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SRR1747018_scaffold_15_prodigal-single.1__X__X__00142
Bact-VirSRR1747018_scaffold_15_prodigal-single.1__X__X__00142
Identity
- Kingdom:
- phage
Quality
66.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-146
Domain cluster:
rep: SRR1747065_scaffold_9_prodigal-single.1__X__X__00193__D3-162
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ci3M02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.67 | 23.0 | 3.63e-01 | 97.2% | 77.6% |
| 3buxB03 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.54 | 30.0 | 3.77e-01 | 91.7% | 90.7% |
| 2wweA01 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.53 | 30.0 | 3.52e-01 | 97.9% | 76.9% |
| 1x6oA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 25.0 | 3.36e-01 | 98.6% | 89.9% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3991896 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.76 | 25.0 | 3.09e-01 | 97.9% | 45.3% |
| 3583296 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.76 | 24.0 | 3.53e-01 | 97.2% | 60.0% |
| 3495496 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 24.0 | 3.21e-01 | 95.9% | 52.5% |
| 4945655 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.71 | 28.0 | 3.42e-01 | 83.4% | 53.0% |
| 3383138 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 28.0 | 3.83e-01 | 98.6% | 69.2% |
| 3631298 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.67 | 22.0 | 3.04e-01 | 97.2% | 53.3% |
| 3942573 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 23.0 | 3.51e-01 | 96.6% | 75.9% |
| 3349450 | 220.1.1.19 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle | 0.64 | 30.0 | 3.27e-01 | 97.9% | 52.5% |
| 4211209 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.61 | 22.0 | 3.14e-01 | 97.2% | 67.7% |
| 3897327 | 2.1.1.241 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rsm22 | 0.59 | 24.0 | 3.64e-01 | 83.4% | 94.5% |
| 3411639 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.57 | 20.0 | 3.27e-01 | 83.4% | 89.8% |
| 3811281 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 26.0 | 3.35e-01 | 71.0% | 78.8% |
| 4594302 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.53 | 25.0 | 2.82e-01 | 70.3% | 57.4% |
| 3542914 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.53 | 30.0 | 3.29e-01 | 97.9% | 66.7% |
| 3971108 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 30.0 | 3.74e-01 | 97.2% | 91.1% |
| 3214705 | 277.1.1.0 ↗ | a+b two layers › PX domain › PX domain › PX domain | 0.52 | 31.0 | 3.43e-01 | 98.6% | 71.7% |
| 4031599 | 101.1.2.584 ↗ | alpha arrays › HTH › HTH › winged helix domain › HrcA | 0.50 | 31.0 | 3.62e-01 | 98.6% | 91.6% |
D2
high
residues 700-829
D3
high
residues 1153-1307
D4
medium
residues 217-284
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fu2A00 | 1.20.1440.50 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like | 0.67 | 47.0 | 4.57e-01 | 75.0% | 70.5% |
| 3iuzA00 | 3.10.180.50 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › | 0.67 | 50.0 | 3.24e-01 | 80.9% | 52.5% |
| 1lp1A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.66 | 44.0 | 4.74e-01 | 75.0% | 85.5% |
| 4ye6A01 | 1.10.8.1290 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1, domain 1 | 0.61 | 40.0 | 3.51e-01 | 77.9% | 44.2% |
| 6zhiB02 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.61 | 46.0 | 4.37e-01 | 83.8% | 89.2% |
| 3crmA02 | 1.10.287.890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain | 0.61 | 42.0 | 3.99e-01 | 73.5% | 82.1% |
| 2qgnA02 | 1.10.287.890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain | 0.60 | 42.0 | 3.99e-01 | 73.5% | 81.7% |
| 6mh4A03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.58 | 40.0 | 3.83e-01 | 72.1% | 67.1% |
| 2oocB00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.58 | 41.0 | 3.63e-01 | 76.5% | 51.4% |
| 1xwjA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.57 | 48.0 | 4.01e-01 | 100.0% | 75.4% |
| 1tizA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.52 | 35.0 | 3.59e-01 | 72.1% | 79.1% |
| 2qm8A03 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.51 | 35.0 | 3.56e-01 | 70.6% | 75.4% |
| 1konA01 | 1.10.10.200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain | 0.50 | 43.0 | 4.33e-01 | 98.5% | 100.0% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3610578 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.74 | 55.0 | 4.26e-01 | 79.4% | 64.8% |
