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SRR1747018_scaffold_0_prodigal-single.1__X__X__00234
Bact-VirSRR1747018_scaffold_0_prodigal-single.1__X__X__00234
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 35-189
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10502.15 best | Peptidase_S26 | 54.7 | 1.60e-14 | 94.8% | 81.0% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1b12C01 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.86 | 57.0 | 6.53e-01 | 100.0% | 86.8% |
| 1jheA00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.81 | 45.0 | 5.09e-01 | 96.8% | 70.2% |
| 1f39A00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.80 | 48.0 | 6.00e-01 | 98.7% | 93.1% |
| 4k8wA00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.80 | 57.0 | 6.44e-01 | 85.8% | 94.9% |
| 4me8A00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.70 | 51.0 | 5.90e-01 | 79.4% | 100.0% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 31.0 | 4.50e-01 | 76.1% | 91.7% |
| 7oc3A01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 34.0 | 4.20e-01 | 90.3% | 96.7% |
| 2i4lA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.51 | 37.0 | 2.93e-01 | 76.1% | 84.4% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3266698 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.93 | 66.0 | 7.07e-01 | 98.7% | 82.2% |
| 4943011 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.92 | 54.0 | 7.01e-01 | 98.1% | 96.8% |
| 4958339 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.88 | 51.0 | 6.05e-01 | 97.4% | 81.8% |
| 4929875 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.87 | 49.0 | 6.10e-01 | 97.4% | 87.0% |
| 3481729 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.87 | 65.0 | 7.44e-01 | 98.1% | 99.2% |
| 4028922 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.87 | 63.0 | 6.78e-01 | 98.1% | 85.2% |
| 1323508 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.87 | 72.0 | 7.64e-01 | 100.0% | 96.4% |
| 4007999 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.86 | 49.0 | 5.33e-01 | 98.7% | 65.9% |
| 4646593 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.86 | 50.0 | 5.37e-01 | 98.7% | 66.7% |
| 5038570 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.86 | 52.0 | 5.89e-01 | 96.1% | 78.3% |
| 3354459 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.84 | 61.0 | 7.11e-01 | 80.6% | 100.0% |
| 5010546 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.83 | 53.0 | 6.35e-01 | 96.8% | 91.8% |
| 3715285 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.82 | 52.0 | 5.22e-01 | 96.8% | 63.2% |
| 4300895 | 4.11.1.6 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › PF31032 | 0.82 | 52.0 | 5.52e-01 | 96.8% | 71.4% |
| 3615426 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.81 | 52.0 | 5.35e-01 | 96.8% | 66.7% |
| 3967548 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.81 | 71.0 | 6.83e-01 | 99.4% | 81.6% |
| 4987744 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.81 | 52.0 | 5.61e-01 | 98.7% | 74.8% |
| 3784253 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.81 | 67.0 | 6.59e-01 | 98.7% | 80.6% |
| 3838360 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.80 | 76.0 | 6.14e-01 | 100.0% | 88.1% |
| 3414063 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.80 | 29.0 | 5.13e-01 | 75.5% | 100.0% |
| 3549321 | 4.11.1.5 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24, PF31032 | 0.79 | 52.0 | 5.19e-01 | 98.1% | 64.4% |
| 3689234 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.79 | 69.0 | 6.63e-01 | 98.1% | 81.8% |
| 3974126 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.79 | 75.0 | 6.74e-01 | 100.0% | 96.6% |
| 5037456 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.79 | 70.0 | 7.25e-01 | 94.8% | 98.6% |
| 5035321 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.78 | 69.0 | 7.00e-01 | 96.8% | 92.3% |
| 3933131 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.78 | 57.0 | 6.54e-01 | 92.3% | 96.7% |
| 4956630 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.78 | 51.0 | 5.17e-01 | 98.7% | 66.5% |
| 3963855 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.78 | 74.0 | 6.35e-01 | 100.0% | 95.2% |
| 5029433 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.78 | 54.0 | 5.41e-01 | 98.7% | 68.8% |
| 4544733 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.77 | 73.0 | 6.71e-01 | 98.1% | 89.5% |
| 4644245 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.77 | 73.0 | 6.12e-01 | 100.0% | 90.8% |
| 4214117 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.77 | 73.0 | 6.46e-01 | 99.4% | 93.3% |
| 4303959 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.76 | 65.0 | 6.60e-01 | 92.9% | 89.7% |
| 3989651 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.76 | 71.0 | 6.41e-01 | 98.1% | 85.4% |
| 4255495 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.75 | 71.0 | 5.94e-01 | 100.0% | 86.8% |
| None | — | 0.74 | 70.0 | 6.75e-01 | 98.1% | 92.9% | |
| 4182690 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.74 | 67.0 | 6.52e-01 | 99.4% | 86.5% |
| 4229196 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.73 | 66.0 | 6.57e-01 | 94.8% | 91.3% |
| 3550699 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.71 | 33.0 | 4.17e-01 | 78.1% | 72.6% |
| 3841414 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.69 | 32.0 | 4.77e-01 | 96.1% | 100.0% |
| 3954254 | 4.1.1.387 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Rv0428c | 0.68 | 30.0 | 4.47e-01 | 80.0% | 98.5% |
| 5055699 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.63 | 59.0 | 5.17e-01 | 96.8% | 82.3% |
| 5027789 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.61 | 32.0 | 4.03e-01 | 77.4% | 82.0% |
| 4949773 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.58 | 48.0 | 5.00e-01 | 100.0% | 93.1% |
| 3236163 | 1.1.7.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 | 0.53 | 28.0 | 3.33e-01 | 78.7% | 73.3% |
| 3459099 | 4.1.1.158 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3444 | 0.52 | 33.0 | 3.94e-01 | 80.6% | 93.3% |