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SRR1747018_scaffold_15_prodigal-single.1__X__X__00061

Bact-Vir

SRR1747018_scaffold_15_prodigal-single.1__X__X__00061

Identity

Kingdom:
phage

Quality

54.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 11-134
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qgaB01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.60 33.0 3.44e-01 95.2% 57.9%
2rekA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.53 44.0 3.97e-01 96.0% 65.1%
3lwjA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.52 45.0 3.99e-01 97.6% 67.9%
2oezA02 1.10.3900.10 Mainly Alpha › Orthogonal Bundle › YacF-like › YacF-like 0.52 44.0 4.03e-01 93.5% 87.1%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3756948 601.19.1.17 ↗ alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › Niban2 0.54 44.0 4.03e-01 89.5% 78.8%
3243786 6155.1.1.2 ↗ alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop 0.52 39.0 3.95e-01 88.7% 80.0%
3990847 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.52 40.0 4.21e-01 83.1% 97.3%
4992001 5059.1.1.1 ↗ alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA 0.51 44.0 3.53e-01 97.6% 67.3%
3202941 6155.1.1.2 ↗ alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop 0.50 33.0 3.45e-01 74.2% 71.3%
D2 medium residues 141-211
PDB
D3 medium residues 278-351_375-394
PDB
D4 medium residues 395-473
PDB