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SR-VP_4-6_scaffold_141_476970_prodigal-single.1__X__X__00338
Bact-VirSR-VP_4-6_scaffold_141_476970_prodigal-single.1__X__X__00338
Identity
- Kingdom:
- phage
Quality
83.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-60
Domain cluster:
representative
CATH (62)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8gk4C02 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.70 | 49.0 | 4.17e-01 | 73.7% | 52.1% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.70 | 55.0 | 5.29e-01 | 98.2% | 75.8% |
| 2ipiA02 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.67 | 56.0 | 3.74e-01 | 98.2% | 40.7% |
| 2qlcA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.67 | 57.0 | 4.47e-01 | 100.0% | 44.4% |
| 4h4nA00 | 2.60.40.3750 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.67 | 52.0 | 5.15e-01 | 100.0% | 80.6% |
| 2r6fA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.67 | 51.0 | 4.85e-01 | 98.2% | 69.4% |
| 3rj2X00 | 2.60.120.1150 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 57.0 | 4.39e-01 | 100.0% | 55.6% |
| 1a7gE00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.66 | 58.0 | 5.16e-01 | 100.0% | 100.0% |
| 1zq7A01 | 3.30.700.20 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Hypothetical protein ph0010; domain 1 | 0.65 | 54.0 | 4.23e-01 | 94.7% | 51.2% |
| 1dikA01 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.65 | 54.0 | 4.09e-01 | 100.0% | 51.0% |
| 2a74A02 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.65 | 54.0 | 4.53e-01 | 98.2% | 53.5% |
| 5jtwA02 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.63 | 52.0 | 4.34e-01 | 98.2% | 52.0% |
| 5hnoA00 | 2.70.50.60 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › abc- transporter (atp binding component) like domain | 0.63 | 55.0 | 4.01e-01 | 100.0% | 37.2% |
| 1jx4A04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.63 | 54.0 | 4.57e-01 | 98.2% | 65.3% |
| 2wb7A02 | 2.60.40.2050 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 53.0 | 3.90e-01 | 98.2% | 34.8% |
| 3bgaA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 56.0 | 4.46e-01 | 100.0% | 57.7% |
| 2r5oA01 | 2.70.50.60 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › abc- transporter (atp binding component) like domain | 0.62 | 54.0 | 4.02e-01 | 100.0% | 47.0% |
| 3nqhA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.62 | 52.0 | 4.07e-01 | 100.0% | 56.6% |
| 3payC01 | 2.60.40.2100 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 49.0 | 3.61e-01 | 100.0% | 30.5% |
| 2wq4A01 | 2.60.120.760 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 55.0 | 4.20e-01 | 100.0% | 47.3% |
| 4u7cB04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.62 | 51.0 | 4.28e-01 | 100.0% | 58.7% |
| 1aolA00 | 3.90.310.10 | Alpha Beta › Alpha-Beta Complex › Viral Glycoprotein Gp70 › ENV polyprotein, receptor-binding domain | 0.61 | 52.0 | 3.54e-01 | 100.0% | 97.8% |
| 2df7A02 | 2.60.120.660 | Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus | 0.61 | 52.0 | 4.02e-01 | 100.0% | 43.6% |
| 8dkuA02 | 2.70.50.60 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › abc- transporter (atp binding component) like domain | 0.61 | 53.0 | 3.98e-01 | 100.0% | 40.8% |
| 1yd0A00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.61 | 51.0 | 4.47e-01 | 96.5% | 64.0% |
| 1u8sA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.61 | 50.0 | 4.49e-01 | 98.2% | 94.2% |
| 5u3fB01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.60 | 42.0 | 3.29e-01 | 77.2% | 84.3% |
| 6fwvA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 43.0 | 3.79e-01 | 98.2% | 50.0% |
| 4q7aC02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 48.0 | 4.03e-01 | 94.7% | 98.1% |
| 2ia1A01 | 3.30.500.20 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › BH3703-like domains | 0.60 | 42.0 | 3.38e-01 | 73.7% | 85.7% |
| 6e20A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 50.0 | 3.88e-01 | 96.5% | 75.8% |
| 3r4rA01 | 2.60.40.2580 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 51.0 | 3.86e-01 | 100.0% | 43.6% |
| 2q7nA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 51.0 | 4.13e-01 | 98.2% | 90.9% |
