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SR-VP_4-6_scaffold_141_559231_prodigal-single.1__X__X__00576
Bact-VirSR-VP_4-6_scaffold_141_559231_prodigal-single.1__X__X__00576
Identity
- Kingdom:
- phage
Quality
84.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-16_215-376
Domain cluster:
rep: S16_GE16_scaffold_10741_prodigal-single.1__X__X__00083__D1-111_115-129
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ia7A00 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.85 | 52.0 | 6.60e-01 | 74.7% | 98.2% |
| 6s5xA01 | 2.60.40.3600 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 28.0 | 3.95e-01 | 70.8% | 100.0% |
| 4jguA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 30.0 | 4.07e-01 | 70.2% | 92.6% |
| 1ue6D00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 22.0 | 2.78e-01 | 80.3% | 55.8% |
| 5odnC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 21.0 | 2.74e-01 | 79.8% | 56.9% |
| 1f0cA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.56 | 23.0 | 2.77e-01 | 86.0% | 52.5% |
| 2c4xA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 30.0 | 3.98e-01 | 76.4% | 97.9% |
| 4gs3A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 20.0 | 2.78e-01 | 87.6% | 63.3% |
| 1ulvA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 27.0 | 3.81e-01 | 70.2% | 100.0% |
| 2nlkA02 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.53 | 33.0 | 2.89e-01 | 87.1% | 41.5% |
| 2xklA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 27.0 | 2.93e-01 | 78.7% | 55.7% |
| 5icuA00 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 30.0 | 3.96e-01 | 75.3% | 100.0% |
| 5iroD00 | 2.60.40.3530 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 30.0 | 3.88e-01 | 92.7% | 100.0% |
| 3nppA00 | 2.40.50.480 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Protein of unknown function DUF1093 | 0.52 | 19.0 | 2.59e-01 | 84.3% | 59.8% |
| 3k7cA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 26.0 | 3.30e-01 | 86.5% | 78.7% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3981113 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.89 | 54.0 | 6.97e-01 | 85.4% | 100.0% |
| 5004672 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.88 | 59.0 | 7.20e-01 | 85.4% | 100.0% |
| 3941521 | 283.2.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like | 0.84 | 53.0 | 6.65e-01 | 82.0% | 100.0% |
| 3966072 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.83 | 51.0 | 6.47e-01 | 84.8% | 100.0% |
| 3355345 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 22.0 | 3.62e-01 | 86.0% | 77.1% |
| 1824160 | 395.1.1.2 ↗ | few secondary structure elements › Midkine-related › Midkine-related › Midkine-related › PTN_MK_N | 0.65 | 24.0 | 3.86e-01 | 75.8% | 90.6% |
| 4879890 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 20.0 | 3.06e-01 | 82.6% | 64.5% |
| 3337303 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 24.0 | 3.72e-01 | 86.5% | 84.0% |
| 3593551 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.60 | 31.0 | 4.11e-01 | 70.2% | 90.0% |
| 5007161 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 33.0 | 4.26e-01 | 86.5% | 98.0% |
| 3197575 | 2.1.1.1 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 | 0.57 | 19.0 | 2.68e-01 | 81.5% | 56.7% |
| 4679671 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.56 | 33.0 | 4.02e-01 | 83.1% | 87.3% |
| 137754 | 3414.1.1.3 ↗ | beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › Bact_surface_Ig-like | 0.56 | 30.0 | 3.84e-01 | 79.2% | 91.8% |
| 5082113 | 11.1.1.284 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 | 0.53 | 31.0 | 3.91e-01 | 80.3% | 100.0% |
| 4954298 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.52 | 22.0 | 2.93e-01 | 81.5% | 69.5% |
| 4106038 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.52 | 37.0 | 3.69e-01 | 73.6% | 83.0% |
| 136977 | 243.1.1.20 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4878 | 0.52 | 26.0 | 3.30e-01 | 86.5% | 78.7% |
| 3239313 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.51 | 37.0 | 3.01e-01 | 87.6% | 40.3% |
| 3214545 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.51 | 36.0 | 2.98e-01 | 88.2% | 41.0% |
