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SRR1747018_scaffold_15_prodigal-single.1__X__X__00140
Bact-VirSRR1747018_scaffold_15_prodigal-single.1__X__X__00140
Identity
- Kingdom:
- phage
Quality
94.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 33-305
Domain cluster:
rep: IMGVR_UViG_3300010239_000028-3300010239-Ga0136451_1000008938__D83-314
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF15617.13 best | C-C_Bond_Lyase | 257.3 | 2.80e-76 | 99.6% | 82.8% |
CATH (64)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3qllA00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.89 | 66.0 | 7.50e-01 | 98.9% | 95.8% |
| 1sgjA00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.87 | 71.0 | 7.75e-01 | 100.0% | 99.1% |
| 1u5hA00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.86 | 68.0 | 7.51e-01 | 100.0% | 98.7% |
| 5vxsA01 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.85 | 72.0 | 7.34e-01 | 96.7% | 88.1% |
| 3qqwC01 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.83 | 74.0 | 7.57e-01 | 100.0% | 95.1% |
| 4l9yD00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.82 | 74.0 | 7.60e-01 | 99.6% | 96.2% |
| 4l80D00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.79 | 74.0 | 6.74e-01 | 100.0% | 76.5% |
| 3oyzA01 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.79 | 74.0 | 7.54e-01 | 100.0% | 99.6% |
| 3o63A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.75 | 56.0 | 6.32e-01 | 100.0% | 97.7% |
| 4lusA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.75 | 54.0 | 5.99e-01 | 94.9% | 92.1% |
| 3oo2A02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.74 | 53.0 | 5.93e-01 | 94.9% | 92.4% |
| 4uxdA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.74 | 58.0 | 5.83e-01 | 98.9% | 79.6% |
| 3cuxA01 | 3.20.20.360 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Malate synthase, domain 3 | 0.74 | 71.0 | 6.22e-01 | 100.0% | 73.4% |
| 3b4uA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.72 | 58.0 | 5.72e-01 | 98.2% | 78.0% |
| 4v15A02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.72 | 53.0 | 5.86e-01 | 94.9% | 91.5% |
| 3s5nA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.72 | 57.0 | 5.59e-01 | 100.0% | 75.3% |
| 3qfeB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.72 | 57.0 | 5.53e-01 | 100.0% | 73.8% |
| 6arhA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.72 | 58.0 | 5.61e-01 | 98.9% | 75.0% |
| 2pljA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.72 | 54.0 | 5.85e-01 | 95.2% | 91.3% |
| 1geqB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.70 | 61.0 | 6.40e-01 | 98.9% | 100.0% |
| 3rr1B02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.70 | 55.0 | 5.89e-01 | 97.4% | 93.7% |
| 3gy1B02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.69 | 55.0 | 5.89e-01 | 97.8% | 94.1% |
| 2vrkA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.69 | 64.0 | 5.79e-01 | 98.2% | 99.7% |
| 2hzgA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.69 | 55.0 | 5.74e-01 | 98.2% | 90.3% |
| 3thaB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.68 | 60.0 | 6.25e-01 | 98.5% | 99.6% |
| 3zmrB02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.68 | 64.0 | 5.70e-01 | 100.0% | 93.4% |
| 5k9xA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.68 | 61.0 | 6.29e-01 | 100.0% | 98.5% |
| 3n4fA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.68 | 56.0 | 5.71e-01 | 97.8% | 88.6% |
| 3hpxA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.68 | 63.0 | 6.16e-01 | 98.2% | 90.3% |
| 1telA02 | 3.20.20.110 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain | 0.67 | 60.0 | 5.95e-01 | 100.0% | 90.8% |
| 2f6uA00 | 3.20.20.390 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › FMN-linked oxidoreductases | 0.67 | 55.0 | 5.90e-01 | 100.0% | 100.0% |
| 1fobA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.67 | 62.0 | 5.76e-01 | 98.2% | 100.0% |
| 2dskA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.66 | 62.0 | 6.00e-01 | 99.3% | 95.7% |
| 2wnwA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.66 | 62.0 | 5.72e-01 | 99.6% | 98.8% |
| 3erpA01 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.66 | 62.0 | 6.03e-01 | 100.0% | 93.0% |
| 3s6dA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.65 | 61.0 | 6.17e-01 | 100.0% | 99.6% |
| 3i10A00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.65 | 61.0 | 6.07e-01 | 100.0% | 96.4% |
| 2ww5A02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.65 | 47.0 | 5.41e-01 | 97.1% | 100.0% |
| 6hq7B02 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.64 | 52.0 | 5.39e-01 | 91.9% | 89.2% |