| 5hccB02 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.59 | 50.0 | 4.33e-01 | 100.0% | 63.2% |
| 3irzA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 45.0 | 3.84e-01 | 100.0% | 49.5% |
| 3hqiA01 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.59 | 49.0 | 3.87e-01 | 100.0% | 95.6% |
| 2hw4A01 | 3.50.20.20 | Alpha Beta › 3-Layer(bba) Sandwich › Pyruvoyl-Dependent Histidine Decarboxylase; Chain B › Janus/Ocnus | 0.59 | 48.0 | 3.99e-01 | 96.5% | 85.5% |
| 2j3wC00 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.59 | 45.0 | 3.47e-01 | 84.2% | 42.2% |
| 4g5aA00 | 2.60.40.3080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 50.0 | 4.25e-01 | 100.0% | 78.8% |
| 3c12A02 | 2.60.40.4070 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 49.0 | 4.41e-01 | 100.0% | 69.0% |
| 4clcA00 | 3.30.450.150 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Haem-degrading domain | 0.59 | 41.0 | 3.06e-01 | 77.2% | 26.6% |
| 3hvnA01 | 3.90.840.10 | Alpha Beta › Alpha-Beta Complex › HIV-1 Reverse Transcriptase; Chain A, domain 3 › Thiol-activated cytolysin superfamily/Thiol-activated cytolysin, alpha-beta domain | 0.59 | 47.0 | 3.53e-01 | 98.2% | 48.3% |
| 3egrA00 | 3.10.20.520 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phenylacetic acid degradation B | 0.59 | 49.0 | 4.81e-01 | 96.5% | 87.3% |
| 2z5bA00 | 3.30.230.100 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.58 | 42.0 | 3.36e-01 | 80.7% | 43.3% |
| 1d2oA02 | 2.60.40.1140 | Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain | 0.57 | 40.0 | 3.68e-01 | 100.0% | 53.8% |
| 2j58A03 | 3.30.1950.10 | Alpha Beta › 2-Layer Sandwich › wza like fold › wza like domain | 0.57 | 47.0 | 4.29e-01 | 98.2% | 97.5% |
| 4jrfA01 | 2.60.40.2580 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 48.0 | 3.50e-01 | 100.0% | 53.7% |
| 4p6zM01 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.57 | 45.0 | 3.55e-01 | 87.7% | 43.0% |
| 1pfoA01 | 3.90.840.10 | Alpha Beta › Alpha-Beta Complex › HIV-1 Reverse Transcriptase; Chain A, domain 3 › Thiol-activated cytolysin superfamily/Thiol-activated cytolysin, alpha-beta domain | 0.56 | 45.0 | 3.33e-01 | 98.2% | 45.9% |
| 5kfzA04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.55 | 44.0 | 3.66e-01 | 100.0% | 56.9% |
| 4oq8A00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.55 | 45.0 | 3.51e-01 | 100.0% | 43.1% |
| 7l9pK01 | 3.30.900.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain | 0.54 | 45.0 | 3.63e-01 | 96.5% | 50.4% |
| 3rgzA02 | 3.30.1490.310 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.54 | 46.0 | 4.55e-01 | 100.0% | 96.7% |
| 2mf9A00 | 3.10.50.40 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.54 | 43.0 | 3.24e-01 | 93.0% | 51.0% |
| 3m70A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 46.0 | 3.80e-01 | 98.2% | 64.2% |
| 1x5lA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 40.0 | 3.67e-01 | 100.0% | 58.0% |
| 2ipiA01 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.53 | 43.0 | 2.90e-01 | 91.2% | 41.6% |
| 1ut9A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 44.0 | 3.84e-01 | 100.0% | 60.2% |
| 3oqgA00 | 3.40.1440.50 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › | 0.53 | 44.0 | 3.24e-01 | 100.0% | 55.1% |
| 2pjyC00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.51 | 40.0 | 3.79e-01 | 98.2% | 91.1% |
| 2m2kA00 | 3.30.1150.10 | Alpha Beta › 2-Layer Sandwich › Fusion Protein Consisting Of Minor Coat Protein, Glycine Rich Linker, Tola, And A His Tag; Chain: A; Domain 2 › | 0.50 | 45.0 | 3.42e-01 | 100.0% | 49.6% |
| 4aw7A01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.50 | 43.0 | 3.44e-01 | 98.2% | 61.0% |
ECOD (72)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3691174 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.72 | 62.0 | 4.90e-01 | 100.0% | 46.7% |
| 4380266 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.71 | 54.0 | 3.58e-01 | 82.5% | 57.4% |
| 4175430 | 1119.1.1.1 ↗ | a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW | 0.70 | 59.0 | 3.94e-01 | 100.0% | 23.9% |
