←Back to structures
SRR1747018_scaffold_0_prodigal-single.1__X__X__00175
Bact-VirSRR1747018_scaffold_0_prodigal-single.1__X__X__00175
Identity
- Kingdom:
- phage
Quality
77.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-82
Domain cluster:
rep: MK448232.1__QBP28427.1__X__00008__D312-377
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1tfkA00 | 3.10.450.200 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.73 | 48.0 | 4.31e-01 | 100.0% | 48.9% |
| 7ccbA01 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.69 | 58.0 | 4.55e-01 | 94.0% | 64.8% |
| 4ym3C00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 58.0 | 4.60e-01 | 94.0% | 70.0% |
| 1a78A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 58.0 | 4.62e-01 | 94.0% | 74.6% |
| 1c1fA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 57.0 | 4.57e-01 | 94.0% | 72.6% |
| 1hlcA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 56.0 | 4.57e-01 | 94.0% | 74.4% |
| 3ligA02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.66 | 55.0 | 4.16e-01 | 94.0% | 67.5% |
| 2r16A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 54.0 | 4.09e-01 | 94.0% | 52.0% |
| 1st8A02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.66 | 55.0 | 4.05e-01 | 95.5% | 72.1% |
| 2wkkA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 54.0 | 4.21e-01 | 94.0% | 65.3% |
| 2wjsA03 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 51.0 | 4.00e-01 | 92.5% | 52.8% |
| 1uwvA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 44.0 | 4.28e-01 | 100.0% | 65.8% |
| 1gbgA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 52.0 | 3.74e-01 | 92.5% | 47.2% |
| 3pweA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.63 | 53.0 | 4.41e-01 | 95.5% | 95.1% |
| 3hr6A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 44.0 | 3.55e-01 | 73.1% | 92.5% |
| 3jclA01 | 2.60.120.960 | Mainly Beta › Sandwich › Jelly Rolls › Spike glycoprotein, N-terminal domain | 0.63 | 51.0 | 3.45e-01 | 92.5% | 45.3% |
| 3gd0A02 | 3.30.920.50 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain | 0.62 | 47.0 | 3.99e-01 | 100.0% | 49.1% |
| 5h4eA02 | 3.30.920.50 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain | 0.62 | 45.0 | 3.73e-01 | 100.0% | 43.7% |
| 5ocqA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 52.0 | 3.47e-01 | 94.0% | 46.1% |
| 1ei5A03 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.61 | 42.0 | 3.66e-01 | 100.0% | 47.1% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.61 | 41.0 | 2.99e-01 | 100.0% | 24.5% |
| 1ms5B02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 51.0 | 3.50e-01 | 94.0% | 38.1% |
| 7rpyA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 47.0 | 4.12e-01 | 83.6% | 67.0% |
| 1d2sA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 52.0 | 3.94e-01 | 98.5% | 64.7% |
| 4nyqA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.60 | 47.0 | 3.61e-01 | 100.0% | 37.3% |
| 3mezC00 | 2.90.10.10 | Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain | 0.59 | 49.0 | 4.24e-01 | 94.0% | 83.6% |
| 1yezA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 41.0 | 4.11e-01 | 74.6% | 80.9% |
| 2m38A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 53.0 | 4.13e-01 | 100.0% | 68.1% |
| 3db2B02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.57 | 39.0 | 2.80e-01 | 71.6% | 73.4% |
| 2elbA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 47.0 | 4.10e-01 | 100.0% | 60.8% |
| 1k3rA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 40.0 | 4.24e-01 | 77.6% | 93.2% |
| 3a8pB01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 49.0 | 4.10e-01 | 100.0% | 70.7% |
| 7kcgA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.55 | 47.0 | 3.76e-01 | 95.5% | 74.4% |
