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SRR1747018_scaffold_15_prodigal-single.1__X__X__00102
Bact-VirSRR1747018_scaffold_15_prodigal-single.1__X__X__00102
Identity
- Kingdom:
- phage
Quality
86.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 124-235
Domain cluster:
rep: SRR1747018_scaffold_2_1202_curated_prodigal-single.1__X__X__00319__D987-1069
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13180.13 best | PDZ_2 | 42.4 | 9.30e-11 | 80.4% | 72.5% |
| PF00595.30 | PDZ | 36.4 | 7.70e-09 | 76.8% | 88.9% |
| PF17820.8 | PDZ_6 | 43.4 | 3.20e-11 | 51.8% | 96.3% |
D2
high
residues 239-305_325-365_397-435
Domain cluster:
rep: KR093645.1__AKI27900.1__X__00033__D371-464_485-529_558-577
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03572.24 best | Peptidase_S41 | 46.4 | 4.50e-12 | 42.9% | 35.8% |
| PF03572.24 | Peptidase_S41 | 24.5 | 2.50e-05 | 27.9% | 20.6% |
CATH (63)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ghnA03 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.87 | 84.0 | 7.91e-01 | 100.0% | 95.9% |
| 3dorA03 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.87 | 83.0 | 6.74e-01 | 100.0% | 87.0% |
| 3k50A03 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.86 | 83.0 | 7.65e-01 | 100.0% | 95.5% |
| 1fc6A03 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.86 | 81.0 | 7.26e-01 | 97.3% | 99.0% |
| 4l8kD02 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.85 | 81.0 | 6.97e-01 | 100.0% | 83.8% |
| 1k32A05 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.80 | 77.0 | 6.71e-01 | 100.0% | 94.2% |
| 1j7xA02 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.79 | 76.0 | 6.55e-01 | 100.0% | 84.1% |
| 4lurA02 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.79 | 76.0 | 6.27e-01 | 100.0% | 82.1% |
| 4qtpD00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.74 | 53.0 | 5.89e-01 | 100.0% | 93.0% |
| 4xs5B00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.74 | 52.0 | 5.80e-01 | 99.3% | 92.1% |
| 4hylA00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.73 | 52.0 | 5.80e-01 | 100.0% | 93.8% |
| 3r6hA00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.72 | 69.0 | 5.83e-01 | 100.0% | 82.2% |
| 3ny7A00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.72 | 53.0 | 5.88e-01 | 100.0% | 94.9% |
| 1vc1A00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.71 | 50.0 | 5.71e-01 | 100.0% | 96.4% |
| 4dghA00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.71 | 52.0 | 5.50e-01 | 97.3% | 85.9% |
| 4bxoA01 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.71 | 44.0 | 4.58e-01 | 99.3% | 66.7% |
| 4dgfA00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.70 | 52.0 | 5.65e-01 | 98.6% | 92.6% |
| 3lklA00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.68 | 41.0 | 4.97e-01 | 75.5% | 94.6% |
| 4c89C00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.65 | 60.0 | 4.55e-01 | 99.3% | 74.6% |
| 7b1xA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.64 | 58.0 | 4.66e-01 | 100.0% | 81.7% |
| 4q05A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.64 | 58.0 | 4.51e-01 | 100.0% | 74.6% |
| 3u61C01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 43.0 | 4.17e-01 | 80.3% | 61.1% |
| 7jt8I02 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.64 | 49.0 | 5.00e-01 | 98.6% | 82.6% |
| 5mifA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.63 | 58.0 | 4.57e-01 | 100.0% | 82.5% |
| 4ltyA01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.63 | 55.0 | 4.44e-01 | 95.2% | 94.0% |
| 4xvcA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.63 | 57.0 | 4.53e-01 | 100.0% | 80.8% |
| 6hfzA01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.62 | 56.0 | 4.99e-01 | 100.0% | 80.4% |
| 3lloA00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.61 | 49.0 | 5.12e-01 | 100.0% | 93.2% |
| 2mzbA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.60 | 38.0 | 3.48e-01 | 94.6% | 47.4% |
