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SRR1747018_scaffold_0_prodigal-single.1__X__X__00111
Bact-VirSRR1747018_scaffold_0_prodigal-single.1__X__X__00111
Identity
- Kingdom:
- phage
Quality
51.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-76
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08220.19 best | HTH_DeoR | 21.7 | 1.90e-04 | 70.2% | 52.6% |
| PF00196.26 | GerE | 26.7 | 4.90e-06 | 64.9% | 54.4% |
CATH (92)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2x48A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.95 | 64.0 | 6.63e-01 | 71.9% | 74.1% |
| 1ku3A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.91 | 66.0 | 6.44e-01 | 75.4% | 78.7% |
| 2lfwA01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.90 | 67.0 | 4.87e-01 | 78.9% | 34.0% |
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.89 | 69.0 | 6.64e-01 | 80.7% | 73.0% |
| 4nqwA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.89 | 64.0 | 6.16e-01 | 75.4% | 68.8% |
| 3hugA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.89 | 65.0 | 5.76e-01 | 77.2% | 58.7% |
| 3zh9B03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.89 | 72.0 | 5.40e-01 | 89.5% | 38.9% |
| 4go1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 75.0 | 7.73e-01 | 89.5% | 94.4% |
| 3p7nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 74.0 | 6.79e-01 | 89.5% | 77.8% |
| 6v7xB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 72.0 | 7.27e-01 | 87.7% | 98.2% |
| 4a0zA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 63.0 | 6.29e-01 | 77.2% | 78.0% |
| 1a04A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 73.0 | 6.43e-01 | 91.2% | 70.0% |
| 6uglB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 67.0 | 6.72e-01 | 84.2% | 89.7% |
| 1r71A01 | 1.10.10.730 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain | 0.84 | 62.0 | 6.34e-01 | 78.9% | 80.4% |
| 6cc0A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 71.0 | 6.60e-01 | 91.2% | 81.4% |
| 6jqsA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 73.0 | 6.90e-01 | 94.7% | 97.0% |
| 5xsoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 70.0 | 6.31e-01 | 91.2% | 80.3% |
| 2jn6A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.83 | 59.0 | 5.13e-01 | 75.4% | 63.5% |
| 4gvpA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.83 | 70.0 | 4.64e-01 | 91.2% | 27.2% |
| 1l3lA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 68.0 | 6.61e-01 | 89.5% | 88.9% |
| 5y2vC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 67.0 | 5.80e-01 | 87.7% | 76.5% |
| 3iuoA00 | 1.10.10.1390 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ | 0.82 | 68.0 | 5.46e-01 | 93.0% | 47.7% |
| 2q0oA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 74.0 | 6.94e-01 | 96.5% | 97.0% |
| 1p4wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 67.0 | 5.77e-01 | 89.5% | 63.2% |
| 5y9sC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 66.0 | 5.78e-01 | 87.7% | 79.3% |
| 1k78A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 63.0 | 6.02e-01 | 87.7% | 72.7% |
| 3ulqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 68.0 | 6.81e-01 | 91.2% | 98.3% |
| 2r0qC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.80 | 58.0 | 5.90e-01 | 77.2% | 90.9% |
| 2lvsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.79 | 65.0 | 6.61e-01 | 100.0% | 92.9% |
| 2esnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 65.0 | 5.58e-01 | 91.2% | 74.2% |
| 3szpA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 62.0 | 5.33e-01 | 89.5% | 73.0% |
| 4kmfA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 64.0 | 6.29e-01 | 94.7% | 100.0% |
| 5z4zC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 66.0 | 5.66e-01 | 96.5% | 78.4% |
| 7pzaA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 63.0 | 5.45e-01 | 91.2% | 84.9% |
| 2cfxA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 59.0 | 6.20e-01 | 89.5% | 96.0% |
| 2dbbB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 64.0 | 6.51e-01 | 94.7% | 96.4% |