| 4027577 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 28.0 | 3.34e-01 | 88.2% | 76.8% |
| 3934766 | 11.1.1.835 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_Irg-7 | 0.51 | 33.0 | 3.77e-01 | 86.0% | 86.7% |
| 3214875 | 11.1.1.835 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_Irg-7 | 0.51 | 34.0 | 3.97e-01 | 86.5% | 96.0% |
D2
medium
residues 17-54_165-214
Domain cluster:
rep: IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015591__D14-94
CATH (48)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1o7dC02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.62 | 47.0 | 4.74e-01 | 87.5% | 80.9% |
| 4b96A00 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.62 | 52.0 | 4.39e-01 | 94.3% | 67.5% |
| 3vmnA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.62 | 48.0 | 4.15e-01 | 85.2% | 71.8% |
| 4nzdB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 48.0 | 4.69e-01 | 86.4% | 80.8% |
| 7nitA06 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.61 | 51.0 | 4.18e-01 | 94.3% | 57.0% |
| 1oh4A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.61 | 49.0 | 3.96e-01 | 88.6% | 70.7% |
| 3fcsA03 | 2.60.40.1510 | Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 | 0.60 | 53.0 | 4.60e-01 | 100.0% | 78.4% |
| 3zn6A02 | 2.60.40.3410 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 48.0 | 4.87e-01 | 87.5% | 97.7% |
| 1je6A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 49.0 | 4.91e-01 | 90.9% | 92.1% |
| 4gaaA01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.59 | 51.0 | 4.02e-01 | 97.7% | 86.5% |
| 1ep3B01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.59 | 46.0 | 4.50e-01 | 86.4% | 93.9% |
| 6x4tA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 48.0 | 4.91e-01 | 90.9% | 94.1% |
| 3op1A02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.59 | 46.0 | 4.34e-01 | 86.4% | 72.1% |
| 4v15A01 | 2.40.37.20 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › D-serine dehydratase-like domain | 0.59 | 51.0 | 4.43e-01 | 100.0% | 70.8% |
| 3ciaA01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.58 | 51.0 | 4.07e-01 | 100.0% | 85.9% |
| 2x12A01 | 2.60.40.2010 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 50.0 | 3.96e-01 | 97.7% | 75.3% |
| 2e8yA01 | 2.60.40.2320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 45.0 | 4.33e-01 | 87.5% | 73.3% |
| 1n08A00 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.58 | 45.0 | 3.82e-01 | 86.4% | 61.0% |
| 5h4cB00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 47.0 | 4.08e-01 | 89.8% | 91.9% |
| 4b60A01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 49.0 | 4.30e-01 | 100.0% | 74.8% |
| 4psrA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.57 | 47.0 | 4.25e-01 | 93.2% | 66.4% |
| 3h7lA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 44.0 | 4.37e-01 | 86.4% | 87.1% |
| 1n67A01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 49.0 | 4.28e-01 | 100.0% | 75.2% |
| 5oj2A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 46.0 | 4.47e-01 | 92.0% | 93.0% |
| 3ks7A02 | 2.60.120.230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 45.0 | 3.63e-01 | 89.8% | 95.0% |
| 4zrxA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 44.0 | 4.21e-01 | 87.5% | 96.2% |
| 2xbtA00 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.55 | 46.0 | 3.91e-01 | 96.6% | 69.6% |
| 1cwpA00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.55 | 47.0 | 4.05e-01 | 100.0% | 85.9% |
| 3swoA02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.54 | 38.0 | 3.65e-01 | 72.7% | 87.5% |
| 1ji6A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 43.0 | 3.58e-01 | 87.5% | 84.0% |
| 3oq3B03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 45.0 | 4.30e-01 | 94.3% | 86.4% |
| 1s14B00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.54 | 40.0 | 3.25e-01 | 79.5% | 69.7% |
| 4p72A03 | 3.50.40.10 | Alpha Beta › 3-Layer(bba) Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 3 › Phenylalanyl-trna Synthetase, Chain B, domain 3 | 0.53 | 40.0 | 3.09e-01 | 79.5% | 76.9% |
| 2e9wB05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 43.0 | 4.33e-01 | 93.2% | 90.1% |