| 4452686 | 160.1.1.1 ↗ | alpha superhelices › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › ATP-synt_ab_C | 0.74 | 53.0 | 4.01e-01 | 75.0% | 83.3% |
| 3700727 | 601.29.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › TM1646-like › TM1646-like | 0.73 | 54.0 | 4.33e-01 | 79.4% | 69.6% |
| 3420431 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.71 | 54.0 | 5.04e-01 | 82.4% | 81.2% |
| 3553221 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.70 | 55.0 | 4.56e-01 | 85.3% | 72.5% |
| 4095048 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.69 | 54.0 | 4.50e-01 | 85.3% | 72.5% |
| 4971143 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.67 | 51.0 | 4.81e-01 | 85.3% | 98.8% |
| 4015612 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.64 | 47.0 | 4.39e-01 | 79.4% | 70.6% |
| 3424514 | 606.1.1.0 ↗ | alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain | 0.61 | 43.0 | 3.63e-01 | 75.0% | 77.5% |
| 5026634 | 4957.1.1.0 ↗ | a+b complex topology › helical domain in yeast RNA-polymerases › third helical domain in yeast RNA-polymerase II beta-prime subunit › third helical domain in yeast RNA-polymerase II beta-prime subunit | 0.58 | 41.0 | 3.83e-01 | 77.9% | 57.8% |
| 3175234 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.55 | 37.0 | 3.43e-01 | 72.1% | 78.9% |
| 3926794 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.54 | 39.0 | 4.06e-01 | 79.4% | 82.8% |
| 5032334 | 601.3.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain | 0.53 | 38.0 | 3.56e-01 | 77.9% | 62.2% |
| 3406013 | 509.1.1.0 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain | 0.53 | 36.0 | 3.48e-01 | 72.1% | 70.0% |
| 3652955 | 108.1.1.28 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 | 0.52 | 41.0 | 3.51e-01 | 92.6% | 75.2% |
| 3598690 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.51 | 39.0 | 3.60e-01 | 88.2% | 95.8% |
D5
medium
residues 378-573
Domain cluster:
rep: IMGVR_UViG_3300035054_001240-3300035054-Ga0371493_0004308_1467_3980__D275-446
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13306.13 best | LRR_5 | 63.9 | 2.00e-17 | 63.8% | 83.5% |
| PF13306.13 | LRR_5 | 65.4 | 6.90e-18 | 51.5% | 77.2% |
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fs7A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.91 | 89.0 | 6.83e-01 | 100.0% | 52.2% |
| 4ojuA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.91 | 63.0 | 7.45e-01 | 70.4% | 96.5% |
| 4cp6A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.89 | 85.0 | 6.49e-01 | 100.0% | 62.7% |
| 4gt6A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.83 | 79.0 | 6.19e-01 | 100.0% | 62.3% |
| 4fd0A02 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.82 | 80.0 | 6.70e-01 | 100.0% | 65.9% |
| 4h09D00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.81 | 76.0 | 5.89e-01 | 96.9% | 53.6% |
| 3sb4A02 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.77 | 59.0 | 6.68e-01 | 78.1% | 100.0% |
| 1xwdC00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.72 | 66.0 | 6.15e-01 | 98.5% | 82.6% |
| 4bv4R00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.71 | 66.0 | 5.00e-01 | 100.0% | 54.1% |
| 1oznA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.70 | 65.0 | 5.66e-01 | 99.0% | 71.1% |
| 4bsrB01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.70 | 65.0 | 4.85e-01 | 99.0% | 44.3% |
| 4fcgA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.69 | 64.0 | 5.53e-01 | 100.0% | 72.6% |
| 4tzhA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.68 | 57.0 | 5.85e-01 | 98.5% | 91.6% |
| 4u7lA01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.68 | 63.0 | 5.28e-01 | 99.0% | 70.2% |
| 3bz5A01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.68 | 63.0 | 5.08e-01 | 100.0% | 54.3% |
| 1ogqA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.68 | 63.0 | 5.35e-01 | 100.0% | 72.2% |
| 1ziwA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.68 | 63.0 | 4.34e-01 | 99.5% | 38.0% |
| 4ezgA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.67 | 56.0 | 5.83e-01 | 96.9% | 94.6% |
| 4rcaB00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.67 | 61.0 | 5.74e-01 | 100.0% | 98.8% |
