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SRR1747018_scaffold_0_prodigal-single.1__X__X__00299

Bact-Vir

SRR1747018_scaffold_0_prodigal-single.1__X__X__00299

Identity

Kingdom:
phage

Quality

57.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 178-393
PDB
Domain cluster: representative
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ghaA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.81 64.0 6.90e-01 83.8% 94.1%
1z6mA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.81 38.0 5.35e-01 83.3% 87.7%
4z7xB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.81 69.0 7.12e-01 97.7% 92.3%
4gxzD00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.80 60.0 6.69e-01 84.7% 96.5%
5c00D00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.79 64.0 6.82e-01 99.1% 94.2%
3gykB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.79 59.0 6.59e-01 84.7% 96.0%
4ihuA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.78 64.0 6.66e-01 86.6% 91.0%
4ml1A02 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.78 47.0 6.02e-01 81.5% 100.0%
3bciA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.77 58.0 6.55e-01 76.4% 100.0%
1v57A03 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.75 50.0 6.06e-01 82.4% 100.0%
3gn3A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.74 60.0 6.53e-01 86.1% 100.0%
3gl5A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.73 54.0 5.54e-01 75.9% 99.1%
4n30A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.73 57.0 6.22e-01 86.1% 95.6%
3apqA02 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.73 36.0 4.89e-01 100.0% 88.8%
3wgxB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.72 36.0 5.03e-01 100.0% 94.6%
3feuA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.72 53.0 5.69e-01 83.8% 88.5%
4jrrB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.71 54.0 5.78e-01 84.3% 91.3%
3kzqA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.71 53.0 5.43e-01 76.4% 97.1%
4nwyA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.70 36.0 4.69e-01 100.0% 85.2%
3emxA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.70 36.0 4.78e-01 100.0% 88.7%
2remB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.70 52.0 5.61e-01 83.3% 89.3%
3h79A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.69 36.0 4.95e-01 100.0% 95.7%
4p3yB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.69 51.0 5.51e-01 83.8% 89.0%
5vyoD00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.69 52.0 5.58e-01 83.3% 88.8%
4nxiA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.69 52.0 5.46e-01 76.4% 88.1%
3l9vC00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.69 52.0 5.65e-01 84.3% 92.3%
3q18A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.69 30.0 3.98e-01 92.1% 73.3%
1bedA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.69 51.0 5.50e-01 82.9% 90.1%
3hd5B01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.68 46.0 5.17e-01 70.4% 89.0%
3gl3D00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.67 40.0 4.93e-01 97.7% 92.7%
3fkfD00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.66 40.0 4.93e-01 97.2% 93.4%
2npbA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.66 26.0 4.04e-01 76.4% 88.6%
3ewlB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.65 39.0 4.79e-01 97.2% 92.0%
2znmD00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.65 48.0 5.13e-01 82.9% 88.0%
3razA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.65 40.0 4.93e-01 97.7% 96.3%
1jfuA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.65 40.0 4.44e-01 98.1% 75.0%
7p8na01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.64 28.0 4.21e-01 80.1% 100.0%
2lnsA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.62 34.0 4.21e-01 100.0% 82.9%
1ewxA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.61 40.0 4.84e-01 85.2% 97.9%
4tr3A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.61 42.0 4.51e-01 97.7% 80.3%
3drnB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.60 37.0 4.42e-01 97.2% 89.3%
3gkmA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 39.0 4.47e-01 84.3% 92.4%
1gp1A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.54 42.0 4.55e-01 98.1% 95.1%
1xccD01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 35.0 4.12e-01 92.6% 94.6%
2x49A01 3.40.30.60 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 0.53 25.0 3.50e-01 77.8% 94.8%
4ycsA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 29.0 3.84e-01 76.4% 97.6%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4352824 2485.1.1.41 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_4 0.81 60.0 6.51e-01 86.1% 88.6%
3283535 2485.1.1.41 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_4 0.81 66.0 7.15e-01 99.5% 98.4%
3946919 2485.1.1.41 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_4 0.81 60.0 6.74e-01 84.3% 95.9%
5029038 2485.1.1.41 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_4 0.81 60.0 6.68e-01 83.8% 94.3%
1066851 2485.1.1.10 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › DSBA 0.80 59.0 6.54e-01 84.3% 91.6%
3287833 2485.1.1.41 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_4 0.80 68.0 6.86e-01 95.8% 88.8%
4247965 2485.1.1.41 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_4 0.79 63.0 6.46e-01 84.3% 85.4%
