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SRR1747018_scaffold_0_prodigal-single.1__X__X__00222
Bact-VirSRR1747018_scaffold_0_prodigal-single.1__X__X__00222
Identity
- Kingdom:
- phage
Quality
55.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 193-296
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6j9eJ00 | 3.30.160.560 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.67 | 33.0 | 3.99e-01 | 72.1% | 72.7% |
| 3iq2A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.62 | 39.0 | 3.71e-01 | 73.1% | 53.7% |
| 3hpcX00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.60 | 37.0 | 3.27e-01 | 85.6% | 41.9% |
| 3gzrB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 45.0 | 4.05e-01 | 80.8% | 100.0% |
| 4umwA04 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.58 | 37.0 | 3.55e-01 | 73.1% | 57.8% |
| 3a0oA03 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.56 | 50.0 | 3.70e-01 | 99.0% | 98.6% |
| 1jqpA01 | 2.40.128.80 | Mainly Beta › Beta Barrel › Lipocalin › Cathepsin C, exclusion domain | 0.56 | 38.0 | 3.79e-01 | 80.8% | 65.2% |
| 3lzqA00 | 2.60.40.2480 | Mainly Beta › Sandwich › Immunoglobulin-like › Periplasmic metal-binding protein Tp34-type | 0.55 | 40.0 | 3.51e-01 | 76.0% | 94.3% |
| 1ocsA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.55 | 38.0 | 3.51e-01 | 74.0% | 55.3% |
| 3ly7A01 | 3.40.50.11830 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 44.0 | 3.82e-01 | 86.5% | 93.2% |
| 2ch9A01 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 38.0 | 3.77e-01 | 73.1% | 98.2% |
| 2bolA03 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 30.0 | 3.22e-01 | 80.8% | 61.3% |
| 2vgaA00 | 2.60.240.10 | Mainly Beta › Sandwich › Viral Chemokine Inhibitor; Chain A › Major secreted virus protein | 0.54 | 45.0 | 3.64e-01 | 89.4% | 85.6% |
| 4id2A00 | 2.40.128.510 | Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4738 | 0.52 | 41.0 | 3.76e-01 | 82.7% | 94.1% |
| 4hrvA00 | 3.40.50.10610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component | 0.52 | 39.0 | 3.58e-01 | 80.8% | 59.7% |
| 2hqsA01 | 3.40.50.10070 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TolB, N-terminal domain | 0.52 | 41.0 | 3.73e-01 | 86.5% | 83.8% |
| 2porA00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.51 | 47.0 | 3.33e-01 | 100.0% | 83.1% |
| 3h27A00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.51 | 44.0 | 2.95e-01 | 96.2% | 90.7% |
| 1epaA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 40.0 | 3.45e-01 | 83.7% | 72.5% |
| 4ekjA01 | 2.60.40.1500 | Mainly Beta › Sandwich › Immunoglobulin-like › Glycosyl hydrolase domain; family 39 | 0.50 | 36.0 | 3.15e-01 | 74.0% | 53.2% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3715664 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.67 | 39.0 | 3.60e-01 | 76.0% | 44.6% |
| 4466453 | 63.1.1.5 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › ATG27 | 0.63 | 44.0 | 3.85e-01 | 72.1% | 80.5% |
| 3261797 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.63 | 56.0 | 3.84e-01 | 99.0% | 91.5% |
| 4955671 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.62 | 39.0 | 4.39e-01 | 73.1% | 81.2% |
| 3206632 | 896.1.1.2 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP14 | 0.61 | 39.0 | 4.31e-01 | 74.0% | 78.8% |
| 4527337 | 206.1.2.4 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › Ins_P5_2-kin | 0.61 | 43.0 | 3.15e-01 | 73.1% | 56.0% |
| 3938214 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.60 | 44.0 | 3.93e-01 | 76.0% | 84.1% |
| 5048170 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.60 | 33.0 | 3.76e-01 | 74.0% | 71.2% |
| 3920557 | 4210.1.1.3 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain › PF26166 | 0.60 | 39.0 | 4.08e-01 | 76.0% | 71.6% |
| 5042182 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.60 | 44.0 | 4.48e-01 | 76.0% | 84.0% |
| 3448796 | 4292.2.1.0 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain | 0.58 | 45.0 | 4.13e-01 | 82.7% | 76.3% |
| 3709267 | 5.1.2.33 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BNR_3 | 0.58 | 46.0 | 3.21e-01 | 84.6% | 48.8% |
| 1324287 | 267.1.1.0 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain | 0.58 | 36.0 | 3.50e-01 | 72.1% | 56.4% |
| 3456076 | 5.1.3.159 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF7595 | 0.57 | 49.0 | 3.79e-01 | 94.2% | 77.0% |
| 4969672 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.57 | 46.0 | 3.63e-01 | 87.5% | 91.3% |
| 5038645 | 267.1.1.0 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain | 0.57 | 36.0 | 3.52e-01 | 71.2% | 58.3% |
| 3681890 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.56 | 41.0 | 3.39e-01 | 76.9% | 81.0% |
| 4957801 | 12.3.1.40 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › TREH_N | 0.56 | 47.0 | 3.84e-01 | 94.2% | 92.9% |
| 3537881 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.56 | 42.0 | 3.59e-01 | 77.9% | 90.3% |
| 5007802 | 331.4.1.36 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › PF27851 | 0.56 | 31.0 | 3.50e-01 | 79.8% | 70.0% |
| 3265052 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.56 | 48.0 | 3.66e-01 | 93.3% | 88.1% |
| 5020213 | 267.1.1.0 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain | 0.56 | 35.0 | 3.32e-01 | 70.2% | 53.6% |
| 3437311 | 3459.1.1.3 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › DUF868 | 0.55 | 38.0 | 4.14e-01 | 71.2% | 100.0% |
| 4952587 | 267.1.1.0 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain | 0.54 | 36.0 | 3.40e-01 | 70.2% | 56.8% |
| 3602062 | 210.2.1.0 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain | 0.54 | 46.0 | 4.06e-01 | 92.3% | 78.7% |
| 3734383 | 5.1.11.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed | 0.54 | 47.0 | 3.21e-01 | 96.2% | 82.9% |
| 5030147 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.54 | 40.0 | 3.57e-01 | 77.9% | 56.6% |
| 4031368 | 3264.1.1.0 ↗ | 0.54 | 37.0 | 3.31e-01 | 93.3% | 50.3% | |
| 1693582 | 12.3.1.7 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_52 | 0.53 | 44.0 | 3.33e-01 | 94.2% | 93.7% |
| 3948696 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.53 | 38.0 | 3.41e-01 | 75.0% | 68.7% |
| 4024578 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.53 | 40.0 | 3.52e-01 | 80.8% | 57.4% |
| 3866695 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.52 | 44.0 | 3.88e-01 | 92.3% | 83.2% |
| 3414535 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.51 | 37.0 | 3.16e-01 | 76.0% | 94.6% |
| 3709865 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 46.0 | 3.15e-01 | 100.0% | 95.5% |
| 3518061 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.51 | 39.0 | 3.64e-01 | 80.8% | 80.0% |
| 4221575 | 4099.1.1.52 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › FTA2 | 0.51 | 40.0 | 4.00e-01 | 86.5% | 81.9% |
| 5066518 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.50 | 33.0 | 2.94e-01 | 84.6% | 45.2% |
| 4673646 | 331.3.1.19 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VanA_C | 0.50 | 39.0 | 3.10e-01 | 83.7% | 58.2% |