| 6ovqA00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.63 | 60.0 | 5.79e-01 | 100.0% | 91.4% |
| 1gqiA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.63 | 56.0 | 5.31e-01 | 93.8% | 100.0% |
| 1rhcA00 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.63 | 58.0 | 5.47e-01 | 98.5% | 99.4% |
| 2b81C00 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.62 | 58.0 | 5.53e-01 | 100.0% | 98.4% |
| 3tlqA00 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.62 | 50.0 | 5.36e-01 | 94.1% | 96.6% |
| 3i4kA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.61 | 48.0 | 4.99e-01 | 90.1% | 87.3% |
| 1k70A02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.61 | 54.0 | 5.25e-01 | 94.1% | 97.4% |
| 1z8hA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.60 | 40.0 | 4.61e-01 | 86.4% | 90.1% |
| 4rshA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.57 | 37.0 | 4.54e-01 | 99.6% | 99.4% |
| 4wesB04 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.57 | 21.0 | 3.48e-01 | 70.3% | 92.9% |
| 4cczA01 | 3.20.20.330 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Homocysteine-binding-like domain | 0.56 | 53.0 | 5.04e-01 | 100.0% | 96.5% |
| 4eukA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 28.0 | 3.95e-01 | 90.5% | 97.1% |
| 5tnvA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.56 | 51.0 | 4.91e-01 | 98.2% | 99.7% |
| 3paoB00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.55 | 51.0 | 4.86e-01 | 97.4% | 96.5% |
| 4kv7A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 32.0 | 4.07e-01 | 96.0% | 98.1% |
| 4j3cB02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.54 | 33.0 | 4.08e-01 | 99.3% | 96.4% |
| 5ib0A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 25.0 | 3.36e-01 | 82.1% | 81.8% |
| 4o5aA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 27.0 | 3.61e-01 | 79.5% | 90.6% |
| 3ktyA01 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.54 | 32.0 | 4.10e-01 | 98.5% | 99.4% |
| 5a4aA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.53 | 37.0 | 4.22e-01 | 93.8% | 92.3% |
| 2jl1A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 34.0 | 4.17e-01 | 99.3% | 100.0% |
| 5hj7A01 | 3.40.50.1860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 24.0 | 3.21e-01 | 100.0% | 77.5% |
| 2dxqA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 26.0 | 3.35e-01 | 81.7% | 82.3% |
| 2i6dA02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.52 | 30.0 | 3.89e-01 | 98.9% | 98.1% |
| 1yd9B00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.50 | 33.0 | 3.82e-01 | 92.3% | 92.5% |
ECOD (64)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3282809 | 2002.1.1.218 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › C-C_Bond_Lyase | 0.92 | 90.0 | 7.80e-01 | 100.0% | 74.7% |
| 3978333 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.88 | 73.0 | 7.30e-01 | 100.0% | 83.6% |
| 4981233 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.88 | 72.0 | 7.15e-01 | 98.9% | 80.4% |
| 3731014 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.87 | 75.0 | 7.18e-01 | 98.9% | 78.7% |
| 4984241 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.87 | 74.0 | 7.19e-01 | 98.9% | 80.3% |
| 3973617 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.87 | 69.0 | 6.99e-01 | 97.4% | 81.5% |
| 3956281 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.87 | 68.0 | 6.83e-01 | 99.6% | 78.9% |
| 3164257 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.87 | 73.0 | 7.11e-01 | 99.3% | 80.3% |
| 5040463 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.87 | 74.0 | 7.23e-01 | 99.3% | 81.4% |
| 4014117 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.86 | 76.0 | 7.22e-01 | 99.6% | 79.4% |
| 3976992 | 2002.1.1.300 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI, C-C_Bond_Lyase | 0.86 | 73.0 | 7.11e-01 | 100.0% | 80.3% |
| 3213629 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.85 | 76.0 | 7.09e-01 | 100.0% | 78.1% |
| 3272724 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.83 | 74.0 | 6.80e-01 | 100.0% | 74.6% |
| 2010840 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.80 | 75.0 | 6.97e-01 | 100.0% | 80.8% |
| 1145757 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.80 | 74.0 | 6.80e-01 | 100.0% | 76.4% |
| 5038648 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.79 | 76.0 | 5.95e-01 | 100.0% | 55.8% |
| 3602002 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.79 | 76.0 | 6.70e-01 | 100.0% | 74.1% |
| 4963605 | 2002.1.1.17 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PEPcase | 0.73 | 68.0 | 4.68e-01 | 99.6% | 59.7% |
