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SRR1747018_scaffold_15_prodigal-single.1__X__X__00070

Bact-Vir

SRR1747018_scaffold_15_prodigal-single.1__X__X__00070

Identity

Kingdom:
phage

Quality

56.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-122
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 26.0 3.24e-01 92.6% 60.0%
2xglA00 3.10.450.300 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › YebF/Colicin-M immunity protein 0.60 30.0 3.45e-01 94.3% 63.7%
2dkmA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 28.0 2.97e-01 86.9% 52.9%
7y8sA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 28.0 3.14e-01 86.9% 63.2%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3602240 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.61 27.0 3.49e-01 82.0% 72.9%
4375218 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.60 30.0 3.32e-01 86.1% 58.9%
5013360 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.54 26.0 2.95e-01 90.2% 58.9%
4057352 1119.1.1.1 ↗ a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW 0.51 43.0 3.45e-01 93.4% 98.8%
4025293 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.51 25.0 3.00e-01 86.1% 69.2%
D2 medium residues 244-274_345-446
PDB