| 5b08A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 41.0 | 3.97e-01 | 84.1% | 90.0% |
| 2e4mC00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.53 | 36.0 | 3.14e-01 | 70.5% | 99.3% |
| 5l73A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 43.0 | 3.48e-01 | 89.8% | 87.4% |
| 2vm9A02 | 2.60.40.2080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 43.0 | 4.18e-01 | 89.8% | 91.8% |
| 1tulA00 | 2.70.40.20 | Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Baculovirus telokin-like protein 20 | 0.53 | 41.0 | 4.01e-01 | 87.5% | 83.3% |
| 1t4wA00 | 2.60.40.720 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 44.0 | 3.49e-01 | 97.7% | 71.9% |
| 2vo8A00 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 44.0 | 3.96e-01 | 100.0% | 85.2% |
| 3l81A02 | 2.60.40.1170 | Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B | 0.52 | 41.0 | 3.86e-01 | 93.2% | 70.9% |
| 2ypyA00 | 3.30.70.390 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Epstein Barr virus nuclear antigen-1, DNA-binding domain | 0.52 | 41.0 | 3.64e-01 | 87.5% | 73.1% |
| 1h6eA02 | 2.60.40.1170 | Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B | 0.51 | 39.0 | 3.74e-01 | 90.9% | 70.5% |
| 3bguA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 39.0 | 3.86e-01 | 84.1% | 90.6% |
| 7nadw01 | 3.40.50.12760 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 39.0 | 3.68e-01 | 85.2% | 67.3% |
| 6ovbA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 41.0 | 3.53e-01 | 93.2% | 57.1% |
| 3o4oB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 40.0 | 3.86e-01 | 93.2% | 86.2% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5039651 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 53.0 | 4.75e-01 | 90.9% | 75.8% |
| 4003309 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.63 | 50.0 | 4.96e-01 | 87.5% | 80.0% |
| 4653283 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.63 | 52.0 | 3.98e-01 | 100.0% | 38.6% |
| 5050287 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.62 | 49.0 | 4.92e-01 | 85.2% | 96.7% |
| 4955932 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.62 | 54.0 | 4.23e-01 | 100.0% | 81.5% |
| 4964688 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.62 | 52.0 | 5.02e-01 | 92.0% | 89.9% |
| 3934459 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 50.0 | 4.81e-01 | 89.8% | 85.0% |
| 3332960 | 11.1.1.909 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Gpi16 | 0.61 | 54.0 | 3.87e-01 | 100.0% | 63.0% |
| 4083714 | 11.1.5.89 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF3707 | 0.61 | 53.0 | 4.34e-01 | 97.7% | 69.7% |
| 3602447 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.60 | 54.0 | 4.36e-01 | 100.0% | 88.8% |
| 5036977 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.60 | 53.0 | 4.26e-01 | 100.0% | 85.0% |
| 4970326 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.60 | 48.0 | 4.74e-01 | 87.5% | 86.3% |
| 3187876 | 11.1.5.94 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Gpi16 | 0.60 | 53.0 | 3.85e-01 | 100.0% | 57.8% |
| 5048248 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.60 | 48.0 | 4.88e-01 | 86.4% | 91.8% |
| 3778889 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.60 | 50.0 | 4.33e-01 | 93.2% | 62.1% |
| 3934401 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 49.0 | 4.61e-01 | 92.0% | 78.2% |
| 5053832 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.59 | 51.0 | 4.06e-01 | 100.0% | 85.6% |
| 5055679 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 41.0 | 4.47e-01 | 77.3% | 92.9% |
| 3933376 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 49.0 | 4.59e-01 | 94.3% | 87.3% |
| 3863526 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.58 | 49.0 | 4.54e-01 | 94.3% | 84.3% |
| 3879388 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.58 | 48.0 | 3.87e-01 | 93.2% | 51.1% |
| 3929255 | 1.1.7.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase | 0.58 | 45.0 | 3.91e-01 | 86.4% | 64.8% |
| 3730494 | 11.1.1.962 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7077 | 0.57 | 48.0 | 4.29e-01 | 98.9% | 63.8% |
