SRR1747018_scaffold_0_prodigal-single.1XX__00005

Bact-Vir

SRR1747018_scaffold_0_prodigal-single.1__X__X__00005

Identity

76.9 mean pLDDT

Singleton — not in a non-trivial cluster

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 2-80

PDB

Domain cluster: representative

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3veaA02	1.10.1220.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like	0.67	43.0	5.12e-01	79.7%	100.0%
5kbwB00	1.10.1760.20	Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 ›	0.59	40.0	3.15e-01	73.4%	32.2%
2ethA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.58	42.0	3.48e-01	75.9%	53.9%
7d1tA01	1.20.85.10	Mainly Alpha › Up-down Bundle › Photosynthetic Reaction Center, subunit M; domain 1 › Photosystem II protein D1-like	0.57	43.0	3.29e-01	81.0%	39.6%
7ymiD01	1.20.85.10	Mainly Alpha › Up-down Bundle › Photosynthetic Reaction Center, subunit M; domain 1 › Photosystem II protein D1-like	0.56	43.0	3.26e-01	81.0%	41.7%
7dvrA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.56	42.0	3.49e-01	79.7%	55.3%
2d1hB00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.51	37.0	3.47e-01	77.2%	62.2%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4024271	3871.1.1.1 ↗	alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN	0.60	47.0	3.90e-01	82.3%	91.1%
4231284	192.7.1.2 ↗	alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N	0.60	46.0	4.07e-01	79.7%	58.2%