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SRR1747018_scaffold_0_prodigal-single.1__X__X__00227
Bact-VirSRR1747018_scaffold_0_prodigal-single.1__X__X__00227
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-201_291-311
Domain cluster:
rep: IMGVR_UViG_3300010351_001766-3300010351-Ga0116248_100044545__D2-227_319-384
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02739.23 best | 5_3_exonuc_N | 46.5 | 4.70e-12 | 90.0% | 98.2% |
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xo1A02 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.85 | 60.0 | 7.14e-01 | 98.2% | 100.0% |
| 1cmwA01 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.73 | 50.0 | 6.00e-01 | 85.0% | 100.0% |
| 4ap9A01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.65 | 35.0 | 4.41e-01 | 87.7% | 83.5% |
| 2wteA01 | 3.40.50.11700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 40.0 | 4.93e-01 | 90.0% | 100.0% |
| 8sp0A01 | 3.40.50.10140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain | 0.59 | 29.0 | 3.44e-01 | 90.5% | 64.3% |
| 2hqbA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 33.0 | 4.19e-01 | 89.5% | 93.1% |
| 3idfA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.58 | 37.0 | 4.50e-01 | 81.8% | 100.0% |
| 4uw9A01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.58 | 38.0 | 4.57e-01 | 87.3% | 100.0% |
| 1j2rA00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.58 | 43.0 | 4.67e-01 | 88.6% | 91.0% |
| 3wrwA01 | 3.40.50.12020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Uncharacterised protein family UPF0261, NN domain | 0.57 | 39.0 | 4.20e-01 | 88.6% | 80.5% |
| 3brqB01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 33.0 | 4.24e-01 | 89.5% | 96.2% |
| 3rotA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 34.0 | 4.17e-01 | 81.4% | 93.4% |
| 3pieC01 | 3.40.50.12390 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 52.0 | 4.85e-01 | 98.6% | 80.5% |
| 4y9tA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 35.0 | 3.85e-01 | 80.0% | 77.3% |
| 2kpoA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 28.0 | 3.91e-01 | 80.0% | 100.0% |
| 3l49A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 31.0 | 3.95e-01 | 89.5% | 96.9% |
| 4kq9A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 35.0 | 3.65e-01 | 77.7% | 70.0% |
| 4o5aA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 33.0 | 4.02e-01 | 81.4% | 97.1% |
| 1peaA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 36.0 | 4.04e-01 | 83.2% | 86.9% |
| 2vk2A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 31.0 | 3.93e-01 | 89.5% | 97.7% |
| 4dqlA03 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.52 | 36.0 | 4.13e-01 | 82.7% | 93.8% |
| 4ry8C02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 37.0 | 4.18e-01 | 85.0% | 94.6% |
| 3gybA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 33.0 | 3.99e-01 | 80.9% | 97.8% |
| 3hb0D00 | 3.40.50.12350 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 43.0 | 4.06e-01 | 85.5% | 96.5% |
| 3ctzA02 | 3.40.350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain | 0.52 | 36.0 | 4.11e-01 | 79.5% | 93.3% |
| 3eafA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 36.0 | 4.03e-01 | 83.2% | 88.7% |
| 2qtlA03 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.52 | 36.0 | 4.17e-01 | 82.7% | 99.4% |
| 3abiA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 33.0 | 3.75e-01 | 89.5% | 84.3% |
| 4zyaB00 | 3.30.1910.20 | Alpha Beta › 2-Layer Sandwich › so0334 like fold › asparaginyl-tRNA synthetase, N-terminal domain | 0.50 | 17.0 | 2.73e-01 | 88.2% | 78.9% |
| 2bpoA04 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.50 | 35.0 | 3.99e-01 | 82.7% | 95.1% |
| 2r3bA01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.50 | 33.0 | 3.07e-01 | 90.5% | 50.9% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3261281 | 2006.1.4.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › 5_3_exonuc_N | 0.88 | 65.0 | 7.50e-01 | 90.5% | 98.2% |
| 3969358 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.87 | 63.0 | 7.37e-01 | 88.6% | 100.0% |
| 4324598 | 2006.1.4.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › 5_3_exonuc_N | 0.86 | 67.0 | 7.31e-01 | 100.0% | 94.1% |
| 3942272 | 2006.1.4.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › 5_3_exonuc_N | 0.86 | 65.0 | 7.43e-01 | 90.0% | 100.0% |