| 5080880 | 11.1.1.608 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Por_Secre_tail | 0.70 | 58.0 | 4.94e-01 | 100.0% | 57.8% |
| 3216927 | 11.1.1.905 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_ILCR1 | 0.69 | 56.0 | 4.54e-01 | 100.0% | 46.1% |
| 4033537 | 1119.1.1.1 ↗ | a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW | 0.69 | 57.0 | 3.89e-01 | 98.2% | 24.3% |
| 4999156 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.68 | 56.0 | 4.61e-01 | 96.5% | 99.1% |
| 4535557 | 220.1.1.192 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_S11IP_C | 0.68 | 46.0 | 3.26e-01 | 71.9% | 35.3% |
| 5053336 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.67 | 55.0 | 4.73e-01 | 98.2% | 91.0% |
| 3064137 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.67 | 54.0 | 3.70e-01 | 94.7% | 88.8% |
| 3593981 | 302.1.1.0 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain | 0.66 | 55.0 | 4.67e-01 | 100.0% | 58.1% |
| 4946583 | 302.1.1.0 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain | 0.66 | 56.0 | 4.55e-01 | 100.0% | 54.8% |
| 3884093 | 10.41.1.0 ↗ | beta sandwiches › jelly-roll › Protein Hikeshi jelly-roll domain › Protein Hikeshi jelly-roll domain | 0.65 | 53.0 | 4.45e-01 | 100.0% | 52.0% |
| 4964887 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.65 | 55.0 | 4.47e-01 | 100.0% | 50.0% |
| 5048630 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.65 | 54.0 | 4.21e-01 | 98.2% | 99.3% |
| 4136835 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 47.0 | 4.45e-01 | 100.0% | 63.0% |
| 3656214 | 223.2.1.9 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Sedlin_N | 0.65 | 50.0 | 3.67e-01 | 84.2% | 49.7% |
| 3743280 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.64 | 54.0 | 4.43e-01 | 100.0% | 51.3% |
| 3756132 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.63 | 50.0 | 4.31e-01 | 100.0% | 53.7% |
| 5049412 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.63 | 52.0 | 4.21e-01 | 100.0% | 48.0% |
| 3299192 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.63 | 53.0 | 4.43e-01 | 100.0% | 53.6% |
| 3665041 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.63 | 54.0 | 4.27e-01 | 100.0% | 47.2% |
| 3573883 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.63 | 52.0 | 4.21e-01 | 100.0% | 51.2% |
| 5059872 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.63 | 56.0 | 3.38e-01 | 100.0% | 15.8% |
| 3540023 | 382.1.1.1 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 | 0.62 | 53.0 | 4.67e-01 | 100.0% | 95.6% |
| 4926832 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.62 | 53.0 | 4.23e-01 | 100.0% | 48.8% |
| 3848604 | 11.1.1.1057 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M, MG2, A2M_BRD, MG4, MG1 | 0.62 | 54.0 | 3.12e-01 | 100.0% | 20.5% |
| 5027839 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 51.0 | 4.40e-01 | 96.5% | 57.8% |
| 5052980 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 54.0 | 4.32e-01 | 98.2% | 53.5% |
| 4977520 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.61 | 51.0 | 4.26e-01 | 100.0% | 55.5% |
| 5045852 | 302.4.1.1 ↗ | a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.61 | 46.0 | 3.76e-01 | 82.5% | 50.9% |
| 3483062 | 221.1.1.116 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_6 | 0.61 | 51.0 | 4.17e-01 | 100.0% | 90.0% |
| 5041452 | 303.1.1.1 ↗ | a+b four layers › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases › PvlArgDC | 0.61 | 49.0 | 3.77e-01 | 96.5% | 90.2% |
| 4031279 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.61 | 50.0 | 3.93e-01 | 100.0% | 43.6% |
| 4418109 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.61 | 50.0 | 3.91e-01 | 100.0% | 42.7% |
| 3804197 | 207.1.1.238 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3, LRR_13 | 0.61 | 53.0 | 3.08e-01 | 98.2% | 13.1% |
| 4975837 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 48.0 | 4.23e-01 | 100.0% | 58.9% |
| 1382318 | 11.1.1.31 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG2 | 0.60 | 51.0 | 4.29e-01 | 100.0% | 83.5% |
| 4940717 | 11.1.1.31 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG2 | 0.60 | 51.0 | 4.17e-01 | 100.0% | 82.6% |