| 2v9sA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.66 | 58.0 | 5.73e-01 | 91.8% | 89.9% |
| 1gwbA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.66 | 61.0 | 5.53e-01 | 100.0% | 78.5% |
| 1xkuA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.64 | 59.0 | 5.08e-01 | 99.0% | 64.6% |
| 3wpcA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.64 | 60.0 | 3.99e-01 | 100.0% | 31.2% |
| 4v2dA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.64 | 59.0 | 5.01e-01 | 99.5% | 69.0% |
| 4rcwA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.64 | 56.0 | 5.28e-01 | 92.9% | 82.1% |
| 2z66A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.64 | 59.0 | 5.08e-01 | 100.0% | 74.2% |
| 2xotB01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.64 | 58.0 | 5.40e-01 | 100.0% | 78.5% |
| 4cnmA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.63 | 58.0 | 5.14e-01 | 99.5% | 81.6% |
| 2id5A01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.63 | 58.0 | 4.71e-01 | 100.0% | 56.0% |
| 2z80B00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.63 | 58.0 | 4.89e-01 | 99.0% | 62.2% |
| 3zyiA01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.63 | 58.0 | 4.99e-01 | 100.0% | 78.9% |
| 1w8aA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.63 | 55.0 | 5.65e-01 | 92.9% | 96.3% |
| 3sb4A01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.61 | 50.0 | 5.27e-01 | 84.2% | 96.0% |
| 2wfhA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.61 | 53.0 | 5.54e-01 | 92.9% | 99.4% |
| 4lxrA02 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.60 | 50.0 | 5.21e-01 | 100.0% | 96.0% |
| 1wwlB00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.60 | 54.0 | 4.63e-01 | 98.0% | 77.9% |
| 4xsqB00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.59 | 49.0 | 5.15e-01 | 92.3% | 96.1% |
| 4w8qA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.58 | 53.0 | 5.04e-01 | 99.0% | 96.6% |
| 4im6A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.55 | 49.0 | 4.92e-01 | 96.9% | 97.0% |
ECOD (94)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5033803 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.93 | 90.0 | 8.60e-01 | 100.0% | 88.2% |
| 2576217 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.92 | 87.0 | 8.44e-01 | 98.5% | 89.3% |
| 1281087 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.91 | 89.0 | 6.83e-01 | 100.0% | 52.2% |
| 1297113 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.91 | 63.0 | 7.44e-01 | 70.9% | 96.5% |
| 1281127 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.90 | 72.0 | 7.82e-01 | 82.7% | 97.0% |
| 1501314 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.89 | 85.0 | 6.49e-01 | 100.0% | 62.7% |
| 1600195 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.83 | 80.0 | 7.84e-01 | 100.0% | 95.7% |
| 4148563 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.82 | 79.0 | 5.72e-01 | 99.5% | 46.5% |
| 1295939 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.81 | 76.0 | 5.89e-01 | 96.9% | 53.6% |
| 3580583 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.72 | 67.0 | 6.29e-01 | 99.0% | 87.2% |
| 3870350 | 207.1.1.132 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_6, LRR_8 | 0.71 | 60.0 | 5.52e-01 | 94.4% | 70.6% |
| 3436132 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.71 | 66.0 | 5.50e-01 | 100.0% | 75.5% |
| None | — | 0.71 | 66.0 | 4.79e-01 | 100.0% | 44.8% | |
| 3773154 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.71 | 62.0 | 5.67e-01 | 98.5% | 71.8% |
| 4048660 | 207.1.1.142 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_6, LRR_8 | 0.71 | 61.0 | 6.13e-01 | 97.4% | 90.0% |
| 3298276 | 207.1.1.174 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_3 | 0.70 | 66.0 | 5.08e-01 | 100.0% | 55.9% |
| None | — | 0.70 | 65.0 | 6.06e-01 | 100.0% | 81.6% | |
| 4577126 | 207.1.1.132 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_6, LRR_8 | 0.70 | 62.0 | 5.68e-01 | 98.5% | 73.2% |
| 3413809 | 207.1.1.141 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5, LRR_8 | 0.70 | 65.0 | 5.09e-01 | 99.5% | 57.3% |
| 3765539 | 207.1.1.24 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 | 0.70 | 61.0 | 5.63e-01 | 91.8% | 86.9% |
| 3229964 | 207.1.1.139 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_6, LRR_8 | 0.70 | 65.0 | 4.79e-01 | 99.0% | 47.2% |