| 1ur4A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.60 | 54.0 | 4.02e-01 | 99.3% | 74.9% |
| 2hzgA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.59 | 52.0 | 4.45e-01 | 98.6% | 85.9% |
| 4jhmA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.59 | 51.0 | 4.28e-01 | 95.2% | 74.3% |
| 4aeeA03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.59 | 50.0 | 3.92e-01 | 93.2% | 64.8% |
| 4l80D00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.59 | 52.0 | 4.03e-01 | 99.3% | 86.6% |
| 3cjpA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.58 | 53.0 | 4.38e-01 | 100.0% | 76.7% |
| 7blfB01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 50.0 | 3.80e-01 | 95.9% | 85.8% |
| 3w0lD02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.58 | 53.0 | 4.02e-01 | 100.0% | 50.3% |
| 4pysA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 51.0 | 3.87e-01 | 99.3% | 85.4% |
| 3kw3A02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.58 | 47.0 | 4.16e-01 | 87.1% | 66.0% |
| 3k6kA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 51.0 | 4.07e-01 | 98.6% | 85.5% |
| 2p8bA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.57 | 51.0 | 4.39e-01 | 99.3% | 86.4% |
| 3sqsA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.57 | 51.0 | 4.31e-01 | 99.3% | 85.1% |
| 1vhnA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 50.0 | 4.32e-01 | 97.3% | 79.9% |
| 4r9xA00 | 3.20.20.380 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Copper homeostasis (CutC) domain | 0.56 | 50.0 | 4.35e-01 | 96.6% | 83.5% |
| 3qfeB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 48.0 | 3.83e-01 | 93.2% | 66.2% |
| 1jpdX02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.56 | 50.0 | 4.43e-01 | 95.9% | 86.5% |
| 1dtnA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.56 | 50.0 | 4.35e-01 | 99.3% | 85.2% |
| 3on5B02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 47.0 | 4.64e-01 | 100.0% | 85.4% |
| 1j5sA01 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.56 | 49.0 | 3.80e-01 | 100.0% | 83.0% |
| 3dxiA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 49.0 | 3.88e-01 | 95.2% | 50.5% |
| 3ndoA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 49.0 | 4.31e-01 | 98.0% | 88.0% |
| 2p9bA02 | 3.30.110.90 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Amidohydrolase | 0.55 | 30.0 | 3.84e-01 | 95.2% | 90.7% |
| 2fhxA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.55 | 46.0 | 3.96e-01 | 92.5% | 82.4% |
| 3b0pA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 49.0 | 4.22e-01 | 100.0% | 84.9% |
| 1nni100 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.54 | 47.0 | 4.48e-01 | 93.9% | 97.1% |
| 3b8iC00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.54 | 47.0 | 3.92e-01 | 98.6% | 74.1% |
| 6dqoA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.53 | 46.0 | 4.36e-01 | 94.6% | 98.8% |
| 7clgA01 | 3.30.870.10 | Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A | 0.53 | 42.0 | 3.90e-01 | 85.0% | 75.3% |
| 1up7A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 38.0 | 3.96e-01 | 91.2% | 80.3% |
| 4hy3A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 41.0 | 3.83e-01 | 83.7% | 76.1% |
| 1pdoA00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.52 | 36.0 | 3.77e-01 | 100.0% | 79.8% |
| 4c76A00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.51 | 46.0 | 4.30e-01 | 100.0% | 89.6% |
| 3l4bC01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 36.0 | 4.01e-01 | 83.0% | 93.2% |
ECOD (80)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4263877 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.95 | 79.0 | 7.12e-01 | 85.0% | 94.2% |
| 4134619 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.95 | 76.0 | 7.46e-01 | 81.6% | 98.1% |
| 4495999 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.94 | 91.0 | 8.27e-01 | 100.0% | 96.2% |
