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SRR1747018_scaffold_15_prodigal-single.1__X__X__00097
Bact-VirSRR1747018_scaffold_15_prodigal-single.1__X__X__00097
Identity
- Kingdom:
- phage
Quality
77.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 75-209
Domain cluster:
rep: SRR1747065_scaffold_9_prodigal-single.1__X__X__00231__D100-274
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1odhA01 | 2.20.25.670 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › GCM domain, large subdomain | 0.67 | 30.0 | 4.12e-01 | 90.4% | 81.7% |
| 2ae6A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.65 | 44.0 | 4.33e-01 | 76.3% | 63.3% |
| 1nnvA01 | 3.10.450.140 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › dsDNA mimic, putative | 0.57 | 41.0 | 4.67e-01 | 80.0% | 100.0% |
| 3gw6A03 | 3.30.2460.10 | Alpha Beta › 2-Layer Sandwich › Endo-n-acetylneuraminidase fold › Endo-n-acetylneuraminidase domain | 0.56 | 22.0 | 3.01e-01 | 100.0% | 71.9% |
| 2nugB02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 28.0 | 3.74e-01 | 77.8% | 91.5% |
| 4y6iA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 30.0 | 3.40e-01 | 94.8% | 68.9% |
| 6mv2A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 31.0 | 3.50e-01 | 94.8% | 71.4% |
| 4fa8A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 30.0 | 3.39e-01 | 97.8% | 68.3% |
| 2fhqA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 30.0 | 3.10e-01 | 85.9% | 56.3% |
| 4e5xG00 | 2.60.40.3530 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 30.0 | 3.43e-01 | 77.8% | 77.8% |
| 3l60A01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.51 | 45.0 | 3.88e-01 | 99.3% | 82.7% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4291405 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.73 | 47.0 | 4.66e-01 | 88.9% | 60.7% |
| 3194363 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.65 | 47.0 | 3.87e-01 | 75.6% | 71.0% |
| None | — | 0.64 | 48.0 | 4.31e-01 | 78.5% | 65.9% | |
| 3783310 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.61 | 55.0 | 4.82e-01 | 100.0% | 66.7% |
| 5015520 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.60 | 39.0 | 3.35e-01 | 80.7% | 41.0% |
| 5032977 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 30.0 | 3.75e-01 | 92.6% | 78.8% |
| 5045714 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.58 | 53.0 | 4.78e-01 | 100.0% | 74.3% |
| 3217048 | 213.1.1.25 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 | 0.57 | 52.0 | 4.53e-01 | 99.3% | 66.5% |
| 3390785 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.57 | 48.0 | 4.07e-01 | 88.9% | 68.8% |
| 3982251 | 243.2.1.1 ↗ | a+b two layers › Cystatin-like › Putative dsDNA mimic › Putative dsDNA mimic › DUF440 | 0.56 | 42.0 | 4.57e-01 | 81.5% | 94.5% |
| 4874465 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.55 | 27.0 | 3.31e-01 | 96.3% | 74.7% |
| 5057515 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.54 | 26.0 | 3.54e-01 | 88.9% | 96.7% |
| 3230062 | 4023.1.1.0 ↗ | a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core | 0.53 | 35.0 | 3.95e-01 | 94.8% | 91.0% |
| 4026900 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.51 | 40.0 | 4.33e-01 | 92.6% | 97.4% |
| 4883912 | 4028.1.1.1 ↗ | beta barrels › Barrel domain in heme-dependent catalases › Barrel domain in heme-dependent catalases › Barrel domain in heme-dependent catalases › Catalase | 0.51 | 32.0 | 3.64e-01 | 78.5% | 83.2% |
| 3249604 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.51 | 33.0 | 2.87e-01 | 86.7% | 40.0% |