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SRR1747018_scaffold_15_prodigal-single.1__X__X__00043
Bact-VirSRR1747018_scaffold_15_prodigal-single.1__X__X__00043
Identity
- Kingdom:
- phage
Quality
86.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-116
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2dkaB01 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.64 | 46.0 | 4.04e-01 | 75.7% | 79.5% |
| 3s1sA02 | 3.40.50.12420 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 49.0 | 3.34e-01 | 91.6% | 29.7% |
| 1g38A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 45.0 | 3.54e-01 | 87.9% | 93.7% |
| 1gqeA02 | 3.30.70.1660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 35.0 | 3.14e-01 | 70.1% | 75.9% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4928510 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.70 | 51.0 | 3.82e-01 | 76.6% | 87.1% |
| 4937889 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.65 | 54.0 | 3.64e-01 | 90.7% | 85.7% |
| 4012215 | 7528.1.1.0 ↗ | a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains | 0.64 | 47.0 | 3.93e-01 | 75.7% | 72.6% |
| 3447730 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.64 | 46.0 | 3.37e-01 | 74.8% | 33.5% |
| 3998715 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.62 | 53.0 | 4.15e-01 | 100.0% | 44.5% |
| 5027669 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.61 | 51.0 | 3.64e-01 | 90.7% | 81.2% |
| 3942265 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.61 | 48.0 | 3.59e-01 | 85.0% | 77.4% |
| 4936732 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.61 | 51.0 | 3.55e-01 | 90.7% | 74.9% |
| 5032412 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.61 | 51.0 | 3.65e-01 | 91.6% | 83.4% |
| 3938460 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.60 | 51.0 | 3.85e-01 | 99.1% | 38.8% |
| None | — | 0.60 | 50.0 | 3.72e-01 | 91.6% | 95.1% | |
| 4946359 | 2003.1.5.62 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Eco57I | 0.60 | 45.0 | 3.33e-01 | 81.3% | 93.3% |
| 3965017 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.59 | 44.0 | 3.25e-01 | 84.1% | 29.0% |
| 3622043 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.59 | 54.0 | 3.95e-01 | 100.0% | 38.2% |
| 3649918 | 11.1.1.389 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › EDR2_C | 0.58 | 41.0 | 3.14e-01 | 72.0% | 54.2% |
| 3970301 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.58 | 51.0 | 3.56e-01 | 100.0% | 42.4% |
| 3604450 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.57 | 52.0 | 4.13e-01 | 100.0% | 68.8% |
| 4968431 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.57 | 46.0 | 3.50e-01 | 87.9% | 91.4% |
| None | — | 0.56 | 51.0 | 3.61e-01 | 100.0% | 48.5% | |
| 3838763 | 304.44.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 | 0.56 | 37.0 | 4.17e-01 | 77.6% | 85.9% |
| 4269760 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.55 | 48.0 | 3.49e-01 | 96.3% | 75.6% |
| 3210813 | 7528.1.1.1 ↗ | a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › PGM_PMM_I | 0.55 | 41.0 | 3.47e-01 | 79.4% | 73.3% |
| 4017873 | 327.11.2.40 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF31052 | 0.52 | 35.0 | 4.04e-01 | 88.8% | 100.0% |
| 3587356 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.51 | 35.0 | 3.82e-01 | 72.0% | 94.4% |