| 1xeaA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.54 | 36.0 | 2.66e-01 | 70.1% | 78.1% |
| 6i18A04 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.53 | 44.0 | 3.78e-01 | 91.0% | 72.0% |
| 4ghbA00 | 2.40.160.190 | Mainly Beta › Beta Barrel › Porin › | 0.53 | 47.0 | 3.15e-01 | 100.0% | 36.5% |
| 3e9mB02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.52 | 40.0 | 2.95e-01 | 85.1% | 56.1% |
| 1lktA00 | 2.170.14.10 | Mainly Beta › Beta Complex › Tailspike Protein; Chain › Phage P22 tailspike-like, N-terminal domain | 0.52 | 43.0 | 3.70e-01 | 89.6% | 91.3% |
| 8aasC01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 38.0 | 3.41e-01 | 100.0% | 52.9% |
| 1xovA03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 33.0 | 3.24e-01 | 82.1% | 61.1% |
| 3zx7A02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.51 | 43.0 | 3.49e-01 | 97.0% | 70.8% |
| 1wgqA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 44.0 | 3.82e-01 | 100.0% | 67.0% |
| 7dpyB01 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.51 | 38.0 | 3.61e-01 | 85.1% | 67.5% |
| 1go3E01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 44.0 | 3.97e-01 | 100.0% | 76.6% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3956612 | 2.8.1.2 ↗ | beta barrels › OB-fold › mu transposases-C › mu transposases-C › Mu-transpos_C_2 | 0.94 | 74.0 | 8.11e-01 | 89.6% | 100.0% |
| 5018569 | 2.8.1.2 ↗ | beta barrels › OB-fold › mu transposases-C › mu transposases-C › Mu-transpos_C_2 | 0.92 | 72.0 | 7.92e-01 | 89.6% | 100.0% |
| 4486121 | 2.8.1.2 ↗ | beta barrels › OB-fold › mu transposases-C › mu transposases-C › Mu-transpos_C_2 | 0.88 | 79.0 | 7.33e-01 | 100.0% | 78.8% |
| 4335502 | 2.8.1.2 ↗ | beta barrels › OB-fold › mu transposases-C › mu transposases-C › Mu-transpos_C_2 | 0.87 | 72.0 | 6.48e-01 | 97.0% | 65.6% |
| 3955735 | 2.8.1.2 ↗ | beta barrels › OB-fold › mu transposases-C › mu transposases-C › Mu-transpos_C_2 | 0.84 | 73.0 | 7.03e-01 | 100.0% | 84.0% |
| 4575824 | 2.8.1.2 ↗ | beta barrels › OB-fold › mu transposases-C › mu transposases-C › Mu-transpos_C_2 | 0.82 | 77.0 | 7.56e-01 | 100.0% | 97.1% |
| 3700781 | 3794.1.1.0 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit | 0.69 | 44.0 | 3.49e-01 | 94.0% | 33.1% |
| 3715118 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.68 | 58.0 | 4.17e-01 | 100.0% | 34.9% |
| 5014638 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.68 | 56.0 | 4.36e-01 | 92.5% | 56.0% |
| 5026953 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.67 | 49.0 | 4.04e-01 | 77.6% | 99.2% |
| 3287367 | 298.1.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.66 | 42.0 | 2.67e-01 | 94.0% | 15.1% |
| 4926929 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 45.0 | 4.85e-01 | 74.6% | 98.2% |
| 5059099 | 241.2.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like | 0.64 | 42.0 | 3.84e-01 | 100.0% | 51.1% |
| 3183973 | 10.1.1.26 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C | 0.64 | 53.0 | 4.11e-01 | 94.0% | 61.3% |
| 3393983 | 220.1.1.86 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N | 0.63 | 54.0 | 4.50e-01 | 100.0% | 55.5% |
| 4022821 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.63 | 58.0 | 4.27e-01 | 100.0% | 44.8% |
| 3751478 | 220.1.1.86 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N | 0.63 | 54.0 | 5.17e-01 | 100.0% | 81.3% |
| 3707723 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.63 | 57.0 | 4.86e-01 | 100.0% | 62.9% |
| 3467267 | 4.1.1.94 ↗ | beta barrels › SH3 › SH3 › SH3 › SAWADEE | 0.63 | 43.0 | 4.44e-01 | 97.0% | 75.4% |
| 4434571 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.62 | 42.0 | 4.18e-01 | 97.0% | 67.1% |
| 4994305 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.62 | 43.0 | 4.24e-01 | 100.0% | 66.2% |
