Back to structures

SRR1747018_scaffold_15_prodigal-single.1__X__X__00055

Bact-Vir

SRR1747018_scaffold_15_prodigal-single.1__X__X__00055

Identity

Kingdom:
phage

Quality

77.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-99
PDB
CATH (67)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hrgA02 3.30.420.260 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, C-terminal domain 0.86 44.0 4.19e-01 94.9% 43.9%
2dleA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.82 48.0 5.11e-01 77.6% 66.3%
3r8qA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.80 50.0 5.25e-01 79.6% 68.9%
1qr4A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.78 48.0 5.11e-01 78.6% 70.1%
6xaxA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.78 49.0 5.22e-01 77.6% 72.9%
4eq3A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.77 52.0 5.01e-01 78.6% 62.0%
2cuhA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.77 48.0 5.09e-01 79.6% 70.5%
4u7cB04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.77 63.0 6.06e-01 87.8% 83.5%
5fmvA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.77 45.0 4.88e-01 77.6% 69.0%
3r8qA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.75 47.0 4.95e-01 77.6% 69.7%
3l5iA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.75 49.0 5.16e-01 78.6% 73.9%
3tesA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.75 48.0 4.90e-01 78.6% 67.0%
3t1wA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.75 48.0 4.94e-01 78.6% 68.5%
6brbD00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.75 48.0 5.04e-01 78.6% 72.4%
3s9dD01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.75 52.0 5.33e-01 83.7% 74.0%
1fnfA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.75 47.0 4.92e-01 77.6% 69.7%
1tdqA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.74 48.0 5.00e-01 78.6% 71.1%
1fnfA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.74 48.0 4.89e-01 78.6% 68.1%
6mfaA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.74 46.0 5.10e-01 77.6% 78.5%
2ekjA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.74 47.0 4.62e-01 78.6% 60.0%
1wfnA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.74 46.0 4.88e-01 78.6% 70.5%
3gm8A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.74 50.0 4.95e-01 79.6% 65.7%
7sf2A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.73 49.0 5.08e-01 79.6% 73.1%
3lqmA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.72 46.0 4.78e-01 81.6% 70.0%
4jklA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.71 45.0 4.65e-01 79.6% 66.3%
4ifeA02 3.30.420.240 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.71 40.0 3.03e-01 94.9% 23.3%
7rskA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.71 52.0 5.04e-01 77.6% 68.8%
2dkmA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.71 45.0 4.45e-01 78.6% 60.6%
1qg3A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.70 49.0 4.82e-01 80.6% 67.3%
1ex0A04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.70 45.0 4.60e-01 77.6% 67.4%
3qt2B03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.69 45.0 4.57e-01 77.6% 66.3%
4ypjA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.69 53.0 4.91e-01 79.6% 65.5%
1fyhB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.69 48.0 4.85e-01 82.7% 72.2%
1atrA03 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.68 38.0 3.95e-01 91.8% 58.4%
4nn5C02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 46.0 4.65e-01 79.6% 68.7%
4eq3A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 47.0 4.75e-01 82.7% 71.4%
3lb6D02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 47.0 4.86e-01 80.6% 76.1%
3fn9A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 51.0 4.78e-01 79.6% 65.0%
5dmyA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 51.0 4.77e-01 79.6% 66.9%
4cu7A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 50.0 4.69e-01 79.6% 66.9%
2wpwC00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.65 41.0 2.86e-01 99.0% 19.1%
4gniA03 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.65 36.0 3.83e-01 93.9% 59.8%
4jzjC02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 46.0 4.57e-01 82.7% 70.2%
5eh1A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 47.0 4.60e-01 80.6% 71.7%
2mraA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.63 46.0 4.40e-01 77.6% 89.7%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.62 45.0 4.71e-01 76.5% 100.0%
2v3sA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.62 40.0 4.11e-01 100.0% 66.7%
2yweA05 3.30.70.2570 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation factor 4, C-terminal domain 0.61 38.0 4.41e-01 82.7% 89.7%
