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SRR1747018_scaffold_15_prodigal-single.1__X__X__00011
Bact-VirSRR1747018_scaffold_15_prodigal-single.1__X__X__00011
Identity
- Kingdom:
- phage
Quality
91.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-122
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hzmG01 | 3.30.310.180 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.73 | 36.0 | 3.66e-01 | 93.2% | 47.8% |
| 2qlvB02 | 2.20.25.290 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.69 | 24.0 | 3.96e-01 | 97.5% | 94.7% |
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 36.0 | 4.43e-01 | 99.2% | 90.1% |
| 5w0kA01 | 3.90.380.20 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Herpesvirus glycoprotein H, domain D-II | 0.63 | 36.0 | 2.63e-01 | 82.2% | 20.3% |
| 2aq5A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.62 | 42.0 | 3.07e-01 | 99.2% | 24.1% |
| 2kieA00 | 2.30.29.110 | Mainly Beta › Roll › PH-domain like › | 0.61 | 33.0 | 3.28e-01 | 84.7% | 49.2% |
| 1ntyA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 35.0 | 3.45e-01 | 88.1% | 54.8% |
| 5hy7B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 48.0 | 3.24e-01 | 100.0% | 24.5% |
| 5ep0A03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.57 | 31.0 | 4.03e-01 | 96.6% | 91.4% |
| 1xn5A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 40.0 | 3.79e-01 | 96.6% | 60.9% |
| 1t0pB00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 29.0 | 3.27e-01 | 99.2% | 62.8% |
| 2w4yA00 | 2.40.160.220 | Mainly Beta › Beta Barrel › Porin › | 0.56 | 34.0 | 3.36e-01 | 94.1% | 57.4% |
| 2nn5A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 38.0 | 3.39e-01 | 96.6% | 49.1% |
| 3tp4B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 30.0 | 3.35e-01 | 99.2% | 65.6% |
| 1zxqA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 28.0 | 3.16e-01 | 99.2% | 63.5% |
| 3a9gA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.53 | 39.0 | 2.87e-01 | 98.3% | 26.9% |
| 3q6aB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 37.0 | 3.62e-01 | 96.6% | 63.4% |
| 5mu3B00 | 3.40.50.12050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 35.0 | 3.21e-01 | 90.7% | 50.3% |
| 3fn9C04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 26.0 | 2.94e-01 | 96.6% | 60.9% |
| 1r6bX05 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.50 | 37.0 | 3.91e-01 | 76.3% | 93.9% |
| 3zxjA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.50 | 44.0 | 3.28e-01 | 99.2% | 36.9% |
| 3htyA00 | 2.40.128.280 | Mainly Beta › Beta Barrel › Lipocalin › | 0.50 | 27.0 | 2.94e-01 | 96.6% | 59.6% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3995797 | 220.1.1.160 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_MADD | 0.80 | 30.0 | 4.09e-01 | 81.4% | 64.6% |
| 4643202 | 2008.1.1.181 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_HaeIII | 0.79 | 72.0 | 5.25e-01 | 98.3% | 76.4% |
| 3266298 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.72 | 39.0 | 3.77e-01 | 85.6% | 47.0% |
| 3546354 | 5.1.4.164 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_VPS8 | 0.68 | 51.0 | 3.48e-01 | 100.0% | 23.3% |
| 5014277 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.67 | 38.0 | 4.39e-01 | 96.6% | 76.5% |
| 3410497 | 5.1.4.164 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_VPS8 | 0.65 | 50.0 | 3.38e-01 | 100.0% | 22.6% |
| None | — | 0.65 | 45.0 | 3.30e-01 | 100.0% | 25.8% | |
| 3901826 | 5.1.4.78 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › TFIIIC_delta | 0.64 | 51.0 | 3.24e-01 | 100.0% | 18.0% |
| 3493765 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.64 | 42.0 | 2.87e-01 | 99.2% | 17.9% |
| 3549354 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.64 | 51.0 | 3.21e-01 | 100.0% | 17.5% |
| 3281494 | 5.1.3.183 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FG-GAP, FG-GAP_3 | 0.64 | 44.0 | 3.15e-01 | 100.0% | 24.1% |