| 4i2oA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 60.0 | 5.39e-01 | 89.5% | 83.7% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 59.0 | 5.69e-01 | 91.2% | 77.6% |
| 5cvrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 59.0 | 5.16e-01 | 87.7% | 82.1% |
| 2ia0A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 62.0 | 6.35e-01 | 96.5% | 98.1% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.73 | 61.0 | 5.12e-01 | 91.2% | 59.6% |
| 1jhgA00 | 1.10.1270.10 | Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like | 0.73 | 63.0 | 5.26e-01 | 100.0% | 61.4% |
| 5tjjA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 62.0 | 5.73e-01 | 96.5% | 94.5% |
| 3frwB00 | 1.10.1270.10 | Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like | 0.72 | 63.0 | 5.35e-01 | 100.0% | 62.5% |
| 1ft9A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 61.0 | 5.44e-01 | 93.0% | 91.1% |
| 4yifF00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 61.0 | 4.68e-01 | 94.7% | 50.0% |
| 1xd7A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 61.0 | 4.86e-01 | 94.7% | 53.4% |
| 1z05A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 61.0 | 5.69e-01 | 96.5% | 100.0% |
| 3bj6B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 62.0 | 4.58e-01 | 98.2% | 52.3% |
| 4wcgA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 62.0 | 6.06e-01 | 96.5% | 98.4% |
| 4rgxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 61.0 | 4.67e-01 | 98.2% | 50.7% |
| 2xkoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 61.0 | 5.16e-01 | 94.7% | 77.7% |
| 2gauA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 60.0 | 5.31e-01 | 93.0% | 87.7% |
| 1b9mB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 60.0 | 5.00e-01 | 94.7% | 68.7% |
| 7l1iA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 63.0 | 4.59e-01 | 100.0% | 52.3% |
| 3oopA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 61.0 | 4.67e-01 | 98.2% | 53.0% |
| 4hw0C00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 58.0 | 5.03e-01 | 94.7% | 69.9% |
| 3bhqA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.71 | 61.0 | 4.18e-01 | 98.2% | 50.5% |
| 4nb5B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 63.0 | 5.51e-01 | 100.0% | 85.9% |
| 2nriB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 60.0 | 5.15e-01 | 96.5% | 71.7% |
| 2o7tA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.70 | 61.0 | 4.29e-01 | 98.2% | 51.9% |
| 2l02A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 60.0 | 5.39e-01 | 98.2% | 86.6% |
| 3ecoB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 60.0 | 4.68e-01 | 98.2% | 55.0% |
| 1ku9B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 61.0 | 5.37e-01 | 100.0% | 82.8% |
| 4ijaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 60.0 | 5.82e-01 | 96.5% | 100.0% |
| 3c07B00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.70 | 60.0 | 4.07e-01 | 98.2% | 45.8% |
| 3e6mA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 59.0 | 4.43e-01 | 98.2% | 49.3% |
| 2r3sB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 59.0 | 5.27e-01 | 96.5% | 77.8% |
| 3s2wG00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 60.0 | 4.62e-01 | 100.0% | 55.6% |
| 2m8gX00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.69 | 54.0 | 5.09e-01 | 91.2% | 70.0% |
| 2qwwC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 59.0 | 4.51e-01 | 100.0% | 51.4% |
| 4rs8A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 59.0 | 5.21e-01 | 98.2% | 79.8% |
| 4fx0A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 58.0 | 4.55e-01 | 96.5% | 51.6% |
| 2qwtA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.68 | 60.0 | 4.30e-01 | 100.0% | 58.1% |
| 2xubA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 59.0 | 5.32e-01 | 98.2% | 83.3% |
| 1hw1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 58.0 | 5.34e-01 | 96.5% | 93.3% |
| 3f2gA00 | 3.30.450.410 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.67 | 57.0 | 3.92e-01 | 96.5% | 37.1% |
