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SRR1747018_scaffold_0_prodigal-single.1__X__X__00221
Bact-VirSRR1747018_scaffold_0_prodigal-single.1__X__X__00221
Identity
- Kingdom:
- phage
Quality
74.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 53-290
Domain cluster:
rep: term1_saliva_scaffold_14_prodigal-single.1__X__X__00045__D59-270
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5bkaE01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.73 | 42.0 | 5.52e-01 | 88.2% | 100.0% |
| 2f86B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.73 | 40.0 | 5.40e-01 | 89.1% | 99.2% |
| 2cc3A00 | 3.10.450.230 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein | 0.72 | 43.0 | 5.48e-01 | 89.9% | 96.5% |
| 3d9rB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.72 | 40.0 | 5.33e-01 | 90.3% | 97.7% |
| 3soyA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.72 | 41.0 | 5.26e-01 | 89.5% | 93.7% |
| 3hzpA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.72 | 38.0 | 5.12e-01 | 88.2% | 95.3% |
| 1idpA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.71 | 44.0 | 5.54e-01 | 91.2% | 99.3% |
| 3b8lA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.70 | 42.0 | 5.40e-01 | 98.7% | 100.0% |
| 3ebyA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.69 | 43.0 | 5.37e-01 | 95.4% | 98.0% |
| 3gzrB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.68 | 37.0 | 4.84e-01 | 88.7% | 91.5% |
| 3e99A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 42.0 | 5.27e-01 | 92.9% | 100.0% |
| 3q90B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 36.0 | 4.74e-01 | 90.3% | 95.4% |
| 1ar0A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 35.0 | 4.68e-01 | 89.9% | 96.8% |
| 2ckfB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 44.0 | 5.14e-01 | 93.7% | 99.4% |
| 3ejvA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 41.0 | 4.95e-01 | 95.0% | 99.4% |
| 1q42A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 40.0 | 4.83e-01 | 97.1% | 100.0% |
| 1qj8A00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.58 | 35.0 | 4.37e-01 | 93.3% | 94.6% |
| 2rckA01 | 3.15.10.30 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › TULIP domain | 0.53 | 38.0 | 3.97e-01 | 100.0% | 79.8% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4419521 | 243.1.1.108 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2_YvbJ | 0.79 | 45.0 | 6.00e-01 | 88.2% | 99.3% |
| 3293799 | 243.1.1.24 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › ARC6-like_IMS | 0.74 | 42.0 | 5.26e-01 | 88.7% | 88.7% |
| 3840054 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.62 | 33.0 | 4.25e-01 | 92.9% | 87.9% |
| 4084508 | 243.1.1.92 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26366 | 0.61 | 40.0 | 4.85e-01 | 98.7% | 98.7% |
| 3511681 | 883.1.1.27 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › DUF7061 | 0.61 | 41.0 | 4.22e-01 | 100.0% | 70.0% |
| None | — | 0.58 | 35.0 | 4.37e-01 | 93.3% | 94.6% | |
| 145377 | 5084.1.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl | 0.57 | 35.0 | 4.35e-01 | 93.7% | 95.4% |
| 4630069 | 4010.1.1.3 ↗ | a+b complex topology › N-terminal domain in beta subunit of DNA dependent RNA-polymerase › N-terminal domain in beta subunit of DNA dependent RNA-polymerase › N-terminal domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_3 | 0.54 | 36.0 | 3.59e-01 | 99.6% | 62.9% |
| 4138123 | 883.1.1.18 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › PF26545 | 0.54 | 39.0 | 4.15e-01 | 94.1% | 83.3% |
| 3728993 | 883.1.1.18 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › PF26545 | 0.54 | 39.0 | 4.22e-01 | 94.1% | 88.0% |
| 3506244 | 5084.1.1.16 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Ail_Lom | 0.51 | 35.0 | 4.07e-01 | 92.9% | 95.4% |
| 3837948 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.51 | 37.0 | 4.11e-01 | 100.0% | 93.2% |
| 3598868 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.50 | 43.0 | 4.31e-01 | 90.3% | 88.6% |