| 3991280 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.57 | 48.0 | 4.38e-01 | 94.3% | 82.5% |
| 5013199 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 47.0 | 4.47e-01 | 93.2% | 87.6% |
| 3262495 | 11.1.1.802 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 | 0.57 | 40.0 | 4.14e-01 | 86.4% | 78.8% |
| 3592708 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.57 | 44.0 | 3.72e-01 | 86.4% | 70.0% |
| 3394081 | 10.32.1.195 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PAAT-like | 0.57 | 46.0 | 3.93e-01 | 93.2% | 52.3% |
| 3555892 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.57 | 47.0 | 3.85e-01 | 93.2% | 50.6% |
| 4962172 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 48.0 | 3.95e-01 | 97.7% | 72.2% |
| 3394335 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.56 | 46.0 | 3.81e-01 | 94.3% | 51.2% |
| 3481106 | 4178.1.1.0 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain | 0.55 | 43.0 | 3.62e-01 | 87.5% | 58.2% |
| 5056060 | 328.8.1.1 ↗ | a+b two layers › IF3-like › Schlafen 8 › Schlafen 8 › SLFN_AlbA_2 | 0.55 | 41.0 | 3.59e-01 | 79.5% | 74.8% |
| 3969203 | 4182.1.1.0 ↗ | beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like | 0.55 | 45.0 | 4.15e-01 | 90.9% | 70.4% |
| 3275765 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.55 | 43.0 | 4.10e-01 | 94.3% | 70.9% |
| 3258216 | 12.3.1.46 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD | 0.55 | 43.0 | 3.33e-01 | 89.8% | 51.6% |
| 3411291 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.55 | 45.0 | 4.32e-01 | 94.3% | 80.0% |
| 4934606 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.55 | 45.0 | 3.73e-01 | 94.3% | 64.7% |
| 3491700 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 48.0 | 3.98e-01 | 100.0% | 79.4% |
| 4998046 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.54 | 48.0 | 4.20e-01 | 100.0% | 80.7% |
| 3611768 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 46.0 | 4.20e-01 | 97.7% | 82.4% |
| 3552839 | 11.1.1.795 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › FANCAA | 0.54 | 41.0 | 3.91e-01 | 84.1% | 100.0% |
| 3480347 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 44.0 | 4.14e-01 | 90.9% | 88.2% |
| 5022644 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.53 | 41.0 | 4.01e-01 | 84.1% | 80.0% |
| 3478734 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 45.0 | 4.07e-01 | 94.3% | 90.8% |
| 5081039 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 45.0 | 4.39e-01 | 93.2% | 91.6% |
| 3403058 | 11.1.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin | 0.52 | 43.0 | 4.04e-01 | 94.3% | 87.0% |
| 3601399 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.52 | 44.0 | 3.53e-01 | 100.0% | 70.0% |
| 3267247 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.52 | 43.0 | 3.79e-01 | 95.5% | 84.3% |
| 3609295 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.51 | 42.0 | 3.90e-01 | 95.5% | 69.6% |
| 3526482 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.51 | 41.0 | 3.98e-01 | 90.9% | 88.6% |
| 3743265 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.51 | 41.0 | 3.74e-01 | 94.3% | 84.6% |
D3
medium
residues 56-162
Domain cluster:
rep: IMGVR_UViG_3300002821_000004-3300002821-Iso3TCLC_1000013819__D157-192_317-378
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4nx9A02 | 2.60.40.4390 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.72 | 66.0 | 6.31e-01 | 100.0% | 94.2% |
| 2h6oA03 | 2.60.40.2820 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 50.0 | 4.97e-01 | 100.0% | 90.0% |
| 4a0tA03 | 2.60.320.30 | Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › | 0.58 | 40.0 | 4.27e-01 | 82.2% | 83.3% |
| 1dd5A02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.56 | 35.0 | 4.00e-01 | 86.9% | 88.0% |
| 6h4lA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 39.0 | 4.13e-01 | 100.0% | 82.3% |
| 4gi3C00 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.56 | 25.0 | 3.24e-01 | 70.1% | 73.7% |
| 3pucA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 40.0 | 4.12e-01 | 100.0% | 81.6% |
| 2rikA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 39.0 | 4.14e-01 | 100.0% | 83.3% |
