 59.0 | 5.58e-01 | 100.0% | 83.7% |
| 4625029 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.68 | 59.0 | 5.10e-01 | 100.0% | 65.7% |
| 4982834 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 52.0 | 4.99e-01 | 96.9% | 71.2% |
| 4119447 | 109.4.1.292 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › eIF3a_PCI_TPR-like | 0.68 | 59.0 | 3.49e-01 | 100.0% | 12.7% |
| 4965014 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 58.0 | 5.74e-01 | 100.0% | 92.9% |
| 4631918 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 57.0 | 5.55e-01 | 100.0% | 86.7% |
| 2685 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 57.0 | 5.24e-01 | 100.0% | 74.2% |
| 3167236 | 148.1.3.31 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM4_WHD | 0.67 | 57.0 | 5.30e-01 | 100.0% | 77.6% |
| 3264668 | 101.1.2.304 ↗ | alpha arrays › HTH › HTH › winged helix domain › E3_UFM1_ligase | 0.67 | 56.0 | 5.42e-01 | 100.0% | 84.0% |
| 4976651 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 56.0 | 5.53e-01 | 100.0% | 98.6% |
| 5032296 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.66 | 35.0 | 3.73e-01 | 100.0% | 58.2% |
| 3216573 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 56.0 | 4.62e-01 | 100.0% | 68.8% |
| 4012878 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 55.0 | 4.65e-01 | 100.0% | 61.7% |
| 3995114 | 101.1.2.164 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFA2_Winged_2 | 0.64 | 52.0 | 4.47e-01 | 100.0% | 55.5% |
| 3432388 | 109.4.1.43 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SAC3_GANP | 0.63 | 53.0 | 4.18e-01 | 100.0% | 46.7% |
| 5031005 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.62 | 33.0 | 3.49e-01 | 100.0% | 56.4% |
| 4936825 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.61 | 33.0 | 3.59e-01 | 100.0% | 62.0% |
| 4995085 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 49.0 | 4.46e-01 | 98.5% | 77.9% |
| 4982519 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.59 | 32.0 | 3.48e-01 | 100.0% | 62.0% |
| 3173552 | 101.1.2.535 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF25889 | 0.59 | 50.0 | 4.06e-01 | 100.0% | 79.3% |
| 4987210 | 2003.1.5.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_2 | 0.59 | 50.0 | 3.53e-01 | 100.0% | 38.4% |
| 3334081 | 2003.1.5.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_2 | 0.58 | 49.0 | 3.74e-01 | 100.0% | 54.3% |
| 3588406 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 47.0 | 4.78e-01 | 98.5% | 100.0% |
| 5049735 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.58 | 49.0 | 3.13e-01 | 100.0% | 25.5% |
| 4933873 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.57 | 30.0 | 3.21e-01 | 100.0% | 56.4% |
| 3471082 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.56 | 49.0 | 4.17e-01 | 100.0% | 67.0% |
| None | — | 0.56 | 48.0 | 3.37e-01 | 100.0% | 31.9% | |
| 4984774 | 2004.1.1.14 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU | 0.56 | 40.0 | 2.71e-01 | 76.9% | 33.8% |
| 3243754 | 390.1.1.7 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_3 | 0.55 | 34.0 | 3.13e-01 | 83.1% | 42.1% |
| 5061659 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 46.0 | 4.47e-01 | 100.0% | 92.0% |
| None | — | 0.55 | 47.0 | 3.34e-01 | 100.0% | 32.4% | |
| 3452826 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 43.0 | 3.49e-01 | 100.0% | 43.0% |
| 3578641 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.54 | 36.0 | 3.57e-01 | 84.6% | 64.3% |
| None | — | 0.53 | 44.0 | 3.11e-01 | 100.0% | 44.2% | |
| 5256 | 304.8.1.10 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 | 0.53 | 36.0 | 3.65e-01 | 83.1% | 71.2% |