| 3829518 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.93 | 91.0 | 7.42e-01 | 100.0% | 90.0% |
| 4486980 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.93 | 90.0 | 7.28e-01 | 100.0% | 92.4% |
| 3968847 | 2486.1.1.8 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41,DUF3340 | 0.92 | 89.0 | 6.47e-01 | 100.0% | 95.7% |
| 4307447 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.90 | 87.0 | 7.69e-01 | 100.0% | 98.5% |
| 3839764 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.89 | 87.0 | 7.17e-01 | 100.0% | 91.5% |
| 1406102 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.89 | 86.0 | 6.59e-01 | 100.0% | 95.9% |
| 3164821 | 2486.1.1.8 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41,DUF3340 | 0.89 | 86.0 | 6.23e-01 | 100.0% | 90.3% |
| 5080813 | 2486.1.1.0 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase | 0.88 | 85.0 | 7.04e-01 | 100.0% | 96.2% |
| 1174358 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.87 | 84.0 | 7.47e-01 | 100.0% | 94.9% |
| 1070249 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.87 | 83.0 | 6.97e-01 | 100.0% | 96.5% |
| 1099098 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.87 | 83.0 | 6.21e-01 | 100.0% | 88.4% |
| 2564163 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.86 | 83.0 | 7.40e-01 | 100.0% | 96.4% |
| 4877105 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.86 | 69.0 | 6.24e-01 | 82.3% | 97.4% |
| 1030864 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.86 | 83.0 | 7.12e-01 | 100.0% | 97.2% |
| 4521582 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.86 | 82.0 | 6.08e-01 | 100.0% | 86.0% |
| 1393683 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.85 | 81.0 | 6.78e-01 | 100.0% | 86.2% |
| 4022124 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.84 | 80.0 | 5.92e-01 | 100.0% | 80.3% |
| 4944017 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.82 | 78.0 | 6.20e-01 | 100.0% | 86.3% |
| 4052423 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.81 | 77.0 | 6.64e-01 | 100.0% | 90.2% |
| 3674852 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.81 | 78.0 | 6.84e-01 | 100.0% | 90.6% |
| 1725854 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.80 | 77.0 | 6.66e-01 | 100.0% | 94.2% |
| None | — | 0.80 | 76.0 | 6.40e-01 | 100.0% | 85.7% | |
| 4285425 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.80 | 76.0 | 6.75e-01 | 100.0% | 83.5% |
| None | — | 0.80 | 76.0 | 6.68e-01 | 100.0% | 86.3% | |
| 3564180 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.80 | 76.0 | 6.34e-01 | 100.0% | 83.8% |
| None | — | 0.79 | 76.0 | 6.55e-01 | 100.0% | 84.7% | |
| None | — | 0.79 | 76.0 | 6.43e-01 | 100.0% | 87.1% | |
| 1422901 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.79 | 76.0 | 6.27e-01 | 100.0% | 82.1% |
| 5053391 | 2496.1.1.0 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like | 0.79 | 59.0 | 6.39e-01 | 100.0% | 90.4% |
| 3749256 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.79 | 75.0 | 6.16e-01 | 100.0% | 82.0% |
| 4882730 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.76 | 69.0 | 6.22e-01 | 95.2% | 98.4% |
| 118104 | 2496.1.1.4 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › SpoIIAA-like | 0.76 | 56.0 | 6.21e-01 | 100.0% | 93.3% |
| 3280927 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.76 | 52.0 | 6.03e-01 | 98.0% | 97.1% |
| 4952186 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.75 | 54.0 | 6.13e-01 | 100.0% | 98.2% |
| 3279675 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.75 | 54.0 | 6.13e-01 | 100.0% | 98.2% |
| 4468651 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.75 | 53.0 | 6.08e-01 | 99.3% | 97.3% |
| 4228838 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.74 | 53.0 | 6.03e-01 | 100.0% | 98.2% |
| 2792047 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.74 | 54.0 | 5.65e-01 | 100.0% | 83.3% |
