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SR-VP_4-6_scaffold_141_476970_prodigal-single.1__X__X__00448
Bact-VirSR-VP_4-6_scaffold_141_476970_prodigal-single.1__X__X__00448
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-104
Domain cluster:
rep: SRR1747059_scaffold_22_prodigal-single.1__X__X__00132__D10-99
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ej9A02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.83 | 44.0 | 5.86e-01 | 88.9% | 95.9% |
| 4f7uG00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.82 | 55.0 | 6.32e-01 | 92.2% | 91.2% |
| 4m7dA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.82 | 53.0 | 6.14e-01 | 91.1% | 90.8% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 46.0 | 5.30e-01 | 92.2% | 77.3% |
| 1m5q101 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 52.0 | 5.96e-01 | 93.3% | 88.2% |
| 4c92A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 60.0 | 5.23e-01 | 97.8% | 54.6% |
| 6asoH00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 47.0 | 4.94e-01 | 87.8% | 65.1% |
| 4f7uF00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 53.0 | 5.81e-01 | 92.2% | 84.9% |
| 1kq1H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 44.0 | 5.12e-01 | 91.1% | 77.3% |
| 4m78N00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 50.0 | 5.54e-01 | 93.3% | 83.1% |
| 3by7E00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 62.0 | 6.76e-01 | 98.9% | 100.0% |
| 5mkiH00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 49.0 | 5.46e-01 | 90.0% | 81.7% |
| 4emhA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 50.0 | 6.00e-01 | 90.0% | 100.0% |
| 4c92G00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 53.0 | 5.72e-01 | 93.3% | 86.7% |
| 1d3bC00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 50.0 | 5.62e-01 | 92.2% | 87.3% |
| 1b34B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 50.0 | 5.49e-01 | 95.6% | 83.8% |
| 4a53A01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 44.0 | 5.16e-01 | 91.1% | 85.5% |
| 4c92F00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 53.0 | 5.72e-01 | 95.6% | 87.0% |
| 3pggA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 52.0 | 5.53e-01 | 92.2% | 84.6% |
| 3jb9F00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 49.0 | 5.19e-01 | 93.3% | 76.8% |
| 6v4xC01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 49.0 | 4.79e-01 | 93.3% | 63.0% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 45.0 | 4.67e-01 | 92.2% | 69.9% |
| 4c92B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 49.0 | 4.64e-01 | 93.3% | 62.9% |
| 1y96A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 47.0 | 4.81e-01 | 97.8% | 73.3% |
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.68 | 36.0 | 4.65e-01 | 90.0% | 95.8% |
| 4c92C00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 49.0 | 5.22e-01 | 91.1% | 86.1% |
| 1d3bB00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 51.0 | 5.42e-01 | 97.8% | 92.6% |
| 2fb7A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 46.0 | 4.85e-01 | 93.3% | 90.0% |
| 5hk0B00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 53.0 | 5.04e-01 | 100.0% | 87.9% |
| 3jscA00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 50.0 | 4.96e-01 | 100.0% | 91.7% |
| 2qf4A02 | 2.40.10.350 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 2 | 0.51 | 34.0 | 3.46e-01 | 96.7% | 67.0% |
| 6epkA02 | 3.30.67.10 | Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 | 0.51 | 32.0 | 3.48e-01 | 92.2% | 78.9% |
| 2ikkA00 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.51 | 35.0 | 3.09e-01 | 73.3% | 88.4% |
ECOD (88)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4983255 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.85 | 56.0 | 6.12e-01 | 92.2% | 81.3% |
| 2632533 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.83 | 58.0 | 6.55e-01 | 91.1% | 92.8% |
| 5075579 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 57.0 | 6.10e-01 | 95.6% | 80.0% |
| 4575051 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.82 | 55.0 | 5.85e-01 | 93.3% | 77.5% |
| 4987003 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.82 | 52.0 | 6.06e-01 | 91.1% | 89.2% |
| 4990775 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.82 | 51.0 | 5.57e-01 | 91.1% | 76.0% |