| 4142128 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.52 | 34.0 | 3.04e-01 | 83.1% | 44.0% |
D2
medium
residues 675-742
Domain cluster:
representative
CATH (52)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d5lA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 51.0 | 5.66e-01 | 86.8% | 100.0% |
| 3vkgA09 | 1.20.920.30 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.70 | 51.0 | 4.00e-01 | 85.3% | 36.8% |
| 1i5nB00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.69 | 58.0 | 4.74e-01 | 95.6% | 50.8% |
| 2kmfA01 | 1.20.58.810 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Photosystem II Pbs27 | 0.69 | 59.0 | 5.14e-01 | 95.6% | 72.5% |
| 2v6yA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.69 | 59.0 | 5.71e-01 | 95.6% | 90.7% |
| 2xvtC00 | 1.10.150.510 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Receptor activity modifying family | 0.68 | 57.0 | 5.45e-01 | 94.1% | 91.1% |
| 2gscC00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.67 | 57.0 | 4.91e-01 | 95.6% | 66.4% |
| 3fbzA01 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 56.0 | 4.87e-01 | 91.2% | 60.8% |
| 1tqgA00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.67 | 56.0 | 4.92e-01 | 95.6% | 63.8% |
| 5x56B00 | 1.20.58.810 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Photosystem II Pbs27 | 0.67 | 57.0 | 4.99e-01 | 97.1% | 71.4% |
| 3e3vA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 49.0 | 5.24e-01 | 86.8% | 96.4% |
| 2gz4A00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.66 | 56.0 | 4.01e-01 | 95.6% | 79.5% |
| 4f53A00 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.65 | 58.0 | 3.47e-01 | 100.0% | 22.5% |
| 4p63D00 | 3.40.910.10 | Alpha Beta › 3-Layer(aba) Sandwich › Deoxyhypusine Synthase › Deoxyhypusine synthase | 0.65 | 51.0 | 3.31e-01 | 85.3% | 89.4% |
| 2jx0A00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.65 | 55.0 | 4.47e-01 | 95.6% | 57.3% |
| 3cxbA03 | 1.10.1740.30 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Secreted effector protein SifA helical domain | 0.64 | 44.0 | 4.20e-01 | 73.5% | 60.5% |
| 2fozA00 | 1.10.4080.10 | Mainly Alpha › Orthogonal Bundle › ADP-ribosylglycohydrolase fold › ADP-ribosylation/Crystallin J1 | 0.64 | 53.0 | 3.43e-01 | 94.1% | 31.3% |
| 2a9uA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.63 | 55.0 | 4.55e-01 | 98.5% | 56.3% |
| 2fjcB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.63 | 52.0 | 4.09e-01 | 95.6% | 87.2% |
| 1s7zA01 | 1.20.120.780 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DNA mimic ocr | 0.63 | 51.0 | 4.45e-01 | 88.2% | 92.1% |
| 3ecsC01 | 1.20.120.1070 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Translation initiation factor eIF-2B, N-terminal domain | 0.62 | 50.0 | 4.44e-01 | 89.7% | 67.0% |
| 1a41A02 | 1.20.120.380 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Type 1-topoisomerase catalytic fragment, domain 2 | 0.62 | 51.0 | 4.63e-01 | 91.2% | 67.0% |
| 3oxfA05 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.62 | 51.0 | 4.98e-01 | 97.1% | 85.3% |
| 2vqgA00 | 1.10.10.1280 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Alpha-helical porin B/porin C | 0.61 | 42.0 | 4.06e-01 | 72.1% | 67.1% |
| 2c5uA02 | 1.10.3550.20 | Mainly Alpha › Orthogonal Bundle › eoxyguanosinetriphosphate triphosphohydrolase fold › | 0.60 | 45.0 | 3.67e-01 | 91.2% | 41.2% |
| 3rv0C02 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.60 | 43.0 | 3.36e-01 | 75.0% | 69.4% |
| 6hftA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.60 | 50.0 | 4.12e-01 | 95.6% | 50.4% |
| 2khmA01 | 1.10.10.1350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain | 0.59 | 51.0 | 4.46e-01 | 98.5% | 88.9% |
