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SRR1747018_scaffold_15_prodigal-single.1__X__X__00030
Bact-VirSRR1747018_scaffold_15_prodigal-single.1__X__X__00030
Identity
- Kingdom:
- phage
Quality
89.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-81
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gzaA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.66 | 49.0 | 4.36e-01 | 76.9% | 93.5% |
| 2fb5A02 | 3.40.1700.10 | Alpha Beta › 3-Layer(aba) Sandwich › YojJ-like (1 › DNA integrity scanning protein, DisA, N-terminal domain | 0.66 | 43.0 | 3.57e-01 | 78.2% | 38.6% |
| 1lbvA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.61 | 46.0 | 3.86e-01 | 82.1% | 98.6% |
| 1ospO01 | 2.40.128.160 | Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) | 0.60 | 55.0 | 4.95e-01 | 100.0% | 89.5% |
| 4a0tA01 | 6.20.80.10 | Special › Other non-globular › Glycosyl hydrolase fold › | 0.60 | 43.0 | 4.73e-01 | 78.2% | 95.1% |
| 3fyfA00 | 2.40.128.410 | Mainly Beta › Beta Barrel › Lipocalin › | 0.60 | 50.0 | 4.08e-01 | 92.3% | 72.5% |
| 4m00A01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 41.0 | 2.90e-01 | 71.8% | 81.1% |
| 1mdaH00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 45.0 | 2.86e-01 | 79.5% | 89.7% |
| 4g6tA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.59 | 44.0 | 3.73e-01 | 78.2% | 88.3% |
| 1mdcA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 50.0 | 4.19e-01 | 92.3% | 94.7% |
| 2cy9B00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.59 | 43.0 | 3.62e-01 | 76.9% | 56.8% |
| 3r7wB02 | 3.30.450.190 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.58 | 47.0 | 4.21e-01 | 93.6% | 78.8% |
| 2r55A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 51.0 | 3.77e-01 | 100.0% | 54.3% |
| 5chtB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.57 | 49.0 | 3.39e-01 | 100.0% | 86.0% |
| 1lf6A01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.56 | 47.0 | 3.37e-01 | 100.0% | 66.3% |
| 3hj4A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.56 | 42.0 | 3.59e-01 | 82.1% | 81.7% |
| 1o8vA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 47.0 | 3.94e-01 | 92.3% | 92.5% |
| 4qa8A00 | 2.50.20.20 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.55 | 46.0 | 3.43e-01 | 93.6% | 89.5% |
| 1u7bA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.55 | 39.0 | 2.78e-01 | 75.6% | 43.0% |
| 1ul7A00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.54 | 45.0 | 4.17e-01 | 93.6% | 76.5% |
| 6eufA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.54 | 45.0 | 3.16e-01 | 98.7% | 92.5% |
| 1ekgA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.53 | 45.0 | 3.97e-01 | 96.2% | 92.4% |
| 3l2hA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 39.0 | 3.18e-01 | 78.2% | 62.6% |
| 3qszA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 44.0 | 3.42e-01 | 93.6% | 67.8% |
| 3p0lD00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 44.0 | 3.42e-01 | 96.2% | 65.9% |
| 4i8oA02 | 3.30.160.690 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain | 0.52 | 41.0 | 4.04e-01 | 97.4% | 80.0% |
| 4hs5A00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.51 | 41.0 | 3.85e-01 | 93.6% | 88.6% |
| 3kxyJ00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.51 | 43.0 | 3.76e-01 | 100.0% | 87.6% |
| 1ohfA03 | 2.60.270.70 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › | 0.50 | 41.0 | 3.53e-01 | 97.4% | 85.8% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4010689 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.70 | 54.0 | 5.00e-01 | 83.3% | 97.0% |
| 4221174 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.69 | 52.0 | 4.91e-01 | 80.8% | 86.3% |