| 4948178 | 4.1.1.484 ↗ | beta barrels › SH3 › SH3 › SH3 › Lsm_C | 0.81 | 51.0 | 5.80e-01 | 91.1% | 82.9% |
| 4990442 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.81 | 56.0 | 5.95e-01 | 93.3% | 80.0% |
| 4974641 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.81 | 56.0 | 6.27e-01 | 95.6% | 91.4% |
| 4015537 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 55.0 | 5.89e-01 | 93.3% | 80.8% |
| 4934755 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 53.0 | 5.92e-01 | 93.3% | 85.7% |
| 3626400 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.80 | 59.0 | 5.16e-01 | 96.7% | 53.1% |
| 5002088 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 55.0 | 5.89e-01 | 96.7% | 80.0% |
| 5037228 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.80 | 50.0 | 5.83e-01 | 90.0% | 87.7% |
| 3214326 | 4.1.1.81 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM14 | 0.80 | 53.0 | 5.97e-01 | 93.3% | 87.1% |
| 3812580 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.80 | 59.0 | 5.23e-01 | 96.7% | 56.1% |
| 5042049 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 52.0 | 5.35e-01 | 93.3% | 70.6% |
| 3483309 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 58.0 | 5.17e-01 | 96.7% | 55.2% |
| 4996021 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 52.0 | 5.55e-01 | 95.6% | 76.2% |
| 5011460 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 52.0 | 5.89e-01 | 93.3% | 87.1% |
| 3502962 | 4.1.1.89 ↗ | beta barrels › SH3 › SH3 › SH3 › SM-ATX | 0.79 | 57.0 | 6.10e-01 | 91.1% | 85.0% |
| 4971102 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.79 | 50.0 | 5.62e-01 | 91.1% | 82.9% |
| 5077846 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.79 | 51.0 | 5.59e-01 | 91.1% | 80.0% |
| 3936053 | 4.1.1.71 ↗ | beta barrels › SH3 › SH3 › SH3 › Gemin7 | 0.79 | 49.0 | 5.52e-01 | 91.1% | 81.4% |
| 3586008 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 53.0 | 6.02e-01 | 94.4% | 90.0% |
| 3616088 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 54.0 | 6.09e-01 | 95.6% | 91.4% |
| 3619686 | 4.1.1.71 ↗ | beta barrels › SH3 › SH3 › SH3 › Gemin7 | 0.77 | 46.0 | 5.77e-01 | 88.9% | 98.2% |
| 5026766 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.77 | 48.0 | 5.63e-01 | 91.1% | 87.7% |
| 3167351 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.77 | 53.0 | 5.42e-01 | 93.3% | 72.7% |
| 3793196 | 4.1.1.71 ↗ | beta barrels › SH3 › SH3 › SH3 › Gemin7 | 0.77 | 49.0 | 4.97e-01 | 92.2% | 65.6% |
| 1175040 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.76 | 50.0 | 6.00e-01 | 90.0% | 100.0% |
| 3928928 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 55.0 | 6.00e-01 | 97.8% | 89.3% |
| 4532859 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 50.0 | 5.98e-01 | 90.0% | 100.0% |
| 4013632 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 51.0 | 5.44e-01 | 91.1% | 79.5% |
| 4010995 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 58.0 | 6.36e-01 | 95.6% | 96.0% |
| 4813032 | 4.1.1.328 ↗ | beta barrels › SH3 › SH3 › SH3 › Sm_like | 0.75 | 60.0 | 6.39e-01 | 100.0% | 96.2% |
| 4485354 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.75 | 51.0 | 5.04e-01 | 92.2% | 67.0% |
| 5044296 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 55.0 | 5.96e-01 | 93.3% | 89.7% |
| 3710540 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.74 | 53.0 | 5.76e-01 | 91.1% | 89.3% |
| 4961804 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 56.0 | 6.16e-01 | 94.4% | 96.0% |
| 3506156 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.73 | 50.0 | 5.46e-01 | 93.3% | 84.0% |
| 4030048 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.73 | 60.0 | 5.70e-01 | 100.0% | 74.3% |
| 3915752 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.73 | 55.0 | 5.51e-01 | 93.3% | 77.8% |
| 3598832 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 49.0 | 5.71e-01 | 92.2% | 95.4% |
| 3598657 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 50.0 | 4.87e-01 | 93.3% | 64.0% |
| 3701868 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.73 | 54.0 | 5.46e-01 | 95.6% | 77.8% |
| 2701178 | 4.1.1.71 ↗ | beta barrels › SH3 › SH3 › SH3 › Gemin7 | 0.72 | 46.0 | 4.76e-01 | 92.2% | 67.8% |