| 3vtxB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.59 | 46.0 | 3.42e-01 | 100.0% | 32.2% |
| 8sorA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.59 | 50.0 | 3.28e-01 | 100.0% | 27.7% |
| 4kw3A00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.59 | 50.0 | 3.36e-01 | 95.6% | 53.4% |
| 1hlvA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.58 | 42.0 | 4.45e-01 | 88.2% | 91.7% |
| 2np5D00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.58 | 49.0 | 3.85e-01 | 100.0% | 60.1% |
| 4ye6A02 | 1.10.10.2420 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.57 | 42.0 | 4.43e-01 | 89.7% | 94.8% |
| 1txuA02 | 1.20.1050.80 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › VPS9 domain | 0.57 | 48.0 | 3.77e-01 | 98.5% | 63.7% |
| 3k6hA01 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.57 | 40.0 | 2.99e-01 | 73.5% | 68.9% |
| 3bvxA02 | 1.20.1270.50 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Glycoside hydrolase family 38, central domain | 0.57 | 40.0 | 3.44e-01 | 76.5% | 45.9% |
| 3uj9A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 46.0 | 3.21e-01 | 94.1% | 88.8% |
| 2ph7A01 | 1.10.3400.10 | Mainly Alpha › Orthogonal Bundle › af_2093 domain like fold › af_2093 domain like | 0.56 | 45.0 | 3.83e-01 | 94.1% | 84.7% |
| 1urvA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.56 | 46.0 | 3.73e-01 | 100.0% | 67.5% |
| 6fhpD00 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.55 | 41.0 | 4.28e-01 | 85.3% | 90.3% |
| 1pieA01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.55 | 45.0 | 3.20e-01 | 91.2% | 40.3% |
| 1fcqA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 47.0 | 3.10e-01 | 100.0% | 22.3% |
| 2ajrA01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.54 | 47.0 | 3.16e-01 | 97.1% | 38.5% |
| 1vw4L02 | 1.10.246.170 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.54 | 47.0 | 4.39e-01 | 98.5% | 91.8% |
| 2zs0A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.54 | 45.0 | 3.71e-01 | 100.0% | 68.6% |
| 6rxaA01 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.54 | 41.0 | 3.82e-01 | 89.7% | 64.4% |
| 3wctD00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.54 | 44.0 | 3.63e-01 | 100.0% | 66.0% |
| 1oj6A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.53 | 45.0 | 3.62e-01 | 100.0% | 72.1% |
| 5mswA01 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.53 | 42.0 | 3.88e-01 | 91.2% | 94.6% |
| 3ddhA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.51 | 41.0 | 3.92e-01 | 94.1% | 75.3% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.51 | 42.0 | 3.77e-01 | 91.2% | 67.0% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4224659 | 191.1.1.10 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_6 | 0.77 | 68.0 | 5.13e-01 | 100.0% | 77.6% |
| 3438249 | 601.18.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 | 0.75 | 64.0 | 5.61e-01 | 94.1% | 69.0% |
| 3949818 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.71 | 62.0 | 4.81e-01 | 100.0% | 71.0% |
| 3254229 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.68 | 58.0 | 5.68e-01 | 95.6% | 94.7% |
| 4968565 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.68 | 60.0 | 4.09e-01 | 100.0% | 32.8% |
| 4558872 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.67 | 55.0 | 5.16e-01 | 91.2% | 90.4% |
| 3626109 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.66 | 54.0 | 5.37e-01 | 91.2% | 95.7% |
| 5001408 | 4995.1.1.0 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like | 0.65 | 56.0 | 5.02e-01 | 100.0% | 87.0% |
| 4012148 | 604.13.1.0 ↗ | alpha bundles › Spectrin repeat-like › USP8 N-terminal domain-like › USP8 N-terminal domain-like | 0.65 | 55.0 | 4.65e-01 | 95.6% | 67.8% |
