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SRR1747018_scaffold_0_prodigal-single.1__X__X__00114
Bact-VirSRR1747018_scaffold_0_prodigal-single.1__X__X__00114
Identity
- Kingdom:
- phage
Quality
60.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 122-204
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2oarB00 | 1.10.1200.120 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Large-conductance mechanosensitive channel, MscL; domain 1 | 0.75 | 37.0 | 3.17e-01 | 77.1% | 32.0% |
| 1zswA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.54 | 34.0 | 2.66e-01 | 71.1% | 29.2% |
| 2ei0A02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.53 | 32.0 | 2.71e-01 | 77.1% | 32.9% |
| 6scxC01 | 3.90.79.20 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › | 0.52 | 36.0 | 2.97e-01 | 73.5% | 62.8% |
| 2wojC00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 39.0 | 2.79e-01 | 84.3% | 64.1% |
| 1yu9A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 35.0 | 2.89e-01 | 71.1% | 97.6% |
| 3regA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 36.0 | 2.93e-01 | 74.7% | 97.7% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3280466 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.65 | 37.0 | 2.78e-01 | 98.8% | 24.2% |
| 4578080 | 221.2.1.2 ↗ | a+b two layers › beta-Grasp › IF3-N › IF3-N › mIF3 | 0.64 | 44.0 | 4.33e-01 | 72.3% | 80.0% |
| 4344731 | 221.2.1.2 ↗ | a+b two layers › beta-Grasp › IF3-N › IF3-N › mIF3 | 0.60 | 43.0 | 4.22e-01 | 75.9% | 84.4% |
| 3542662 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.56 | 52.0 | 3.85e-01 | 100.0% | 89.0% |
| 3701819 | 221.2.1.0 ↗ | a+b two layers › beta-Grasp › IF3-N › IF3-N | 0.56 | 45.0 | 4.20e-01 | 90.4% | 86.4% |
| 3169613 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 42.0 | 4.02e-01 | 81.9% | 98.0% |
| 4927437 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 38.0 | 4.15e-01 | 72.3% | 97.1% |
| 3285723 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.55 | 40.0 | 3.10e-01 | 75.9% | 93.1% |
| 2402651 | 237.1.1.8 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox | 0.54 | 44.0 | 3.31e-01 | 88.0% | 46.0% |
| 3275203 | 221.2.1.1 ↗ | a+b two layers › beta-Grasp › IF3-N › IF3-N › IF3_N | 0.54 | 41.0 | 4.10e-01 | 83.1% | 83.5% |
| 3474960 | 63.1.1.8 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › PRKCSH, PRKCSH_1 | 0.53 | 42.0 | 3.10e-01 | 84.3% | 80.0% |
| 3320903 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 42.0 | 4.01e-01 | 86.7% | 81.0% |
| 3250105 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.51 | 44.0 | 3.28e-01 | 97.6% | 96.4% |