| 1qr4A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 37.0 | 4.04e-01 | 99.1% | 87.4% |
| 5x7qA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 44.0 | 4.18e-01 | 87.9% | 96.1% |
| 4h8wC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 33.0 | 3.80e-01 | 95.3% | 86.7% |
| 1fhgA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 39.0 | 3.98e-01 | 100.0% | 80.4% |
| 2dchX02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.53 | 38.0 | 3.78e-01 | 100.0% | 71.2% |
| 3a21A03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 40.0 | 4.18e-01 | 86.9% | 85.1% |
| 1s2oA02 | 3.90.1070.10 | Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › | 0.53 | 32.0 | 3.74e-01 | 85.0% | 90.1% |
| 2cqvA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 3.77e-01 | 100.0% | 71.9% |
| 2c9kA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 41.0 | 3.66e-01 | 90.7% | 86.6% |
| 2waaA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 40.0 | 3.84e-01 | 88.8% | 74.0% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4298574 | 3019.1.1.1 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN | 0.80 | 70.0 | 7.30e-01 | 95.3% | 100.0% |
| 4368682 | 3019.1.1.1 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN | 0.78 | 66.0 | 6.97e-01 | 90.7% | 100.0% |
| 4095714 | 3019.1.1.1 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN | 0.78 | 71.0 | 7.04e-01 | 97.2% | 100.0% |
| 4078982 | 3019.1.1.1 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN | 0.77 | 70.0 | 6.53e-01 | 98.1% | 100.0% |
| 4602558 | 3019.1.1.1 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN | 0.75 | 68.0 | 6.54e-01 | 98.1% | 100.0% |
| 4458090 | 3019.1.1.0 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain | 0.73 | 64.0 | 6.21e-01 | 94.4% | 100.0% |
| 4343263 | 3019.1.1.1 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN | 0.73 | 65.0 | 6.07e-01 | 97.2% | 100.0% |
| 4302659 | 3019.1.1.0 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain | 0.72 | 66.0 | 6.35e-01 | 100.0% | 100.0% |
| 3387496 | 3019.1.1.1 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN | 0.70 | 61.0 | 6.34e-01 | 97.2% | 100.0% |
| 3967714 | 241.1.1.6 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › YbjN | 0.62 | 44.0 | 4.01e-01 | 88.8% | 56.4% |
| 3952661 | 241.1.1.6 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › YbjN | 0.59 | 42.0 | 3.65e-01 | 89.7% | 47.1% |
| 185630 | 3386.1.1.2 ↗ | beta sandwiches › gp9 C-terminal domain-like › gp9 C-terminal domain-related › gp9 C-terminal domain-related › gp37_C | 0.59 | 40.0 | 4.29e-01 | 82.2% | 83.1% |
| 3902274 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.55 | 46.0 | 4.65e-01 | 100.0% | 92.7% |
| 3176569 | 76.1.1.9 ↗ | beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I › Metallopep | 0.55 | 36.0 | 3.70e-01 | 99.1% | 71.0% |
| 4979757 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.54 | 44.0 | 3.90e-01 | 91.6% | 61.0% |
| 3970893 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.54 | 30.0 | 3.70e-01 | 82.2% | 95.0% |
| 3889990 | 11.1.1.396 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Anth_Ig | 0.53 | 40.0 | 3.85e-01 | 100.0% | 69.1% |
| 3621288 | 11.1.4.16 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › EMC7_beta-sandw | 0.53 | 37.0 | 3.31e-01 | 100.0% | 49.7% |
| 5045407 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.53 | 44.0 | 4.10e-01 | 88.8% | 97.7% |
| 4979756 | 241.1.1.6 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › YbjN | 0.52 | 43.0 | 4.00e-01 | 92.5% | 70.4% |
| 3415385 | 11.2.1.31 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF4788 | 0.52 | 37.0 | 3.49e-01 | 74.8% | 96.3% |
| 5058917 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.52 | 43.0 | 4.12e-01 | 89.7% | 97.6% |
| 3517868 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.51 | 37.0 | 3.26e-01 | 77.6% | 92.7% |
| 4122799 | 4004.1.1.3 ↗ | beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD_kinase_C | 0.50 | 45.0 | 3.97e-01 | 100.0% | 80.6% |
| 3938246 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 34.0 | 3.86e-01 | 93.5% | 93.8% |
| 4943858 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.50 | 42.0 | 4.00e-01 | 91.6% | 100.0% |