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SRR1747018_scaffold_15_prodigal-single.1__X__X__00090
Bact-VirSRR1747018_scaffold_15_prodigal-single.1__X__X__00090
Identity
- Kingdom:
- phage
Quality
66.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-79
D2
high
residues 86-182
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3h3hB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.68 | 34.0 | 3.22e-01 | 82.5% | 39.2% |
| 4n6tA00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 35.0 | 3.84e-01 | 77.3% | 65.8% |
| 1bp1A01 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.61 | 50.0 | 4.14e-01 | 91.8% | 81.7% |
| 1zylA01 | 3.30.200.70 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.59 | 33.0 | 3.85e-01 | 78.4% | 77.1% |
| 3c6kA01 | 3.30.160.110 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Sirohaem synthase, central domain | 0.58 | 41.0 | 4.18e-01 | 97.9% | 75.5% |
| 1vkcA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 39.0 | 3.46e-01 | 70.1% | 82.7% |
| 4ebrA00 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.55 | 38.0 | 3.31e-01 | 71.1% | 59.9% |
| 2giaA00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.55 | 46.0 | 4.03e-01 | 93.8% | 90.3% |
| 2htdB00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 37.0 | 3.45e-01 | 72.2% | 75.0% |
| 7c38B01 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.54 | 43.0 | 3.00e-01 | 86.6% | 31.0% |
| 4avaA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 39.0 | 3.29e-01 | 79.4% | 98.4% |
| 3otlA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 45.0 | 3.93e-01 | 94.8% | 79.7% |
| 8a7dC01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 44.0 | 3.44e-01 | 90.7% | 81.5% |
| 1f49A05 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.53 | 40.0 | 2.89e-01 | 80.4% | 85.2% |
| 1ul7A00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.53 | 40.0 | 4.02e-01 | 88.7% | 79.4% |
| 2zf8A01 | 2.60.40.2540 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 45.0 | 3.97e-01 | 100.0% | 86.4% |
| 5hh1A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 38.0 | 3.09e-01 | 77.3% | 61.0% |
| 3ebwA01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 41.0 | 3.61e-01 | 85.6% | 73.2% |
| 7vd7A01 | 3.10.450.530 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system | 0.51 | 32.0 | 3.28e-01 | 83.5% | 64.1% |
| 3eliA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 42.0 | 3.74e-01 | 91.8% | 79.2% |
| 1xuvA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 42.0 | 3.57e-01 | 90.7% | 73.6% |
| 4i8oA02 | 3.30.160.690 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain | 0.51 | 37.0 | 3.80e-01 | 91.8% | 82.2% |
| 1jhnA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 45.0 | 3.45e-01 | 100.0% | 46.6% |
| 3ge2A00 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 40.0 | 4.18e-01 | 85.6% | 92.1% |
| 6f7bA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.51 | 39.0 | 2.84e-01 | 83.5% | 97.9% |
| 3q63F00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 43.0 | 3.86e-01 | 95.9% | 78.4% |
| 4htgA03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.50 | 39.0 | 4.23e-01 | 81.4% | 100.0% |
| 1qwdB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 41.0 | 3.45e-01 | 88.7% | 65.1% |
| 4xa2A01 | 3.30.700.10 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin | 0.50 | 39.0 | 3.76e-01 | 86.6% | 83.2% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 362621 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.68 | 34.0 | 3.22e-01 | 82.5% | 39.2% |
| 3936785 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.66 | 40.0 | 3.91e-01 | 75.3% | 56.2% |
| 4386896 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.63 | 50.0 | 3.56e-01 | 84.5% | 99.3% |
| 5012155 | 4221.1.1.0 ↗ | a+b two layers › YkuJ-like › YkuJ-like › YkuJ-like | 0.62 | 44.0 | 4.95e-01 | 100.0% | 97.3% |
| 3498392 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 46.0 | 4.35e-01 | 82.5% | 93.3% |
| 5019856 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.60 | 43.0 | 4.62e-01 | 78.4% | 84.7% |
| 5002129 | 10.1.1.126 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › DUF7308 | 0.59 | 51.0 | 4.05e-01 | 92.8% | 81.6% |
| 5052092 | 7515.1.1.6 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Phosphodiest | 0.59 | 51.0 | 3.28e-01 | 96.9% | 68.2% |
| 4666593 | 241.1.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C | 0.59 | 41.0 | 3.52e-01 | 72.2% | 60.4% |
| 3947165 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.58 | 43.0 | 3.79e-01 | 80.4% | 58.7% |
| 3234900 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.57 | 43.0 | 3.30e-01 | 80.4% | 66.0% |
| 4587403 | 3321.1.1.1 ↗ | a+b two layers › Meander beta sheet domain in fatty acid synthase subunit beta › Meander beta sheet domain in fatty acid synthase subunit beta › Meander beta sheet domain in fatty acid synthase subunit beta › FAS_meander | 0.56 | 42.0 | 3.58e-01 | 79.4% | 81.3% |
| 4195924 | 5.1.4.277 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_EIPR1 | 0.56 | 44.0 | 2.86e-01 | 83.5% | 35.6% |
| 5003221 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.55 | 42.0 | 4.04e-01 | 81.4% | 99.1% |
| 4625332 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 43.0 | 2.92e-01 | 84.5% | 36.0% |
| 3787121 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.54 | 41.0 | 3.81e-01 | 81.4% | 100.0% |
| 408891 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.54 | 44.0 | 3.86e-01 | 91.8% | 77.4% |
| 3941153 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.54 | 43.0 | 2.72e-01 | 85.6% | 29.1% |
| 3174353 | 5.1.4.573 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30151 | 0.53 | 42.0 | 2.77e-01 | 84.5% | 30.1% |
| 4160858 | 241.1.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C | 0.53 | 47.0 | 4.11e-01 | 99.0% | 90.6% |
| 5034160 | 225.1.1.40 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › DUF763 | 0.53 | 41.0 | 3.12e-01 | 84.5% | 42.4% |
| 4453707 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.52 | 42.0 | 3.35e-01 | 91.8% | 73.2% |
| 3583345 | 5.1.4.288 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › APEH_N | 0.52 | 45.0 | 2.97e-01 | 97.9% | 48.6% |
| 4804225 | 9.1.1.11 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_2 | 0.52 | 38.0 | 3.99e-01 | 77.3% | 87.4% |
| 5011312 | 206.1.1.9 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 | 0.51 | 40.0 | 3.19e-01 | 85.6% | 67.3% |
| 3469315 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.51 | 37.0 | 2.48e-01 | 78.4% | 93.2% |
| 73522 | 331.4.1.1 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 | 0.51 | 40.0 | 3.91e-01 | 91.8% | 78.0% |
| 3575714 | 5.1.4.329 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30693 | 0.50 | 43.0 | 2.80e-01 | 90.7% | 77.1% |