| 1498185 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.74 | 53.0 | 5.81e-01 | 100.0% | 89.3% |
| 154202 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.74 | 52.0 | 5.80e-01 | 100.0% | 92.2% |
| 3284133 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.73 | 52.0 | 5.85e-01 | 100.0% | 93.9% |
| 3283969 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.73 | 52.0 | 5.94e-01 | 98.6% | 98.2% |
| 5075843 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.72 | 53.0 | 5.76e-01 | 100.0% | 91.9% |
| 11464 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.71 | 50.0 | 5.71e-01 | 100.0% | 96.4% |
| 3408059 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.71 | 51.0 | 5.39e-01 | 100.0% | 82.1% |
| 138986 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.71 | 51.0 | 5.49e-01 | 97.3% | 85.9% |
| 5056387 | 2496.1.1.0 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like | 0.70 | 52.0 | 5.65e-01 | 100.0% | 92.0% |
| 3672606 | 7516.1.1.69 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_92 | 0.69 | 42.0 | 3.45e-01 | 74.8% | 33.2% |
| 3952351 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.68 | 46.0 | 5.28e-01 | 100.0% | 93.5% |
| 5016881 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.68 | 55.0 | 5.52e-01 | 100.0% | 84.0% |
| 4206570 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.68 | 52.0 | 5.63e-01 | 100.0% | 95.2% |
| 4591792 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.65 | 57.0 | 5.66e-01 | 100.0% | 90.0% |
| 5004742 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.64 | 54.0 | 5.44e-01 | 100.0% | 88.0% |
| 3282382 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.64 | 54.0 | 5.38e-01 | 100.0% | 86.7% |
| 3686074 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.62 | 57.0 | 4.62e-01 | 100.0% | 82.9% |
| 2526997 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.62 | 56.0 | 4.87e-01 | 100.0% | 74.8% |
| 4882843 | 2002.1.1.33 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_20 | 0.62 | 49.0 | 4.02e-01 | 85.0% | 81.1% |
| 3287956 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.61 | 54.0 | 5.41e-01 | 100.0% | 92.0% |
| 4443803 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.61 | 53.0 | 4.43e-01 | 94.6% | 93.5% |
| 4013446 | 2496.1.1.0 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like | 0.61 | 56.0 | 4.87e-01 | 100.0% | 89.1% |
| 4002702 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.60 | 44.0 | 3.78e-01 | 76.2% | 57.9% |
| 3209937 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.60 | 56.0 | 5.10e-01 | 100.0% | 85.3% |
| 3260634 | 129.1.1.0 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like | 0.60 | 53.0 | 4.69e-01 | 96.6% | 85.2% |
| 3913410 | 7579.1.1.44 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 | 0.58 | 52.0 | 4.35e-01 | 100.0% | 73.6% |
| 3593334 | 2496.1.1.0 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like | 0.58 | 54.0 | 5.17e-01 | 100.0% | 93.3% |
| 3273014 | 2002.1.1.174 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C | 0.58 | 52.0 | 4.27e-01 | 100.0% | 83.6% |
| 3495742 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.58 | 53.0 | 4.68e-01 | 100.0% | 78.1% |
| 3904750 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.57 | 51.0 | 4.57e-01 | 100.0% | 90.1% |
| 4180126 | 2002.1.1.57 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › URO-D | 0.57 | 52.0 | 3.93e-01 | 99.3% | 74.3% |
| 5045711 | 2007.2.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_1 | 0.57 | 50.0 | 5.04e-01 | 95.2% | 96.0% |
| 4092963 | 2006.1.6.38 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF444 | 0.57 | 51.0 | 4.56e-01 | 95.9% | 85.5% |
| 5013541 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.56 | 49.0 | 4.21e-01 | 93.2% | 63.6% |
| 5060442 | 2007.2.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_1 | 0.56 | 49.0 | 5.01e-01 | 95.2% | 99.3% |