| 3780198 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.63 | 45.0 | 2.73e-01 | 98.3% | 11.4% |
| None | — | 0.62 | 49.0 | 3.21e-01 | 100.0% | 19.8% | |
| 3747619 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.62 | 41.0 | 2.94e-01 | 98.3% | 21.6% |
| 3961706 | 4.1.1.161 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4178 | 0.62 | 34.0 | 4.42e-01 | 93.2% | 96.9% |
| 3579842 | 5.1.4.47 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PHTB1_N | 0.62 | 45.0 | 3.20e-01 | 100.0% | 24.3% |
| 4627488 | 5.1.4.156 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Ge1_WD40 | 0.60 | 44.0 | 3.04e-01 | 100.0% | 22.2% |
| 4466482 | 5.1.4.302 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_EML | 0.60 | 40.0 | 2.86e-01 | 98.3% | 22.3% |
| 5015778 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.60 | 46.0 | 3.56e-01 | 98.3% | 36.6% |
| 3369943 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.59 | 39.0 | 4.27e-01 | 95.8% | 80.0% |
| 3785014 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 39.0 | 3.51e-01 | 85.6% | 47.9% |
| 3445964 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.58 | 45.0 | 3.51e-01 | 100.0% | 37.0% |
| 4567929 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.57 | 46.0 | 3.23e-01 | 100.0% | 27.3% |
| None | — | 0.57 | 45.0 | 2.75e-01 | 83.9% | 51.7% | |
| 3423257 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.57 | 42.0 | 3.03e-01 | 97.5% | 25.8% |
| 3990350 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.56 | 41.0 | 3.03e-01 | 98.3% | 28.6% |
| 3708148 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.56 | 41.0 | 2.83e-01 | 88.1% | 21.4% |
| 3392825 | 59.1.3.0 ↗ | beta complex topology › triple barrel › triple barrel › RNA polymerase I subunits A49/A34.5 dimerization domains | 0.56 | 39.0 | 4.19e-01 | 100.0% | 85.0% |
| 3212893 | 5.1.3.57 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › IKI3 | 0.56 | 43.0 | 3.07e-01 | 82.2% | 41.4% |
| 3699578 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 49.0 | 3.31e-01 | 100.0% | 39.6% |
| 3875356 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.55 | 30.0 | 2.90e-01 | 83.1% | 44.3% |
| 3465992 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.54 | 40.0 | 2.93e-01 | 80.5% | 28.2% |
| 3710514 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 41.0 | 3.17e-01 | 88.1% | 36.5% |
| 4027391 | 10.1.1.114 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › PF29973 | 0.53 | 36.0 | 3.82e-01 | 75.4% | 79.0% |
| None | — | 0.52 | 47.0 | 3.31e-01 | 97.5% | 37.7% | |
| 3713007 | 5.1.4.164 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_VPS8 | 0.52 | 47.0 | 3.24e-01 | 100.0% | 62.7% |
| 3198165 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.52 | 48.0 | 3.42e-01 | 100.0% | 41.5% |
| 3628210 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.52 | 29.0 | 3.29e-01 | 97.5% | 72.9% |
| 3601982 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 44.0 | 3.14e-01 | 98.3% | 29.1% |
| 3491452 | 5.1.4.47 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PHTB1_N | 0.52 | 46.0 | 3.15e-01 | 100.0% | 28.5% |
| 3478270 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.52 | 45.0 | 2.99e-01 | 97.5% | 31.3% |
| 3262894 | 59.1.3.1 ↗ | beta complex topology › triple barrel › triple barrel › RNA polymerase I subunits A49/A34.5 dimerization domains › RNA_pol_I_A49 | 0.51 | 38.0 | 3.97e-01 | 100.0% | 86.7% |
| 3421682 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.51 | 45.0 | 3.27e-01 | 100.0% | 34.3% |
| 3271752 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 26.0 | 3.00e-01 | 99.2% | 63.5% |
| 4015704 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.50 | 38.0 | 4.13e-01 | 98.3% | 98.9% |
| 3740272 | 5.1.4.32 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N | 0.50 | 46.0 | 3.12e-01 | 100.0% | 38.1% |