| 4939273 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.65 | 54.0 | 5.36e-01 | 92.6% | 94.3% |
| 3185106 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 44.0 | 4.30e-01 | 85.3% | 65.3% |
| 3280988 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.64 | 52.0 | 5.02e-01 | 92.6% | 88.7% |
| 4951356 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 54.0 | 3.95e-01 | 100.0% | 42.4% |
| 3421325 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.63 | 55.0 | 5.16e-01 | 92.6% | 86.3% |
| 4969504 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.63 | 51.0 | 3.85e-01 | 91.2% | 74.3% |
| 3452645 | 101.35.1.31 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › Gliadin | 0.63 | 52.0 | 4.75e-01 | 94.1% | 71.6% |
| 4161600 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.63 | 43.0 | 4.78e-01 | 83.8% | 100.0% |
| 4372227 | 621.1.1.0 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0.63 | 54.0 | 4.51e-01 | 100.0% | 88.0% |
| 2808456 | 3651.1.1.1 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B | 0.63 | 50.0 | 4.37e-01 | 91.2% | 56.5% |
| 3227256 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.62 | 56.0 | 3.88e-01 | 100.0% | 91.6% |
| 3220981 | 601.16.1.3 ↗ | alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase › GIT1_C | 0.62 | 51.0 | 4.48e-01 | 95.6% | 71.8% |
| 3493341 | 109.4.1.1530 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › COG4_m, COG4_C | 0.62 | 52.0 | 3.62e-01 | 100.0% | 56.9% |
| 4599915 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.61 | 48.0 | 4.96e-01 | 91.2% | 89.2% |
| 3512341 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.61 | 48.0 | 4.77e-01 | 85.3% | 94.3% |
| 3583162 | 2498.1.1.3 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M2 | 0.61 | 48.0 | 3.38e-01 | 85.3% | 29.8% |
| 5082325 | 3705.1.1.3 ↗ | alpha arrays › Bacterial chaperone lipoprotein (PulS_OutS) › Bacterial chaperone lipoprotein (PulS_OutS) › Bacterial chaperone lipoprotein (PulS_OutS) › Phage_holin_6_1 | 0.61 | 47.0 | 4.73e-01 | 86.8% | 90.0% |
| 4073017 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.61 | 45.0 | 4.94e-01 | 91.2% | 100.0% |
| 4456702 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.60 | 51.0 | 4.33e-01 | 92.6% | 68.2% |
| 4320970 | 109.4.1.1453 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_17 | 0.60 | 51.0 | 3.55e-01 | 100.0% | 26.7% |
| 4955506 | 2003.1.5.444 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DUF1156 | 0.60 | 51.0 | 3.15e-01 | 100.0% | 39.5% |
| 184733 | 3640.1.1.1 ↗ | alpha duplicates or obligate multimers › Minor ampullate fibroin 1 C-terminal domain › Minor ampullate fibroin 1 C-terminal domain › Minor ampullate fibroin 1 C-terminal domain › Spidroin_MaSp | 0.59 | 51.0 | 4.12e-01 | 98.5% | 68.6% |
| 3712841 | 3932.1.1.0 ↗ | alpha bundles › CRISPR/Cas system-associated protein Csm6 6H domain › CRISPR/Cas system-associated protein Csm6 6H domain › CRISPR/Cas system-associated protein Csm6 6H domain | 0.59 | 46.0 | 4.73e-01 | 95.6% | 95.4% |
| 4115682 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.59 | 48.0 | 4.15e-01 | 92.6% | 69.1% |
| 3224751 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 51.0 | 4.55e-01 | 95.6% | 87.4% |
| 3779604 | 109.4.1.1513 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_8, TPR_17 | 0.58 | 49.0 | 3.60e-01 | 100.0% | 33.7% |
| 3963888 | 5065.1.1.2 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › FecCD | 0.58 | 48.0 | 3.21e-01 | 94.1% | 73.6% |
| 4950795 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.58 | 47.0 | 3.51e-01 | 94.1% | 36.8% |