| 3772638 | 4.1.1.71 ↗ | beta barrels › SH3 › SH3 › SH3 › Gemin7 | 0.72 | 46.0 | 4.89e-01 | 92.2% | 72.8% |
| 3999729 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.72 | 51.0 | 5.18e-01 | 93.3% | 74.2% |
| 3271407 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 52.0 | 5.36e-01 | 95.6% | 80.0% |
| 3703320 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.71 | 53.0 | 5.69e-01 | 92.2% | 88.6% |
| 4976962 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 64.0 | 6.13e-01 | 100.0% | 86.0% |
| 3740204 | 4.1.1.71 ↗ | beta barrels › SH3 › SH3 › SH3 › Gemin7 | 0.71 | 47.0 | 4.90e-01 | 93.3% | 72.9% |
| 4014972 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 58.0 | 5.89e-01 | 100.0% | 87.8% |
| 3189264 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.71 | 58.0 | 5.64e-01 | 100.0% | 79.0% |
| 3482844 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 56.0 | 5.78e-01 | 97.8% | 89.4% |
| 4380345 | 4.1.1.257 ↗ | beta barrels › SH3 › SH3 › SH3 › Flag1_repress | 0.70 | 48.0 | 5.00e-01 | 100.0% | 75.3% |
| 3832288 | 4.1.1.81 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM14 | 0.70 | 57.0 | 5.71e-01 | 93.3% | 85.6% |
| 5081091 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 61.0 | 6.04e-01 | 95.6% | 89.5% |
| 5032402 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 54.0 | 5.54e-01 | 92.2% | 87.1% |
| 3706504 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.69 | 55.0 | 5.70e-01 | 98.9% | 89.4% |
| 3626383 | 4.1.1.81 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM14 | 0.69 | 54.0 | 5.37e-01 | 94.4% | 78.9% |
| 3167103 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.68 | 54.0 | 5.21e-01 | 93.3% | 75.0% |
| 3176686 | 4.1.1.81 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM14 | 0.67 | 56.0 | 5.82e-01 | 100.0% | 95.3% |
| 3699736 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 53.0 | 5.26e-01 | 91.1% | 80.9% |
| 3820621 | 4.1.1.81 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM14 | 0.66 | 53.0 | 5.66e-01 | 94.4% | 95.0% |
| 3730294 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.66 | 50.0 | 5.32e-01 | 93.3% | 88.7% |
| 3368568 | 4.1.1.81 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM14 | 0.66 | 55.0 | 5.56e-01 | 97.8% | 87.8% |
| 3593948 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 54.0 | 5.59e-01 | 95.6% | 91.8% |
| 3600405 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 54.0 | 5.44e-01 | 98.9% | 86.7% |
| 3455165 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.66 | 52.0 | 5.17e-01 | 93.3% | 80.0% |
| 3484138 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 58.0 | 5.61e-01 | 94.4% | 86.7% |
| 3788565 | 4.1.1.89 ↗ | beta barrels › SH3 › SH3 › SH3 › SM-ATX | 0.66 | 48.0 | 4.89e-01 | 92.2% | 76.7% |
| 3786412 | 4.1.1.344 ↗ | beta barrels › SH3 › SH3 › SH3 › PF31193 | 0.66 | 48.0 | 5.10e-01 | 94.4% | 85.0% |
| 3610074 | 4.1.1.81 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM14 | 0.66 | 55.0 | 5.11e-01 | 96.7% | 72.7% |
| 3596655 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 58.0 | 4.76e-01 | 96.7% | 66.9% |
| 3703836 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.64 | 60.0 | 5.50e-01 | 100.0% | 86.1% |
| 3389662 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.64 | 45.0 | 4.79e-01 | 94.4% | 82.5% |
| 3788817 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.64 | 50.0 | 5.17e-01 | 91.1% | 87.1% |
| 3722424 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.64 | 56.0 | 5.43e-01 | 94.4% | 87.0% |
| 3187241 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.63 | 55.0 | 5.15e-01 | 94.4% | 80.0% |
| 4015057 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 53.0 | 5.16e-01 | 92.2% | 86.0% |
| 3197566 | 4.1.1.89 ↗ | beta barrels › SH3 › SH3 › SH3 › SM-ATX | 0.62 | 53.0 | 5.17e-01 | 92.2% | 83.0% |
| 3168996 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.62 | 54.0 | 4.81e-01 | 94.4% | 68.8% |
| 4017204 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.60 | 53.0 | 5.15e-01 | 94.4% | 86.0% |
| 3169596 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.60 | 52.0 | 4.63e-01 | 93.3% | 72.8% |
| 3702167 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 53.0 | 4.87e-01 | 97.8% | 75.7% |
| 3684460 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.55 | 49.0 | 4.86e-01 | 97.8% | 93.7% |