| 4029535 | 2006.1.4.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › 5_3_exonuc_N | 0.86 | 68.0 | 7.54e-01 | 90.5% | 98.9% |
| 4031817 | 2006.1.4.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › 5_3_exonuc_N | 0.86 | 64.0 | 7.32e-01 | 90.5% | 98.8% |
| 4995752 | 2006.1.4.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › 5_3_exonuc_N | 0.86 | 63.0 | 7.26e-01 | 89.5% | 99.4% |
| 3387660 | 2006.1.4.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › 5_3_exonuc_N | 0.85 | 63.0 | 7.17e-01 | 90.5% | 97.6% |
| 4040391 | 2006.1.4.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › 5_3_exonuc_N | 0.85 | 67.0 | 7.44e-01 | 90.0% | 98.9% |
| 4238071 | 2006.1.4.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › 5_3_exonuc_N | 0.84 | 65.0 | 7.29e-01 | 90.0% | 99.4% |
| 3283240 | 2006.1.4.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › 5_3_exonuc_N | 0.83 | 67.0 | 7.17e-01 | 90.5% | 93.8% |
| 3293941 | 2006.1.4.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › 5_3_exonuc_N | 0.78 | 69.0 | 7.13e-01 | 98.2% | 96.2% |
| 3831671 | 2006.1.4.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › 5_3_exonuc_N | 0.77 | 66.0 | 7.00e-01 | 90.5% | 99.0% |
| 5057690 | 7592.1.1.3 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › DUF6293_N | 0.69 | 39.0 | 4.98e-01 | 87.3% | 93.8% |
| 3267380 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.67 | 57.0 | 5.69e-01 | 98.2% | 86.7% |
| 4264908 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.66 | 53.0 | 5.38e-01 | 90.5% | 84.7% |
| 5013785 | 2006.1.4.10 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_4 | 0.64 | 39.0 | 3.94e-01 | 84.1% | 58.2% |
| 4933316 | 2006.1.4.25 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_I | 0.63 | 55.0 | 5.46e-01 | 90.5% | 88.9% |
| 3731036 | 2006.1.4.20 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_I_2 | 0.63 | 58.0 | 5.27e-01 | 97.3% | 82.1% |
| 4956546 | 2006.1.4.25 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_I | 0.63 | 53.0 | 5.40e-01 | 90.5% | 90.2% |
| 3607366 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.62 | 57.0 | 5.10e-01 | 97.3% | 81.7% |
| 4955705 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.61 | 37.0 | 4.70e-01 | 84.5% | 100.0% |
| 5071580 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.60 | 41.0 | 4.68e-01 | 84.1% | 89.4% |
| 4948480 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.59 | 38.0 | 4.65e-01 | 83.2% | 99.3% |
| 3953004 | 2003.1.1.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N | 0.59 | 32.0 | 4.08e-01 | 89.5% | 88.5% |
| 3639445 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.58 | 40.0 | 3.79e-01 | 82.7% | 59.2% |
| 135916 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.58 | 37.0 | 4.50e-01 | 81.8% | 100.0% |
| 3829765 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.57 | 40.0 | 4.68e-01 | 87.3% | 98.8% |
| 3477369 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.57 | 39.0 | 4.50e-01 | 84.1% | 94.4% |
| 3826103 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.57 | 38.0 | 4.58e-01 | 83.2% | 100.0% |
| 3680025 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.56 | 41.0 | 4.60e-01 | 89.5% | 97.1% |
| 3270756 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.56 | 37.0 | 4.35e-01 | 83.2% | 94.8% |
| 3478669 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.56 | 38.0 | 4.50e-01 | 84.1% | 98.7% |
| 3473301 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.55 | 37.0 | 4.47e-01 | 82.3% | 100.0% |
| 3379312 | 2005.1.1.41 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_C | 0.55 | 40.0 | 4.18e-01 | 82.7% | 80.0% |
| 3470605 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.55 | 37.0 | 4.40e-01 | 82.3% | 98.7% |
| 3193950 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.55 | 40.0 | 4.59e-01 | 82.7% | 100.0% |
| 3511076 | 2005.1.1.36 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 | 0.54 | 36.0 | 4.27e-01 | 84.1% | 98.6% |
| 3480622 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.54 | 37.0 | 4.22e-01 | 84.1% | 90.5% |
| 3989133 | 2010.1.1.3 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › EIIA-man | 0.54 | 32.0 | 3.96e-01 | 94.1% | 90.3% |
| 3839224 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.54 | 33.0 | 4.13e-01 | 80.9% | 99.3% |
| 4652309 | 2004.1.1.105 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinase-PPPase | 0.54 | 31.0 | 3.71e-01 | 99.5% | 84.1% |