| 95373 | 2002.1.1.100 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ComA | 0.73 | 54.0 | 5.88e-01 | 99.6% | 91.1% |
| None | — | 0.71 | 68.0 | 5.57e-01 | 99.6% | 61.1% | |
| 4261564 | 2002.1.1.177 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PEPcase_2 | 0.71 | 67.0 | 5.50e-01 | 99.3% | 61.4% |
| 1169864 | 2002.1.1.13 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red | 0.69 | 53.0 | 5.70e-01 | 88.3% | 93.0% |
| 3178067 | 2002.1.1.56 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dus | 0.68 | 59.0 | 5.41e-01 | 98.9% | 71.0% |
| 4130482 | 2002.1.1.36 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pterin_bind | 0.68 | 63.0 | 6.37e-01 | 98.2% | 96.7% |
| 4146766 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.67 | 58.0 | 5.77e-01 | 100.0% | 86.3% |
| 4306176 | 2002.1.1.174 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C | 0.67 | 55.0 | 5.14e-01 | 97.8% | 70.5% |
| 993460 | 2002.1.1.85 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_30 | 0.67 | 62.0 | 5.74e-01 | 98.2% | 99.4% |
| 4478309 | 2002.1.1.151 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_53 | 0.66 | 62.0 | 5.57e-01 | 98.5% | 94.8% |
| 1734786 | 2002.1.1.76 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DeoC | 0.66 | 55.0 | 5.81e-01 | 97.8% | 95.9% |
| 139718 | 2002.1.1.15 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA | 0.66 | 60.0 | 6.15e-01 | 100.0% | 99.2% |
| 4864828 | 2002.1.1.78 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PcrB | 0.66 | 53.0 | 5.78e-01 | 99.3% | 100.0% |
| 4983514 | 2002.1.1.44 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TatD_DNase | 0.66 | 53.0 | 5.51e-01 | 97.8% | 88.8% |
| None | — | 0.66 | 54.0 | 5.21e-01 | 97.8% | 76.7% | |
| 4984480 | 2002.1.1.25 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like | 0.65 | 59.0 | 5.76e-01 | 98.2% | 87.5% |
| 5054137 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.65 | 56.0 | 4.96e-01 | 90.5% | 90.5% |
| 3209906 | 145.1.1.34 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › DUF7730 | 0.64 | 42.0 | 4.89e-01 | 74.0% | 92.6% |
| 4989163 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.63 | 45.0 | 4.84e-01 | 72.5% | 99.2% |
| 3839820 | 2002.1.1.67 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pro_dh | 0.63 | 57.0 | 5.13e-01 | 95.2% | 71.5% |
| 3956628 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.62 | 58.0 | 5.40e-01 | 99.3% | 99.7% |
| 3603343 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.62 | 54.0 | 5.60e-01 | 98.2% | 99.6% |
| 5058230 | 2002.1.1.151 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_53 | 0.62 | 58.0 | 5.51e-01 | 100.0% | 96.8% |
| 5053852 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.60 | 52.0 | 4.81e-01 | 91.2% | 73.1% |
| 4954342 | 2002.1.1.224 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › SPASM | 0.60 | 53.0 | 4.79e-01 | 91.6% | 89.2% |
| None | — | 0.60 | 56.0 | 5.10e-01 | 100.0% | 90.4% | |
| 5083314 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.60 | 55.0 | 5.44e-01 | 98.2% | 100.0% |
| 5073051 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.60 | 54.0 | 5.48e-01 | 97.1% | 98.9% |
| 5033154 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.59 | 52.0 | 5.18e-01 | 93.4% | 98.9% |
| 4203358 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.59 | 37.0 | 4.20e-01 | 96.0% | 81.5% |
| 4943846 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.58 | 46.0 | 4.61e-01 | 81.3% | 84.6% |
| 5021167 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.58 | 49.0 | 5.21e-01 | 92.3% | 99.2% |
| 3481070 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.57 | 52.0 | 4.83e-01 | 97.8% | 83.8% |
| 5019934 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.56 | 50.0 | 4.57e-01 | 94.5% | 86.5% |
| 5051884 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.56 | 51.0 | 4.46e-01 | 98.2% | 94.6% |
| 4968833 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.56 | 49.0 | 4.74e-01 | 93.0% | 93.8% |
| 3960004 | 2007.5.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase | 0.55 | 37.0 | 4.25e-01 | 96.7% | 90.5% |
| 4975717 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.54 | 34.0 | 4.17e-01 | 99.6% | 97.7% |
| 3501929 | 2003.1.1.4 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.53 | 38.0 | 4.31e-01 | 89.7% | 96.1% |
| 3280335 | 7579.1.1.44 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 | 0.53 | 36.0 | 4.12e-01 | 91.6% | 93.8% |
| 4164604 | 246.2.1.7 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › DNA_pol_E_B | 0.51 | 48.0 | 4.48e-01 | 100.0% | 95.5% |
| 4989986 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.51 | 35.0 | 3.96e-01 | 90.8% | 91.5% |