| 4420734 | 5065.1.1.2 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › FecCD | 0.58 | 48.0 | 3.14e-01 | 94.1% | 70.2% |
| 3935995 | 101.1.2.127 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 | 0.56 | 45.0 | 4.41e-01 | 94.1% | 80.0% |
| 3435662 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.56 | 43.0 | 3.62e-01 | 85.3% | 49.6% |
| 3930038 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.55 | 47.0 | 4.26e-01 | 94.1% | 73.3% |
| 3623380 | 106.1.1.1 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Globin | 0.55 | 46.0 | 3.58e-01 | 100.0% | 58.8% |
| 3988277 | 5065.1.1.2 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › FecCD | 0.55 | 44.0 | 3.00e-01 | 94.1% | 67.1% |
| 51207 | 106.1.1.0 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like | 0.54 | 44.0 | 3.63e-01 | 100.0% | 66.9% |
| 3942475 | 628.1.1.1 ↗ | alpha bundles › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › FCD | 0.53 | 44.0 | 3.48e-01 | 94.1% | 74.2% |
| 4228324 | 2006.1.2.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH | 0.52 | 42.0 | 3.20e-01 | 100.0% | 42.5% |
D3
medium
residues 861-904_935-991
Domain cluster:
representative
CATH (51)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2h41A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 52.0 | 5.41e-01 | 98.0% | 85.3% |
| 5c71A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 53.0 | 5.48e-01 | 100.0% | 86.5% |
| 2w1nA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 49.0 | 5.43e-01 | 97.0% | 92.7% |
| 5z06B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 49.0 | 5.15e-01 | 97.0% | 84.8% |
| 2xwxA03 | 2.60.40.2550 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.66 | 51.0 | 5.19e-01 | 100.0% | 83.7% |
| 1svdM00 | 3.30.190.10 | Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit | 0.65 | 52.0 | 5.13e-01 | 92.1% | 79.6% |
| 5mz2I00 | 3.30.190.10 | Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit | 0.65 | 53.0 | 4.77e-01 | 92.1% | 63.3% |
| 6ecaA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 50.0 | 5.19e-01 | 100.0% | 87.4% |
| 4gucA00 | 2.60.40.3720 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.65 | 51.0 | 4.86e-01 | 100.0% | 73.0% |
| 4hljA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 51.0 | 4.94e-01 | 98.0% | 77.7% |
| 2v5yA05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 49.0 | 5.05e-01 | 97.0% | 88.7% |
| 3hxiA01 | 3.30.760.10 | Alpha Beta › 2-Layer Sandwich › RNA Cap, Translation Initiation Factor Eif4e › RNA Cap, Translation Initiation Factor Eif4e | 0.61 | 42.0 | 3.57e-01 | 71.3% | 68.4% |
| 4ll1C02 | 2.60.40.640 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 52.0 | 4.67e-01 | 93.1% | 96.4% |
| 1uenA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 51.0 | 4.77e-01 | 98.0% | 74.4% |
| 3vmnA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 52.0 | 5.07e-01 | 100.0% | 85.6% |
| 3gqcC04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.60 | 47.0 | 4.49e-01 | 85.1% | 84.2% |
| 5abxA00 | 3.30.760.10 | Alpha Beta › 2-Layer Sandwich › RNA Cap, Translation Initiation Factor Eif4e › RNA Cap, Translation Initiation Factor Eif4e | 0.59 | 41.0 | 3.47e-01 | 71.3% | 65.9% |
| 2hgsA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.59 | 42.0 | 4.14e-01 | 74.3% | 77.5% |
| 3obaA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 53.0 | 4.98e-01 | 100.0% | 90.5% |
| 2z04B03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.59 | 43.0 | 3.49e-01 | 76.2% | 54.3% |
| 5h80B03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.59 | 43.0 | 3.16e-01 | 76.2% | 42.2% |
| 1nepA00 | 2.60.40.770 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 53.0 | 4.82e-01 | 97.0% | 76.2% |