| 3722321 | 241.6.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Arp2/3 complex subunits › Arp2/3 complex subunits › P34-Arc | 0.68 | 49.0 | 4.20e-01 | 75.6% | 73.3% |
| 5049089 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.64 | 52.0 | 4.54e-01 | 89.7% | 68.3% |
| 3599618 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.62 | 43.0 | 3.08e-01 | 73.1% | 25.9% |
| 356532 | 77.1.1.1 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Lipoprotein_1 | 0.61 | 56.0 | 3.98e-01 | 100.0% | 42.2% |
| 4195832 | 9.1.1.24 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_7 | 0.61 | 51.0 | 4.28e-01 | 91.0% | 94.6% |
| 3605755 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.60 | 45.0 | 2.84e-01 | 78.2% | 32.4% |
| 3415592 | 241.15.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N | 0.59 | 50.0 | 4.19e-01 | 100.0% | 86.0% |
| 3442715 | 5.1.3.144 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like | 0.59 | 39.0 | 2.59e-01 | 79.5% | 16.5% |
| 4031136 | 6043.1.1.3 ↗ | a+b two layers › yfeY-like › yfeY-like › yfeY-like › CAP_assoc_N | 0.59 | 39.0 | 4.28e-01 | 93.6% | 86.7% |
| 4856205 | 1032.1.1.2 ↗ | alpha arrays › Toxin A (TcdA) helical domain › Toxin A (TcdA) helical domain › Toxin A (TcdA) helical domain › TcdA_TcdB_pore, PF30720 | 0.58 | 42.0 | 3.10e-01 | 76.9% | 31.6% |
| 5024071 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 48.0 | 4.26e-01 | 93.6% | 67.0% |
| 3822639 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.56 | 44.0 | 2.85e-01 | 82.1% | 25.3% |
| 3711120 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 42.0 | 3.60e-01 | 83.3% | 57.1% |
| 3820070 | 5.1.2.62 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › FBA_1 | 0.55 | 46.0 | 3.33e-01 | 92.3% | 96.9% |
| 3809821 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.55 | 46.0 | 3.12e-01 | 100.0% | 86.6% |
| 4404709 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.55 | 44.0 | 3.50e-01 | 92.3% | 85.7% |
| 4012524 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.54 | 48.0 | 3.12e-01 | 98.7% | 45.1% |
| 3737835 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.54 | 46.0 | 4.35e-01 | 98.7% | 93.0% |
| 3505062 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.54 | 43.0 | 3.60e-01 | 88.5% | 60.7% |
| 3586488 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.53 | 44.0 | 2.99e-01 | 100.0% | 90.3% |
| 3832604 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.53 | 45.0 | 2.71e-01 | 100.0% | 46.8% |
| 3661144 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.53 | 45.0 | 2.99e-01 | 96.2% | 86.9% |
| 3221722 | 3180.1.1.2 ↗ | a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › F-box | 0.53 | 40.0 | 3.20e-01 | 82.1% | 51.2% |
| 3166921 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.52 | 42.0 | 2.81e-01 | 88.5% | 87.2% |
| 3240119 | 243.1.1.75 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 | 0.52 | 37.0 | 3.40e-01 | 75.6% | 92.4% |
| 3977419 | 3844.1.1.1 ↗ | a+b two layers › hydrogenase expression protein-like › hydrogenase expression protein-like › hydrogenase expression protein › HupH_C | 0.52 | 42.0 | 3.88e-01 | 92.3% | 68.0% |
| 3458862 | 331.4.1.2 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF | 0.51 | 41.0 | 3.57e-01 | 93.6% | 62.2% |
| 5056836 | 5.1.3.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylsulfotran_2 | 0.51 | 40.0 | 2.78e-01 | 93.6% | 70.9% |
| 3274867 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.51 | 43.0 | 3.03e-01 | 100.0% | 88.4% |
| 4939146 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 42.0 | 2.85e-01 | 100.0% | 51.8% |