| 3179508 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.51 | 47.0 | 4.20e-01 | 98.9% | 96.9% |
| 3261865 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.51 | 34.0 | 3.94e-01 | 91.2% | 92.0% |
| 3724762 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.51 | 43.0 | 3.94e-01 | 91.2% | 88.9% |
| 5060484 | 2007.1.5.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like | 0.50 | 28.0 | 3.53e-01 | 91.2% | 89.4% |
D2
medium
residues 1-27_308-363
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF15617.13 best | C-C_Bond_Lyase | 47.9 | 1.50e-12 | 78.3% | 17.8% |
CATH (2)
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3282809 | 2002.1.1.218 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › C-C_Bond_Lyase | 0.80 | 75.0 | 4.65e-01 | 97.6% | 96.4% |
| 3783575 | 109.4.1.447 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PI4K_N | 0.60 | 46.0 | 2.79e-01 | 83.1% | 15.3% |
| 3580816 | 109.4.1.447 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PI4K_N | 0.59 | 43.0 | 3.45e-01 | 79.5% | 41.1% |
| 3744005 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 43.0 | 3.45e-01 | 84.3% | 47.0% |
| 3517340 | 109.4.1.447 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PI4K_N | 0.57 | 43.0 | 2.42e-01 | 81.9% | 7.7% |
| 3624113 | 109.4.1.447 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PI4K_N | 0.56 | 42.0 | 2.52e-01 | 81.9% | 12.1% |
| 3482328 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.56 | 42.0 | 3.92e-01 | 89.2% | 63.8% |
| 3747473 | 109.4.1.447 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PI4K_N | 0.54 | 40.0 | 2.83e-01 | 79.5% | 37.9% |
| 3735848 | 109.4.1.1553 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28151 | 0.54 | 39.0 | 2.23e-01 | 80.7% | 6.8% |
| 3298201 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.54 | 38.0 | 4.10e-01 | 77.1% | 90.0% |
| 4128534 | 109.4.1.447 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PI4K_N | 0.54 | 40.0 | 2.28e-01 | 79.5% | 26.0% |
| 3852156 | 109.4.1.447 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PI4K_N | 0.54 | 39.0 | 2.18e-01 | 79.5% | 15.7% |
| 4381440 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.54 | 40.0 | 3.65e-01 | 89.2% | 58.3% |
| 4025452 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.53 | 40.0 | 3.63e-01 | 89.2% | 58.3% |
| 3228583 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.53 | 40.0 | 3.63e-01 | 89.2% | 58.3% |
| 3808578 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.53 | 38.0 | 3.97e-01 | 90.4% | 85.1% |
| 3267239 | 109.4.1.447 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PI4K_N | 0.53 | 39.0 | 3.06e-01 | 79.5% | 42.6% |
| 3579472 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.53 | 40.0 | 3.48e-01 | 89.2% | 51.5% |
| 60305 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.52 | 39.0 | 3.67e-01 | 89.2% | 63.2% |
| 3271834 | 109.4.1.816 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RALGAPB_N | 0.52 | 39.0 | 2.36e-01 | 84.3% | 17.1% |
| 3550136 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.52 | 39.0 | 3.54e-01 | 89.2% | 58.3% |
| 3712081 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.52 | 38.0 | 3.56e-01 | 89.2% | 60.9% |
| 1000517 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.51 | 39.0 | 3.74e-01 | 86.7% | 69.3% |
| 4181293 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.51 | 38.0 | 3.54e-01 | 89.2% | 60.9% |
| 3733265 | 4075.1.1.2 ↗ | a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 | 0.51 | 35.0 | 3.28e-01 | 71.1% | 99.0% |
| 3637098 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.51 | 38.0 | 3.33e-01 | 89.2% | 50.4% |
| 3406351 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.51 | 38.0 | 3.52e-01 | 89.2% | 60.9% |
| 4956346 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.51 | 41.0 | 2.69e-01 | 90.4% | 69.6% |
| 5035493 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.51 | 37.0 | 3.55e-01 | 89.2% | 63.8% |
| 3394225 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.51 | 38.0 | 3.46e-01 | 89.2% | 58.3% |
| 3593339 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.51 | 37.0 | 3.44e-01 | 89.2% | 58.3% |
| 3586018 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.50 | 37.0 | 3.23e-01 | 89.2% | 47.9% |
| 4112182 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.50 | 37.0 | 3.40e-01 | 89.2% | 56.8% |
| 3413217 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.50 | 37.0 | 3.42e-01 | 89.2% | 58.3% |
| 3594965 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.50 | 39.0 | 3.36e-01 | 88.0% | 50.7% |
| 3935332 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.50 | 37.0 | 3.30e-01 | 89.2% | 51.5% |