| 3bgaA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 53.0 | 5.12e-01 | 100.0% | 90.1% |
| 1rh8A00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.58 | 50.0 | 4.51e-01 | 96.0% | 81.0% |
| 3vvvA00 | 2.60.40.2840 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 46.0 | 4.50e-01 | 100.0% | 80.6% |
| 1jz7A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 52.0 | 5.01e-01 | 100.0% | 90.4% |
| 2z0uA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.57 | 50.0 | 4.66e-01 | 97.0% | 89.1% |
| 3p1vA01 | 2.60.40.3250 | Mainly Beta › Sandwich › Immunoglobulin-like › Peptidase M64, N-terminal domain | 0.57 | 53.0 | 4.73e-01 | 100.0% | 88.4% |
| 2f9wA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.57 | 37.0 | 3.41e-01 | 72.3% | 50.4% |
| 2hdeA01 | 3.10.20.550 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › ASAP complex, SAP18 subunit | 0.57 | 43.0 | 4.09e-01 | 84.2% | 66.7% |
| 5jtwA03 | 2.60.40.1940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 50.0 | 4.69e-01 | 100.0% | 83.5% |
| 4hsaF02 | 2.60.40.2150 | Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 2 | 0.56 | 47.0 | 4.71e-01 | 96.0% | 88.6% |
| 1eerC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 44.0 | 4.55e-01 | 98.0% | 89.7% |
| 1yhpA02 | 2.60.40.1720 | Mainly Beta › Sandwich › Immunoglobulin-like › Calcium-dependent cell adhesion molecule-1 | 0.56 | 42.0 | 4.06e-01 | 100.0% | 69.2% |
| 2iafA00 | 3.30.1330.90 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › D-3-phosphoglycerate dehydrogenase; domain 3 | 0.56 | 50.0 | 4.45e-01 | 97.0% | 92.1% |
| 3mfiA04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.55 | 43.0 | 4.13e-01 | 85.1% | 84.9% |
| 1h7sA01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.55 | 38.0 | 3.15e-01 | 72.3% | 82.4% |
| 1mvpA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.55 | 39.0 | 3.80e-01 | 74.3% | 78.6% |
| 2zkmX04 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.54 | 47.0 | 4.38e-01 | 96.0% | 93.8% |
| 1wscA01 | 3.30.700.20 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Hypothetical protein ph0010; domain 1 | 0.53 | 44.0 | 3.96e-01 | 93.1% | 69.8% |
| 4aefA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 40.0 | 4.14e-01 | 96.0% | 86.3% |
| 3b49A00 | 3.20.80.10 | Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain | 0.53 | 42.0 | 3.38e-01 | 86.1% | 96.1% |
| 6cxhA03 | 2.60.40.1580 | Mainly Beta › Sandwich › Immunoglobulin-like › Particulate methane monooxygenase, b subunit. Chain: A, domain 3 | 0.53 | 47.0 | 4.27e-01 | 100.0% | 89.0% |
| 4htlA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 36.0 | 3.63e-01 | 71.3% | 87.0% |
| 4gwmA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 45.0 | 3.84e-01 | 96.0% | 93.3% |
| 1s3rA04 | 2.60.40.1430 | Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 | 0.51 | 42.0 | 4.07e-01 | 100.0% | 81.1% |
| 2lfuA02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.51 | 36.0 | 3.33e-01 | 72.3% | 96.1% |
| 4hesA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.51 | 46.0 | 3.36e-01 | 100.0% | 99.6% |
| 1d5yB03 | 3.20.80.10 | Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain | 0.51 | 43.0 | 3.63e-01 | 92.1% | 78.6% |
| 3rfrA03 | 2.60.40.1580 | Mainly Beta › Sandwich › Immunoglobulin-like › Particulate methane monooxygenase, b subunit. Chain: A, domain 3 | 0.51 | 45.0 | 4.10e-01 | 100.0% | 86.8% |
| 1xc3A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.50 | 35.0 | 3.55e-01 | 72.3% | 85.4% |
ECOD (65)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3814983 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.73 | 33.0 | 3.78e-01 | 75.2% | 56.0% |
