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SRR1747018_scaffold_0_prodigal-single.1__X__X__00152
Bact-VirSRR1747018_scaffold_0_prodigal-single.1__X__X__00152
Identity
- Kingdom:
- phage
Quality
42.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-59
Domain cluster:
rep: SRR1747052_scaffold_19_prodigal-single.1__X__X__00019__D7-61
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kswA01 | 3.30.1490.260 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.59 | 38.0 | 4.07e-01 | 71.2% | 84.8% |
| 1wh2A01 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.57 | 39.0 | 3.93e-01 | 74.6% | 73.8% |
| 3weeA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 41.0 | 3.12e-01 | 91.5% | 79.8% |
| 4dqnA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.54 | 44.0 | 3.22e-01 | 89.8% | 36.7% |
| 5jtwA03 | 2.60.40.1940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 36.0 | 2.94e-01 | 74.6% | 61.4% |
| 3iwzA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 47.0 | 3.54e-01 | 98.3% | 97.8% |
| 2zcwA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 45.0 | 3.60e-01 | 96.6% | 79.5% |
| 4iajA00 | 3.30.1490.390 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Protein of unknown function DUF4649 | 0.51 | 32.0 | 2.94e-01 | 86.4% | 47.4% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4304758 | 2010.1.1.1 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › DegV | 0.64 | 50.0 | 3.76e-01 | 88.1% | 85.8% |
| 3587162 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 53.0 | 3.94e-01 | 98.3% | 70.6% |
| 3272931 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.59 | 40.0 | 3.34e-01 | 93.2% | 40.0% |
| 3783311 | 245.1.1.0 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 | 0.54 | 47.0 | 3.90e-01 | 96.6% | 55.2% |
| 3783191 | 223.2.1.9 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Sedlin_N | 0.53 | 46.0 | 3.11e-01 | 93.2% | 35.1% |
| 3265486 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.51 | 44.0 | 2.98e-01 | 93.2% | 40.7% |
D2
medium
residues 171-262