| 3r4kB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 58.0 | 5.62e-01 | 98.2% | 98.4% |
| 3cuoD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 57.0 | 4.84e-01 | 96.5% | 67.0% |
| 2fa5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 58.0 | 4.41e-01 | 100.0% | 51.8% |
| 2dk5A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 57.0 | 5.47e-01 | 98.2% | 100.0% |
| 3g3zA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 56.0 | 5.42e-01 | 94.7% | 100.0% |
| 4a6dA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 57.0 | 4.83e-01 | 96.5% | 70.2% |
| 2k9lA00 | 1.10.10.1330 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA polymerase sigma-54 factor, core-binding domain | 0.66 | 52.0 | 4.73e-01 | 86.0% | 65.8% |
| 3h4cA02 | 1.10.472.110 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › | 0.66 | 53.0 | 4.37e-01 | 91.2% | 90.9% |
| 3f8mA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 56.0 | 5.37e-01 | 93.0% | 96.9% |
| 3ppbA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.65 | 56.0 | 3.96e-01 | 100.0% | 52.7% |
| 5fglA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.63 | 50.0 | 3.53e-01 | 91.2% | 51.5% |
| 4nn1A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.63 | 51.0 | 3.60e-01 | 96.5% | 45.4% |
| 2qibB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.59 | 48.0 | 3.38e-01 | 98.2% | 71.6% |
| 2ao9I01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.58 | 47.0 | 4.22e-01 | 96.5% | 63.2% |
| 3nxcA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 47.0 | 3.43e-01 | 96.5% | 53.1% |
ECOD (99)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4976095 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.93 | 67.0 | 6.88e-01 | 78.9% | 78.2% |
| 5020571 | 101.1.1.101 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 | 0.91 | 76.0 | 6.07e-01 | 93.0% | 48.6% |
| 3283589 | 101.1.1.368 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 | 0.90 | 69.0 | 7.32e-01 | 91.2% | 92.0% |
| 4071326 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.90 | 75.0 | 6.54e-01 | 87.7% | 76.2% |
| 3283500 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.90 | 75.0 | 7.95e-01 | 87.7% | 100.0% |
| 3287232 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.89 | 65.0 | 5.89e-01 | 77.2% | 58.7% |
| 235968 | 138.1.1.9 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_delta_C | 0.89 | 72.0 | 5.42e-01 | 89.5% | 39.2% |
| 5070354 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.89 | 68.0 | 5.98e-01 | 80.7% | 57.5% |
| 4952807 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.89 | 71.0 | 6.44e-01 | 86.0% | 66.7% |
| 4541333 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.88 | 69.0 | 7.34e-01 | 84.2% | 94.0% |
| 3990848 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.87 | 68.0 | 6.91e-01 | 89.5% | 85.5% |
| 4992862 | 101.1.6.12 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_23 | 0.87 | 66.0 | 5.98e-01 | 80.7% | 61.3% |
| 4944887 | 101.1.1.546 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › ThiN | 0.87 | 79.0 | 5.98e-01 | 96.5% | 53.3% |
| 5077769 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.87 | 69.0 | 7.36e-01 | 87.7% | 96.0% |
| 3879118 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.86 | 67.0 | 6.87e-01 | 87.7% | 85.5% |
| 5003692 | 101.1.6.12 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_23 | 0.86 | 65.0 | 6.25e-01 | 80.7% | 70.8% |
| 4131887 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.86 | 73.0 | 6.45e-01 | 91.2% | 72.2% |
| 3286174 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.86 | 72.0 | 6.46e-01 | 89.5% | 74.7% |
| 3279743 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.85 | 73.0 | 6.76e-01 | 91.2% | 95.7% |
| 3953111 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.85 | 77.0 | 7.20e-01 | 100.0% | 88.6% |
| 4982076 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.84 | 71.0 | 5.22e-01 | 91.2% | 86.4% |
| 4007717 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.84 | 71.0 | 6.29e-01 | 91.2% | 71.2% |
| 5004314 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.84 | 63.0 | 5.75e-01 | 80.7% | 61.3% |