| 3910044 | 11.1.1.21 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Tissue_fac | 0.72 | 57.0 | 5.79e-01 | 99.0% | 85.0% |
| 4144303 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.71 | 56.0 | 4.96e-01 | 100.0% | 58.6% |
| 3608254 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 46.0 | 5.12e-01 | 98.0% | 86.3% |
| 3531848 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.69 | 51.0 | 5.49e-01 | 98.0% | 91.8% |
| 3464233 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.69 | 32.0 | 3.52e-01 | 75.2% | 53.8% |
| 3221204 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.67 | 53.0 | 5.34e-01 | 98.0% | 84.0% |
| 4968165 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 47.0 | 4.85e-01 | 100.0% | 76.8% |
| 4384109 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.67 | 53.0 | 5.60e-01 | 97.0% | 96.6% |
| 4378815 | 302.2.1.1 ↗ | a+b two layers › Reverse ferredoxin › RuBisCO, small subunit › RuBisCO, small subunit › RuBisCO_small | 0.67 | 56.0 | 5.79e-01 | 99.0% | 95.8% |
| 3609926 | 302.1.1.0 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain | 0.67 | 52.0 | 4.81e-01 | 83.2% | 73.1% |
| 3704357 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.66 | 57.0 | 4.11e-01 | 94.1% | 42.1% |
| 4659490 | 302.2.1.1 ↗ | a+b two layers › Reverse ferredoxin › RuBisCO, small subunit › RuBisCO, small subunit › RuBisCO_small | 0.66 | 53.0 | 5.06e-01 | 92.1% | 74.8% |
| 4930836 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 53.0 | 5.40e-01 | 98.0% | 87.0% |
| 3898606 | 11.1.1.217 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Izumo-Ig | 0.66 | 52.0 | 5.37e-01 | 99.0% | 89.5% |
| 4237265 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 54.0 | 5.25e-01 | 89.1% | 85.5% |
| 2157197 | 302.2.1.1 ↗ | a+b two layers › Reverse ferredoxin › RuBisCO, small subunit › RuBisCO, small subunit › RuBisCO_small | 0.65 | 53.0 | 4.77e-01 | 92.1% | 63.3% |
| 3940191 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 54.0 | 5.02e-01 | 97.0% | 72.0% |
| 3502208 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 52.0 | 5.27e-01 | 100.0% | 88.0% |
| 3621296 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.64 | 45.0 | 4.42e-01 | 96.0% | 67.6% |
| 5061498 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 52.0 | 3.62e-01 | 100.0% | 27.4% |
| 3923361 | 11.1.1.41 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C | 0.63 | 57.0 | 4.68e-01 | 97.0% | 88.6% |
| 3431199 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.63 | 50.0 | 3.83e-01 | 96.0% | 37.3% |
| 5056532 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 51.0 | 5.14e-01 | 100.0% | 86.0% |
| 4402197 | 11.1.1.236 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Mannosidase_ig | 0.63 | 51.0 | 5.27e-01 | 95.0% | 92.6% |
| 3793688 | 11.1.1.41 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C | 0.63 | 57.0 | 4.38e-01 | 99.0% | 70.5% |
| 3936535 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 53.0 | 5.31e-01 | 97.0% | 89.5% |
| 4329715 | 11.1.1.14 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 | 0.63 | 50.0 | 5.05e-01 | 96.0% | 86.0% |
| 3177860 | 11.1.5.98 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › SPT23_MGA2_DBD | 0.62 | 57.0 | 4.41e-01 | 100.0% | 83.7% |
| 3815584 | 11.1.1.89 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1223 | 0.62 | 56.0 | 5.11e-01 | 98.0% | 86.2% |
| 3628562 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 53.0 | 4.99e-01 | 100.0% | 77.5% |
| 3587548 | 11.1.1.14 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 | 0.62 | 50.0 | 5.04e-01 | 95.0% | 87.0% |
| 5033327 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 45.0 | 4.85e-01 | 98.0% | 91.8% |