| 4967153 | 2007.2.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_1 | 0.56 | 49.0 | 4.89e-01 | 95.9% | 99.3% |
| 5011069 | 246.2.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases | 0.54 | 46.0 | 4.41e-01 | 94.6% | 96.0% |
| 5071603 | 2002.1.1.79 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF72 | 0.54 | 48.0 | 4.05e-01 | 99.3% | 74.9% |
| 5037283 | 2002.1.1.77 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › RNase_P_p30 | 0.51 | 44.0 | 3.87e-01 | 95.2% | 95.7% |
D3
medium
residues 306-324_366-396
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3k50A01 | 3.30.750.170 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.82 | 74.0 | 5.73e-01 | 100.0% | 48.1% |
| 2kr7A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.64 | 33.0 | 3.20e-01 | 76.0% | 38.6% |
| 2byvE05 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.61 | 36.0 | 3.17e-01 | 84.0% | 35.4% |
| 3gqhA02 | 4.10.80.40 | Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › succinate dehydrogenase protein domain | 0.54 | 34.0 | 3.72e-01 | 76.0% | 80.0% |
| 4obiA00 | 2.60.320.10 | Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › N-utilization substance G protein NusG, insert domain | 0.53 | 45.0 | 3.72e-01 | 94.0% | 96.6% |
| 1i82A00 | 2.60.40.1190 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 45.0 | 3.07e-01 | 100.0% | 56.6% |
| 1se8A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 36.0 | 2.90e-01 | 74.0% | 85.6% |
| 3fn2A00 | 3.30.2200.10 | Alpha Beta › 2-Layer Sandwich › histidine kinase doma clostridium symbiosum atcc 14940 › histidine kinase doma clostridium symbiosum atcc 14940 | 0.52 | 41.0 | 3.28e-01 | 94.0% | 44.3% |
| 3vpyA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.51 | 42.0 | 3.05e-01 | 94.0% | 78.6% |
| 1fs7A01 | 1.10.1130.10 | Mainly Alpha › Orthogonal Bundle › Flavocytochrome C3; Chain A, domain 2 › Flavocytochrome C3; Chain A | 0.50 | 36.0 | 2.35e-01 | 86.0% | 45.7% |
| 5cflA02 | 3.40.50.12100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Stimulator of interferon genes protein | 0.50 | 35.0 | 2.58e-01 | 72.0% | 44.9% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3674852 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.85 | 78.0 | 5.05e-01 | 100.0% | 45.3% |
| 3829518 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.85 | 76.0 | 4.81e-01 | 100.0% | 38.5% |
| 1030864 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.84 | 75.0 | 4.83e-01 | 100.0% | 42.8% |
| 4486980 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.84 | 75.0 | 4.70e-01 | 100.0% | 37.2% |
| 4263877 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.83 | 73.0 | 4.87e-01 | 100.0% | 47.9% |
| 3677873 | 2486.1.1.0 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase | 0.82 | 72.0 | 4.73e-01 | 100.0% | 50.7% |
| 4307447 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.79 | 70.0 | 4.63e-01 | 100.0% | 46.5% |
| 2564163 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.72 | 62.0 | 4.18e-01 | 100.0% | 46.9% |
| 4988658 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.61 | 50.0 | 3.53e-01 | 94.0% | 68.1% |
| 4954388 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.54 | 41.0 | 2.92e-01 | 86.0% | 98.2% |
| 1144694 | 714.1.1.1 ↗ | beta sandwiches › N-utilization substance G protein NusG, insert domain › N-utilization substance G protein NusG, insert domain › N-utilization substance G protein NusG, insert domain › NusG_II | 0.53 | 45.0 | 3.72e-01 | 94.0% | 96.6% |
| 3477515 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.51 | 39.0 | 3.05e-01 | 84.0% | 93.0% |
| 5045979 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.51 | 37.0 | 2.40e-01 | 82.0% | 28.5% |
| 5010503 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 41.0 | 3.36e-01 | 92.0% | 86.3% |
| 4093401 | 4187.2.1.1 ↗ | a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 › NAGPA | 0.50 | 30.0 | 2.49e-01 | 80.0% | 27.4% |