| 4241531 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.84 | 70.0 | 6.48e-01 | 89.5% | 78.6% |
| 4974140 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.84 | 71.0 | 5.71e-01 | 89.5% | 56.0% |
| 4973199 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.83 | 67.0 | 6.64e-01 | 93.0% | 83.3% |
| 5057202 | 101.1.3.8 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4_2 | 0.83 | 71.0 | 6.59e-01 | 91.2% | 81.4% |
| 2475319 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.83 | 73.0 | 6.90e-01 | 94.7% | 97.0% |
| 3693390 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.81 | 66.0 | 6.54e-01 | 93.0% | 85.0% |
| 3966780 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 69.0 | 5.84e-01 | 91.2% | 74.4% |
| 3289034 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.81 | 70.0 | 6.76e-01 | 93.0% | 100.0% |
| 4010187 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.81 | 70.0 | 5.99e-01 | 94.7% | 76.7% |
| 3619451 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 67.0 | 6.40e-01 | 91.2% | 76.9% |
| 3976103 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.81 | 69.0 | 6.57e-01 | 91.2% | 92.3% |
| 4998511 | 101.1.1.9 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_3 | 0.80 | 74.0 | 6.03e-01 | 96.5% | 70.5% |
| 4551350 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.80 | 71.0 | 5.87e-01 | 94.7% | 61.1% |
| 4664006 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.80 | 68.0 | 5.77e-01 | 91.2% | 74.4% |
| 3967992 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.80 | 71.0 | 5.85e-01 | 94.7% | 71.6% |
| 4143289 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.80 | 65.0 | 6.69e-01 | 89.5% | 94.5% |
| 3988724 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 63.0 | 6.18e-01 | 84.2% | 80.0% |
| 4653037 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.80 | 69.0 | 5.44e-01 | 98.2% | 60.8% |
| 5002651 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.80 | 69.0 | 5.79e-01 | 96.5% | 94.7% |
| 4964802 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 61.0 | 6.01e-01 | 84.2% | 80.0% |
| 4945039 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.79 | 61.0 | 6.00e-01 | 86.0% | 78.3% |
| 1035813 | 101.1.6.2 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_7 | 0.79 | 66.0 | 6.83e-01 | 100.0% | 100.0% |
| 3977377 | 101.1.2.836 ↗ | alpha arrays › HTH › HTH › winged helix domain › Terminase_5 | 0.79 | 63.0 | 5.01e-01 | 87.7% | 45.7% |
| 4458965 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.79 | 70.0 | 6.23e-01 | 98.2% | 81.2% |
| 3509240 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.79 | 61.0 | 5.83e-01 | 86.0% | 72.3% |
| 3968396 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.78 | 70.0 | 5.90e-01 | 96.5% | 75.6% |
| 5039074 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.78 | 72.0 | 5.65e-01 | 96.5% | 60.0% |
| 3982869 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.78 | 68.0 | 5.86e-01 | 94.7% | 78.8% |
| 3280686 | 101.1.3.4 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 | 0.78 | 68.0 | 5.60e-01 | 96.5% | 62.0% |
| 4135755 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.78 | 67.0 | 5.72e-01 | 94.7% | 74.4% |
| 4133453 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 64.0 | 6.54e-01 | 93.0% | 94.5% |
| 5062183 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 62.0 | 5.66e-01 | 96.5% | 66.7% |
| 3981659 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.77 | 69.0 | 5.87e-01 | 98.2% | 76.7% |
| 5055912 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 65.0 | 6.11e-01 | 98.2% | 75.7% |
| 5060354 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 64.0 | 6.11e-01 | 98.2% | 80.0% |
| 4998812 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.77 | 66.0 | 6.32e-01 | 94.7% | 81.5% |
| 5079698 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.77 | 65.0 | 6.41e-01 | 93.0% | 86.7% |
| 5073937 | 101.1.2.899 ↗ | alpha arrays › HTH › HTH › winged helix domain › Zn_Ribbon_1 | 0.77 | 60.0 | 4.72e-01 | 89.5% | 41.7% |