| 2396500 | 11.1.1.236 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Mannosidase_ig | 0.61 | 50.0 | 5.00e-01 | 92.1% | 86.3% |
| 3546856 | 11.1.1.852 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28276 | 0.61 | 54.0 | 4.89e-01 | 99.0% | 83.6% |
| 3213073 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 50.0 | 4.79e-01 | 100.0% | 78.3% |
| 3522685 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 49.0 | 4.62e-01 | 97.0% | 73.3% |
| 4300924 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.60 | 47.0 | 4.55e-01 | 86.1% | 74.8% |
| 4946301 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 47.0 | 4.78e-01 | 98.0% | 86.0% |
| 3536236 | 11.1.1.852 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28276 | 0.60 | 54.0 | 4.93e-01 | 100.0% | 87.4% |
| 5032845 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 52.0 | 4.52e-01 | 94.1% | 100.0% |
| 4663220 | 11.1.1.416 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › SPC22 | 0.60 | 52.0 | 5.07e-01 | 95.0% | 89.1% |
| 3808433 | 11.1.1.37 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › E1_DerP2_DerF2 | 0.59 | 54.0 | 4.82e-01 | 100.0% | 80.7% |
| 5046240 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.59 | 51.0 | 4.82e-01 | 97.0% | 79.2% |
| 3931538 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 48.0 | 4.75e-01 | 99.0% | 85.7% |
| 4021088 | 302.1.1.0 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain | 0.58 | 47.0 | 4.23e-01 | 89.1% | 84.6% |
| 3236051 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 51.0 | 4.54e-01 | 100.0% | 88.7% |
| 3908315 | 898.1.1.1 ↗ | a+b two layers › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 › Ribosomal_L1 | 0.58 | 50.0 | 4.66e-01 | 98.0% | 92.3% |
| 3694694 | 868.1.1.5 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med18 | 0.57 | 44.0 | 3.37e-01 | 82.2% | 63.2% |
| 3483062 | 221.1.1.116 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_6 | 0.57 | 44.0 | 4.24e-01 | 85.1% | 78.3% |
| 3593924 | 302.1.1.0 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain | 0.57 | 45.0 | 4.28e-01 | 86.1% | 81.7% |
| 3938893 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.56 | 49.0 | 4.03e-01 | 96.0% | 74.1% |
| 4542786 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.54 | 47.0 | 3.83e-01 | 100.0% | 73.3% |
| 1913 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.54 | 48.0 | 4.49e-01 | 96.0% | 100.0% |
| 3411558 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.54 | 42.0 | 3.87e-01 | 86.1% | 73.6% |
| 5061804 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 46.0 | 4.49e-01 | 100.0% | 85.5% |
| 5067153 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 49.0 | 4.53e-01 | 100.0% | 89.9% |
| 3399553 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.54 | 44.0 | 4.34e-01 | 100.0% | 84.8% |
| 3473385 | 859.1.1.3 ↗ | a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › ATG101 | 0.54 | 44.0 | 3.57e-01 | 92.1% | 74.5% |
| 3171619 | 11.1.1.643 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig-like_POM152 | 0.54 | 37.0 | 3.89e-01 | 89.1% | 81.1% |
| 3894112 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.54 | 43.0 | 3.77e-01 | 89.1% | 77.5% |
| 3395915 | 302.1.1.3 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › PF29551 | 0.53 | 44.0 | 3.70e-01 | 92.1% | 81.7% |
| 3497119 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.52 | 40.0 | 3.07e-01 | 82.2% | 63.8% |
| 3611281 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.52 | 35.0 | 2.96e-01 | 92.1% | 39.4% |
| 3475789 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.52 | 44.0 | 4.27e-01 | 96.0% | 84.3% |