| 4966224 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.53 | 43.0 | 4.57e-01 | 85.9% | 98.5% |
| 3471159 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.53 | 36.0 | 4.08e-01 | 84.5% | 91.5% |
| 3826567 | 7598.1.1.1 ↗ | a/b three-layered sandwiches › Resistance protein Tm-1 first domain › Resistance protein Tm-1 first domain › Resistance protein Tm-1 first domain › UPF0261 | 0.52 | 38.0 | 3.92e-01 | 89.5% | 78.1% |
| 3809256 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.52 | 39.0 | 4.40e-01 | 84.1% | 100.0% |
| 3589423 | 2007.1.2.10 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_3 | 0.52 | 34.0 | 4.04e-01 | 79.5% | 99.3% |
| 3645022 | 2005.1.1.43 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_2nd | 0.52 | 37.0 | 4.16e-01 | 82.7% | 96.4% |
| 3954644 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.51 | 35.0 | 4.17e-01 | 82.7% | 99.4% |
| 3360390 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.50 | 37.0 | 4.12e-01 | 84.1% | 96.5% |
| 3681578 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.50 | 30.0 | 3.60e-01 | 100.0% | 90.0% |
D2
high
residues 204-287
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3zdbA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.76 | 60.0 | 5.97e-01 | 100.0% | 79.8% |
| 5hmlA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.74 | 59.0 | 6.03e-01 | 100.0% | 90.0% |
| 1mw9X02 | 1.10.460.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 | 0.65 | 42.0 | 3.37e-01 | 100.0% | 33.1% |
| 3h7iA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.65 | 54.0 | 5.64e-01 | 100.0% | 97.4% |
| 2pkeA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.60 | 51.0 | 5.28e-01 | 92.9% | 100.0% |
| 1ma1A01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.60 | 36.0 | 3.97e-01 | 85.7% | 76.6% |
| 2hroA02 | 1.10.274.10 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › PtsI, HPr-binding domain | 0.59 | 50.0 | 4.46e-01 | 100.0% | 81.2% |
| 6ynwH01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.58 | 36.0 | 3.84e-01 | 100.0% | 70.3% |
| 4o6yB00 | 1.20.120.1770 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.58 | 45.0 | 3.43e-01 | 85.7% | 95.3% |
| 2x2vA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.57 | 36.0 | 3.84e-01 | 100.0% | 77.9% |
| 4ci1B03 | 1.20.58.1480 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 37.0 | 4.01e-01 | 88.1% | 85.5% |
| 1vw4L02 | 1.10.246.170 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.55 | 46.0 | 4.67e-01 | 92.9% | 90.6% |
| 3u3iA02 | 1.20.58.1110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 41.0 | 3.84e-01 | 84.5% | 88.9% |
| 1a7mA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.53 | 39.0 | 3.13e-01 | 79.8% | 81.1% |
| 2wgmA01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.52 | 33.0 | 3.37e-01 | 100.0% | 64.6% |
| 2ehwA00 | 6.10.140.1220 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 42.0 | 3.87e-01 | 91.7% | 74.8% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.77 | 63.0 | 6.14e-01 | 100.0% | 80.0% | |
| 4030950 | 102.1.1.4 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc | 0.77 | 61.0 | 5.48e-01 | 100.0% | 61.7% |
| 4364220 | 102.1.1.4 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc | 0.75 | 62.0 | 5.42e-01 | 100.0% | 61.7% |
| 4962283 | 604.4.1.0 ↗ | alpha bundles › Spectrin repeat-like › Alpha-hemoglobin stabilizing protein AHSP › Alpha-hemoglobin stabilizing protein AHSP | 0.74 | 54.0 | 5.50e-01 | 76.2% | 87.5% |
| 5019263 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.69 | 59.0 | 5.62e-01 | 95.2% | 99.0% |
| 3231673 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.67 | 36.0 | 3.86e-01 | 78.6% | 58.7% |
| 3925673 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 43.0 | 4.58e-01 | 78.6% | 100.0% |
| 4927066 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.57 | 43.0 | 3.78e-01 | 82.1% | 73.8% |
| 3192783 | 633.1.1.5 ↗ | alpha bundles › Bromodomain-like › Bromodomain › Bromodomain › DUF7877 | 0.54 | 46.0 | 4.44e-01 | 97.6% | 99.0% |
| 4947815 | 6155.1.1.0 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter | 0.54 | 37.0 | 3.58e-01 | 76.2% | 61.0% |
| 4934147 | 604.39.1.3 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › ECF-ribofla_trS | 0.53 | 45.0 | 3.68e-01 | 100.0% | 84.0% |
| 3722072 | 3924.1.1.1 ↗ | alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Fungal_trans_2 | 0.51 | 39.0 | 3.03e-01 | 83.3% | 41.5% |