| 4947741 | 821.1.1.17 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › PF27096 | 0.59 | 49.0 | 4.36e-01 | 94.7% | 67.1% |
| 4029586 | 10.32.1.203 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin | 0.59 | 50.0 | 3.79e-01 | 100.0% | 52.7% |
| 3596679 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.59 | 50.0 | 3.76e-01 | 100.0% | 45.2% |
| 199962 | 3115.5.1.1 ↗ | a+b two layers › GP2-like › phenylacetate-CoA oxygenase subunit PaaB › phenylacetate-CoA oxygenase subunit PaaB › PaaB | 0.59 | 49.0 | 4.81e-01 | 96.5% | 87.3% |
| 4962193 | 302.4.1.1 ↗ | a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.59 | 43.0 | 3.63e-01 | 82.5% | 51.4% |
| 3794250 | 11.1.1.31 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG2 | 0.58 | 49.0 | 3.75e-01 | 98.2% | 57.9% |
| 4236834 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.58 | 46.0 | 4.16e-01 | 98.2% | 62.4% |
| 4030677 | 1116.1.1.0 ↗ | a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain | 0.58 | 49.0 | 3.69e-01 | 100.0% | 40.7% |
| 3257134 | 304.121.1.1 ↗ | a+b two layers › Alpha-beta plaits › SP0830-like › SP0830-like › DUF1697 | 0.57 | 46.0 | 4.13e-01 | 96.5% | 90.0% |
| 4942526 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 50.0 | 4.16e-01 | 100.0% | 83.8% |
| 3390315 | 304.8.1.54 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_13 | 0.57 | 46.0 | 4.32e-01 | 96.5% | 100.0% |
| 3621110 | 11.1.1.31 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG2 | 0.57 | 48.0 | 4.08e-01 | 98.2% | 85.0% |
| 3274214 | 859.1.1.1 ↗ | a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › HORMA | 0.57 | 50.0 | 3.50e-01 | 100.0% | 33.2% |
| 3994341 | 6165.1.1.1 ↗ | beta sandwiches › Piezo CTL2 domain › Piezo CTL2 domain › Piezo CTL2 domain › Piezo_RRas_bdg | 0.57 | 50.0 | 3.32e-01 | 100.0% | 45.2% |
| 3210904 | 12.6.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related | 0.57 | 47.0 | 3.66e-01 | 96.5% | 49.6% |
| 4944411 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 41.0 | 3.24e-01 | 82.5% | 34.1% |
| 3710575 | 75.1.1.1 ↗ | beta barrels › Cyclophilin-like › Cyclophilin-like › Cyclophilin-like › Pro_isomerase | 0.56 | 47.0 | 3.43e-01 | 98.2% | 97.8% |
| 3508990 | 3115.3.1.2 ↗ | a+b two layers › GP2-like › P56 › P56 › DUF2922 | 0.56 | 44.0 | 4.35e-01 | 96.5% | 96.9% |
| 3919365 | 6165.1.1.1 ↗ | beta sandwiches › Piezo CTL2 domain › Piezo CTL2 domain › Piezo CTL2 domain › Piezo_RRas_bdg | 0.56 | 49.0 | 3.31e-01 | 100.0% | 47.7% |
| 4289847 | 272.1.1.1 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TonB_C | 0.56 | 51.0 | 4.23e-01 | 100.0% | 68.4% |
| 3548875 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 45.0 | 2.60e-01 | 96.5% | 77.0% |
| 3493644 | 10.32.1.203 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin | 0.55 | 47.0 | 3.48e-01 | 100.0% | 70.3% |
| 3218185 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.54 | 42.0 | 2.86e-01 | 86.0% | 47.9% |
| 3167876 | 223.2.1.9 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Sedlin_N | 0.54 | 46.0 | 3.24e-01 | 94.7% | 66.9% |
| 3501768 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.53 | 43.0 | 4.09e-01 | 96.5% | 81.4% |
| 3972969 | 272.1.1.0 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain | 0.53 | 48.0 | 4.01e-01 | 100.0% | 68.4% |
| 3964903 | 272.1.1.1 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TonB_C | 0.53 | 48.0 | 4.37e-01 | 100.0% | 76.0% |
| 3839673 | 272.1.1.1 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TonB_C | 0.52 | 47.0 | 3.76e-01 | 100.0% | 54.5% |
| 3726900 | 11.1.1.642 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig-like_Pom152_1 | 0.52 | 44.0 | 3.64e-01 | 100.0% | 62.7% |
| 4945976 | 302.4.1.1 ↗ | a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.52 | 45.0 | 3.60e-01 | 100.0% | 71.7% |
| 3722232 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 41.0 | 3.35e-01 | 91.2% | 67.8% |
| 4465843 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.51 | 42.0 | 3.74e-01 | 96.5% | 94.4% |
| 3600531 | 4012.3.1.0 ↗ | a+b two layers › SSHS domain › SSHS domain in CRISPR-associated endonuclease Cas9 › SSHS domain in CRISPR-associated endonuclease Cas9 | 0.51 | 39.0 | 3.99e-01 | 94.7% | 100.0% |