4l3aA05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 30.0 3.25e-01 78.6% 53.8%
3da8B00 3.40.50.170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain 0.61 46.0 3.63e-01 100.0% 38.0%
2l6mA00 3.30.160.400 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.61 40.0 4.05e-01 100.0% 66.3%
3qtaB00 3.40.1550.10 Alpha Beta › 3-Layer(aba) Sandwich › Chemotaxis protein chec › CheC-like 0.61 41.0 3.34e-01 70.4% 88.9%
3cu7A06 2.20.130.20 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › 0.60 45.0 4.33e-01 78.6% 70.3%
2i44B00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.59 52.0 3.71e-01 100.0% 65.5%
3hvnA01 3.90.840.10 Alpha Beta › Alpha-Beta Complex › HIV-1 Reverse Transcriptase; Chain A, domain 3 › Thiol-activated cytolysin superfamily/Thiol-activated cytolysin, alpha-beta domain 0.59 51.0 4.29e-01 96.9% 65.1%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.58 50.0 4.24e-01 95.9% 88.6%
3a7rA02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.57 38.0 3.99e-01 94.9% 76.4%
6a6fA00 3.90.1010.10 Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › 0.57 34.0 3.11e-01 100.0% 42.6%
4bnqB00 3.90.950.10 Alpha Beta › Alpha-Beta Complex › Maf protein › 0.56 50.0 4.05e-01 100.0% 63.0%
2nvwA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.54 42.0 3.37e-01 84.7% 86.4%
1wftA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 39.0 3.88e-01 77.6% 73.1%
1kblA06 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.53 39.0 3.93e-01 77.6% 92.9%
4dohE02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 37.0 3.64e-01 82.7% 68.9%
3pqvA02 3.30.360.20 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › RNA 3'-terminal phosphate cyclase, insert domain 0.52 43.0 4.41e-01 90.8% 95.8%
2pn1A03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.52 42.0 3.89e-01 88.8% 70.0%
2gfgA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.52 40.0 3.29e-01 84.7% 88.5%
5fxdA03 3.40.462.10 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › FAD-linked oxidases, C-terminal domain 0.51 42.0 3.27e-01 92.9% 83.3%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3861730 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.83 50.0 5.19e-01 79.6% 65.6%
1478 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.81 51.0 5.25e-01 78.6% 67.0%
3908824 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.80 50.0 5.25e-01 78.6% 68.9%
3285401 3986.2.1.0 a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd 0.77 56.0 6.29e-01 95.9% 98.7%
3935249 11.1.1.955 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fn3_Dep-1_4th 0.77 51.0 5.15e-01 79.6% 67.0%
4999080 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.77 50.0 4.67e-01 76.5% 54.2%
4250793 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.76 61.0 5.43e-01 86.7% 65.0%
3540950 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.76 45.0 4.71e-01 77.6% 64.4%
5076799 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.75 52.0 4.88e-01 77.6% 60.0%
5062504 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.75 48.0 5.39e-01 78.6% 84.0%
4386515 330.1.1.30 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF27148 0.75 43.0 5.13e-01 95.9% 84.6%
4986774 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.74 55.0 5.04e-01 77.6% 65.6%
4360820 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.74 55.0 5.33e-01 78.6% 72.7%
3801221 245.1.1.0 a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 0.73 38.0 3.93e-01 75.5% 52.6%
4106397 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.73 42.0 4.75e-01 100.0% 74.7%
5046239 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.72 51.0 5.13e-01 98.0% 73.0%
3416442 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.71 43.0 4.50e-01 77.6% 65.6%
3569689 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.71 45.0 4.68e-01 78.6% 68.9%
3909335 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.71 42.0 4.43e-01 78.6% 64.4%
3935708 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.71 46.0 4.73e-01 79.6% 68.4%
3866856 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.69 45.0 3.20e-01 79.6% 22.1%
3512065 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.69 41.0 4.82e-01 99.0% 87.7%
5064572 2484.1.1.4 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H 0.69 43.0 3.91e-01 99.0% 46.9%
4103424 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.69 44.0 4.68e-01 100.0% 74.1%
5019500 11.1.1.1424 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7490 0.69 54.0 4.91e-01 87.8% 64.0%
3399617 245.1.1.1 a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C 0.69 37.0 3.88e-01 76.5% 55.6%
3263815 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.69 43.0 4.52e-01 100.0% 68.9%