3590995 2485.1.1.41 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_4 0.79 58.0 6.50e-01 82.4% 94.1%
3959054 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.79 62.0 6.56e-01 80.6% 91.3%
4095642 2485.1.1.41 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_4 0.79 59.0 6.15e-01 86.1% 82.5%
2833007 2485.1.1.10 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › DSBA 0.79 58.0 6.36e-01 83.8% 90.5%
3955826 2485.1.1.41 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_4 0.78 65.0 6.90e-01 99.5% 95.4%
4106490 2485.1.1.41 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_4 0.78 60.0 6.39e-01 83.8% 88.1%
2472947 2485.1.1.41 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_4 0.78 60.0 6.36e-01 84.3% 88.4%
4937134 2485.1.1.41 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_4 0.78 61.0 6.70e-01 83.8% 98.3%
3951801 2485.1.1.41 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_4 0.78 64.0 6.33e-01 84.7% 83.1%
3385747 2485.1.1.37 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_2 0.77 45.0 5.25e-01 72.2% 79.4%
4927708 2485.1.1.41 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_4 0.77 63.0 6.67e-01 84.7% 93.8%
4075573 2485.1.1.41 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_4 0.77 57.0 6.19e-01 86.1% 89.2%
5076938 2485.1.1.38 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_3 0.76 33.0 4.97e-01 75.9% 92.6%
1126156 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.76 48.0 5.69e-01 83.8% 88.9%
4031450 2485.1.1.41 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_4 0.76 59.0 6.48e-01 82.9% 98.3%
3804780 2485.1.1.41 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_4 0.76 65.0 6.62e-01 95.8% 91.9%
3948271 2485.1.1.41 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_4 0.75 61.0 6.33e-01 100.0% 90.5%
3324633 2485.1.1.52 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_15 0.75 61.0 5.64e-01 84.7% 74.8%
3286486 2485.1.1.41 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_4 0.75 64.0 6.67e-01 100.0% 96.0%
3230223 2485.1.1.67 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GILT 0.75 56.0 5.93e-01 76.9% 91.8%
11323 2485.1.1.37 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_2 0.74 51.0 5.73e-01 84.3% 88.2%
3942472 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.74 58.0 6.45e-01 99.1% 100.0%
3192524 2485.1.1.67 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GILT 0.73 55.0 5.91e-01 77.8% 97.4%
4991243 2485.1.1.41 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_4 0.73 53.0 5.16e-01 74.1% 76.6%
3934759 3009.1.1.0 ↗ alpha arrays › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like 0.72 54.0 5.39e-01 76.9% 98.2%
3291887 2485.1.1.67 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GILT 0.72 55.0 5.79e-01 77.3% 89.1%
4958584 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.72 33.0 4.36e-01 76.4% 76.0%
4940401 2485.1.1.67 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GILT 0.72 53.0 5.76e-01 76.9% 90.0%
3793930 2485.1.1.1 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.72 37.0 4.85e-01 100.0% 86.4%
3723468 2485.1.1.51 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_14 0.71 59.0 5.67e-01 85.6% 85.8%
4413254 2485.1.1.10 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › DSBA 0.71 55.0 5.83e-01 83.8% 89.9%
3631141 2485.1.1.51 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_14 0.71 58.0 5.63e-01 85.6% 85.4%
3438758 3009.1.1.1 ↗ alpha arrays › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › DSBA 0.71 53.0 5.32e-01 77.8% 92.0%
3930336 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.70 37.0 4.73e-01 100.0% 84.6%
4026233 2485.1.1.1 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.70 37.0 5.03e-01 100.0% 96.5%
3250280 2485.1.1.1 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.70 37.0 4.87e-01 100.0% 89.6%
5036845 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.70 31.0 4.60e-01 77.8% 94.7%
4803600 2485.1.1.51 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_14 0.70 57.0 5.45e-01 85.6% 81.9%
4128178 2485.1.1.10 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › DSBA 0.69 51.0 5.54e-01 83.8% 89.7%
4932587 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.69 51.0 5.37e-01 76.9% 83.6%
3963852 2485.1.1.41 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_4 0.67 50.0 5.43e-01 82.9% 89.7%
5054048 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.67 50.0 5.24e-01 76.9% 83.5%
3557132 2485.1.1.8 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Calsequestrin 0.67 37.0 4.69e-01 100.0% 88.1%
3443703 2485.1.1.23 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › DUF1223 0.65 35.0 4.47e-01 76.4% 86.9%
3788788 2485.1.1.51 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_14 0.64 54.0 5.18e-01 98.6% 77.6%
3174824 2485.1.1.51 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_14 0.64 52.0 5.21e-01 84.7% 82.7%
5069446 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.64 34.0 3.74e-01 83.8% 62.9%
3706315 2485.1.1.2 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GSHPx 0.63 42.0 4.82e-01 97.7% 89.4%
3700233 2485.1.1.45 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_8 0.58 42.0 4.69e-01 84.7% 94.1%