| 4206579 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.77 | 67.0 | 5.56e-01 | 94.7% | 72.6% |
| 3973615 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.77 | 59.0 | 5.68e-01 | 82.5% | 73.8% |
| 5052214 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 67.0 | 5.08e-01 | 98.2% | 43.2% |
| 5055914 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 65.0 | 6.62e-01 | 96.5% | 96.4% |
| 3946548 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.76 | 66.0 | 5.61e-01 | 94.7% | 74.4% |
| 5031306 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.76 | 63.0 | 6.44e-01 | 96.5% | 94.5% |
| 4979728 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 65.0 | 5.64e-01 | 94.7% | 62.4% |
| 5070991 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.76 | 63.0 | 5.88e-01 | 91.2% | 88.6% |
| 5025923 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.76 | 64.0 | 5.62e-01 | 94.7% | 84.7% |
| 4948833 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 61.0 | 6.42e-01 | 93.0% | 100.0% |
| 3290297 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.75 | 66.0 | 5.86e-01 | 96.5% | 83.7% |
| 5058606 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 66.0 | 6.02e-01 | 96.5% | 74.7% |
| 4953897 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 63.0 | 5.20e-01 | 93.0% | 84.0% |
| 3946019 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.75 | 64.0 | 5.50e-01 | 94.7% | 75.6% |
| 4090141 | 101.1.1.494 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_29 | 0.75 | 55.0 | 5.48e-01 | 78.9% | 76.7% |
| 5062184 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.74 | 61.0 | 6.07e-01 | 98.2% | 86.7% |
| 5038636 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.74 | 65.0 | 5.86e-01 | 100.0% | 87.5% |
| 4081576 | 101.1.6.1 ↗ | alpha arrays › HTH › HTH › TrpR › Trp_repressor | 0.74 | 67.0 | 5.60e-01 | 100.0% | 61.1% |
| 5057140 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 59.0 | 5.86e-01 | 89.5% | 100.0% |
| 4980944 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 60.0 | 5.40e-01 | 96.5% | 65.0% |
| 3603167 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.74 | 65.0 | 6.25e-01 | 98.2% | 83.1% |
| 4391758 | 101.1.6.1 ↗ | alpha arrays › HTH › HTH › TrpR › Trp_repressor | 0.73 | 66.0 | 5.52e-01 | 100.0% | 61.1% |
| 5047331 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 60.0 | 5.20e-01 | 96.5% | 57.8% |
| 4968115 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 64.0 | 6.02e-01 | 98.2% | 81.4% |
| 5046349 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.72 | 61.0 | 5.87e-01 | 94.7% | 81.5% |
| 5018001 | 101.1.2.15 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR | 0.72 | 60.0 | 4.58e-01 | 93.0% | 50.7% |
| 5038587 | 101.1.6.12 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_23 | 0.72 | 56.0 | 5.52e-01 | 84.2% | 83.3% |
| 5038207 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 61.0 | 4.93e-01 | 100.0% | 56.7% |
| 4994602 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.71 | 48.0 | 4.80e-01 | 73.7% | 68.3% |
| 4938723 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.70 | 60.0 | 4.62e-01 | 96.5% | 53.8% |
| 5031872 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 56.0 | 5.55e-01 | 98.2% | 88.3% |
| 3955776 | 101.1.2.110 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_IclR | 0.68 | 59.0 | 5.22e-01 | 100.0% | 74.1% |
| 3964047 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.67 | 58.0 | 4.68e-01 | 96.5% | 90.0% |
| 3964524 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.67 | 58.0 | 4.11e-01 | 96.5% | 93.7% |
| 3963336 | 2484.1.1.107 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS1595 | 0.67 | 58.0 | 3.91e-01 | 96.5% | 94.9% |
| 3964882 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.67 | 58.0 | 4.40e-01 | 96.5% | 91.9% |
| 3963536 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.67 | 58.0 | 4.63e-01 | 98.2% | 91.3% |
| 4945903 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 54.0 | 5.49e-01 | 100.0% | 98.2% |
D2
medium
residues 239-285