5028431 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.69 50.0 5.45e-01 77.6% 93.8%
3990561 11.1.1.955 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fn3_Dep-1_4th 0.68 51.0 4.99e-01 79.6% 72.4%
5033505 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 50.0 4.84e-01 78.6% 73.6%
5035771 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.67 42.0 3.81e-01 99.0% 46.9%
4943448 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.67 41.0 3.86e-01 99.0% 50.8%
4555995 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.66 40.0 3.74e-01 94.9% 48.3%
3961733 330.10.1.0 a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain 0.66 42.0 4.37e-01 100.0% 68.9%
3995005 245.1.1.1 a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C 0.66 36.0 3.80e-01 76.5% 58.8%
3871796 11.2.1.76 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PF28335 0.65 57.0 5.62e-01 98.0% 89.5%
3660684 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 47.0 4.89e-01 77.6% 92.2%
4444614 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.63 43.0 4.71e-01 99.0% 85.0%
5021500 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 47.0 4.40e-01 78.6% 73.3%
3912524 210.2.1.1 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.61 54.0 3.88e-01 100.0% 58.0%
4943499 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 45.0 4.63e-01 77.6% 83.2%
5076800 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 45.0 3.13e-01 78.6% 24.5%
3495037 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 46.0 4.25e-01 83.7% 70.0%
5032255 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 36.0 4.11e-01 94.9% 84.3%
4017488 11.1.1.498 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LDB19 0.59 44.0 3.80e-01 78.6% 64.5%
4180376 7504.1.1.1 a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › Ham1p_like 0.58 53.0 4.15e-01 100.0% 68.0%
4537756 330.1.1.25 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF26980 0.57 37.0 3.91e-01 73.5% 74.1%
3506831 245.1.1.0 a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 0.57 37.0 4.04e-01 99.0% 81.2%
3666673 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 41.0 4.57e-01 74.5% 98.7%
3838338 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.57 42.0 4.47e-01 78.6% 92.9%
4130099 7504.1.1.1 a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › Ham1p_like 0.56 50.0 3.99e-01 100.0% 64.5%
5083094 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.55 38.0 2.89e-01 72.4% 89.6%
5016773 2484.1.1.21 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › BcrAD_BadFG 0.54 39.0 3.45e-01 75.5% 90.7%
223980 3576.1.1.0 a+b complex topology › Cas8-like › Cascade subunit CasA/Cse1/Cas8 › Cascade subunit CasA/Cse1/Cas8 0.54 46.0 3.02e-01 95.9% 50.0%
5042182 4210.1.1.0 a+b two layers › WGR domain › WGR domain › WGR domain 0.54 45.0 4.48e-01 88.8% 90.0%
3915206 10.32.1.203 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.54 47.0 3.88e-01 95.9% 72.6%
1681350 3576.1.1.0 a+b complex topology › Cas8-like › Cascade subunit CasA/Cse1/Cas8 › Cascade subunit CasA/Cse1/Cas8 0.54 45.0 2.90e-01 92.9% 50.6%
4039156 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.53 40.0 3.85e-01 98.0% 70.0%
4623130 7503.1.1.18 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › PF30449 0.53 47.0 4.26e-01 99.0% 91.1%
4642685 7503.1.1.3 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N 0.52 46.0 4.28e-01 96.9% 90.4%
4941861 244.3.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › NifU_N 0.52 38.0 3.55e-01 100.0% 60.8%
3274214 859.1.1.1 a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › HORMA 0.52 37.0 3.01e-01 73.5% 52.4%
4006151 3576.1.1.1 a+b complex topology › Cas8-like › Cascade subunit CasA/Cse1/Cas8 › Cascade subunit CasA/Cse1/Cas8 › CRISPR_Cse1 0.52 45.0 2.89e-01 96.9% 51.1%
5035683 245.1.1.1 a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C 0.52 36.0 3.83e-01 100.0% 81.8%
4927955 244.3.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › NifU_N 0.52 37.0 3.42e-01 100.0% 55.6%
4946729 512.1.1.5 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_3rd 0.51 42.0 3.27e-01 88.8% 88.4%
3228525 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.51 43.0 4.17e-01 96.9% 81.8%
4009844 7503.1.1.18 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › PF30449 0.51 46.0 4.18e-01 100.0% 95.4%
5037445 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.51 39.0 2.88e-01 79.6% 99.6%
3251163 245.1.1.1 a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C 0.50 38.0 3.97e-01 98.0% 88.9%
3511040 2485.2.1.1 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert 0.50 44.0 4.40e-01 96.9% 96.0%