| 2036559 | 3484.1.1.2 ↗ | a+b two layers › Laminaripentaose-producing beta-1,3-glucanase insertion domain › Laminaripentaose-producing beta-1,3-glucanase insertion domain › Laminaripentaose-producing beta-1,3-glucanase insertion domain › Glyco_hydro_64 | 0.62 | 47.0 | 3.51e-01 | 100.0% | 32.4% |
| 4660839 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.62 | 43.0 | 4.35e-01 | 98.5% | 73.8% |
| 3247469 | 220.1.1.161 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26659 | 0.62 | 57.0 | 4.57e-01 | 100.0% | 55.2% |
| 4289541 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.62 | 43.0 | 4.19e-01 | 100.0% | 65.3% |
| 3712932 | 220.1.1.263 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_29 | 0.62 | 57.0 | 4.23e-01 | 100.0% | 43.2% |
| 4502854 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.61 | 44.0 | 4.36e-01 | 76.1% | 84.3% |
| 3403716 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 57.0 | 4.58e-01 | 100.0% | 71.7% |
| 4241462 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.61 | 42.0 | 4.30e-01 | 98.5% | 73.8% |
| 3510739 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.61 | 42.0 | 4.32e-01 | 100.0% | 75.4% |
| 3478678 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 55.0 | 5.26e-01 | 100.0% | 85.3% |
| 4242366 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.61 | 43.0 | 4.14e-01 | 76.1% | 70.0% |
| 3570691 | 220.1.1.208 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF28207 | 0.60 | 54.0 | 4.56e-01 | 98.5% | 86.4% |
| 3777243 | 220.1.1.161 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26659 | 0.60 | 55.0 | 4.32e-01 | 100.0% | 51.1% |
| 4110310 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.60 | 43.0 | 4.35e-01 | 76.1% | 86.2% |
| 3928305 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.60 | 49.0 | 3.50e-01 | 94.0% | 41.4% |
| 4599895 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 42.0 | 4.30e-01 | 76.1% | 87.7% |
| 5009633 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 52.0 | 4.73e-01 | 100.0% | 73.3% |
| 3630433 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 53.0 | 4.40e-01 | 100.0% | 60.0% |
| 3742002 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.58 | 49.0 | 3.21e-01 | 100.0% | 21.2% |
| 4404721 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 41.0 | 4.21e-01 | 76.1% | 86.2% |
| 3217981 | 2484.1.1.200 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH | 0.58 | 40.0 | 2.98e-01 | 98.5% | 28.2% |
| 3337373 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.58 | 44.0 | 3.20e-01 | 82.1% | 35.7% |
| 3776367 | 5.1.4.47 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PHTB1_N | 0.58 | 47.0 | 3.33e-01 | 91.0% | 35.8% |
| 4452140 | 6.1.1.11 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Fascin | 0.55 | 48.0 | 4.05e-01 | 98.5% | 72.2% |
| 2031933 | 6.1.1.3 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › IL1 | 0.55 | 47.0 | 3.57e-01 | 95.5% | 63.7% |
| 5046207 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 48.0 | 3.21e-01 | 100.0% | 26.7% |
| 5055532 | 5.1.4.668 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_CGLA | 0.54 | 49.0 | 3.00e-01 | 100.0% | 19.8% |
| 4264254 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.52 | 40.0 | 3.87e-01 | 100.0% | 74.7% |
| 4045978 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.52 | 41.0 | 4.15e-01 | 100.0% | 89.2% |
| 4143581 | 9.2.1.8 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › PF27487 | 0.51 | 44.0 | 3.70e-01 | 98.5% | 75.0% |
| 4337382 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.51 | 39.0 | 3.79e-01 | 100.0% | 76.0% |
| 5063097 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 35.0 | 3.55e-01 | 100.0% | 72.9% |