| 3843308 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.70 | 64.0 | 4.59e-01 | 99.0% | 36.9% |
| 3444744 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.69 | 57.0 | 5.71e-01 | 95.9% | 84.0% |
| 3893202 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.69 | 64.0 | 4.98e-01 | 100.0% | 55.7% |
| 3908970 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.69 | 64.0 | 5.02e-01 | 100.0% | 56.0% |
| 5018050 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.69 | 64.0 | 5.25e-01 | 100.0% | 66.8% |
| 3993124 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.69 | 64.0 | 4.81e-01 | 100.0% | 55.2% |
| 3502671 | 207.1.1.132 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_6, LRR_8 | 0.69 | 63.0 | 5.90e-01 | 99.0% | 83.7% |
| 3517266 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.68 | 63.0 | 4.67e-01 | 99.0% | 42.7% |
| None | — | 0.68 | 62.0 | 4.75e-01 | 95.4% | 52.0% | |
| 3342514 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.68 | 63.0 | 5.45e-01 | 98.0% | 75.9% |
| 3487196 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.68 | 51.0 | 4.91e-01 | 98.0% | 67.4% |
| 3414286 | 207.1.1.139 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_6, LRR_8 | 0.68 | 63.0 | 3.97e-01 | 100.0% | 20.4% |
| 3565599 | 207.1.1.164 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRRNT, LRRCT, LRR_8 | 0.68 | 62.0 | 5.50e-01 | 100.0% | 68.9% |
| 3897809 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.68 | 61.0 | 5.58e-01 | 94.9% | 86.4% |
| 3703664 | 207.1.1.245 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6, LRR_At5g56370, DUF7885 | 0.68 | 63.0 | 5.85e-01 | 100.0% | 83.3% |
| None | — | 0.68 | 63.0 | 4.77e-01 | 100.0% | 52.7% | |
| 3700941 | 207.1.1.134 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6, DUF7885 | 0.68 | 63.0 | 4.84e-01 | 100.0% | 53.6% |
| 3865160 | 207.1.1.140 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRRNT, LRR_8 | 0.68 | 62.0 | 4.97e-01 | 99.0% | 53.2% |
| 3622173 | 207.1.1.139 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_6, LRR_8 | 0.67 | 62.0 | 5.82e-01 | 99.5% | 96.2% |
| 3887151 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.67 | 62.0 | 5.39e-01 | 100.0% | 76.0% |
| 3910546 | 207.1.1.139 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_6, LRR_8 | 0.67 | 62.0 | 5.30e-01 | 100.0% | 63.8% |
| 4868010 | 207.1.1.24 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 | 0.67 | 63.0 | 4.31e-01 | 100.0% | 32.1% |
| 3501488 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.67 | 62.0 | 4.53e-01 | 100.0% | 44.7% |
| 3533108 | 207.1.1.24 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 | 0.67 | 60.0 | 5.52e-01 | 93.4% | 78.8% |
| 3772387 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.67 | 62.0 | 4.59e-01 | 100.0% | 47.6% |
| 3886398 | 207.1.1.140 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRRNT, LRR_8 | 0.67 | 50.0 | 5.39e-01 | 78.1% | 88.2% |
| 3565946 | 207.1.1.24 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 | 0.67 | 62.0 | 5.01e-01 | 100.0% | 64.9% |
| 1397878 | 207.1.1.165 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRRNT, LRR_4, LRR_8 | 0.67 | 62.0 | 5.36e-01 | 100.0% | 78.4% |
| 4945606 | 207.1.1.24 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 | 0.67 | 62.0 | 4.97e-01 | 100.0% | 61.1% |
| 3900768 | 207.1.1.150 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRRNT, LRR_5, LRR_8 | 0.67 | 62.0 | 4.80e-01 | 99.0% | 49.9% |
| 3402205 | 207.1.1.139 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_6, LRR_8 | 0.67 | 62.0 | 5.27e-01 | 100.0% | 72.3% |
| 3231578 | 207.1.1.425 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_4, LRR_5, LRR_8 | 0.67 | 62.0 | 4.34e-01 | 100.0% | 40.2% |
| 3245512 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.66 | 61.0 | 4.48e-01 | 100.0% | 39.0% |
| 3238030 | 207.1.1.201 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_8, LRR_9 | 0.66 | 61.0 | 4.30e-01 | 99.5% | 36.5% |
| 3391270 | 207.1.1.139 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_6, LRR_8 | 0.66 | 61.0 | 4.59e-01 | 100.0% | 49.3% |
| 3990384 | 207.1.1.137 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_8 | 0.66 | 61.0 | 4.52e-01 | 100.0% | 47.2% |
| 3214172 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.66 | 59.0 | 5.70e-01 | 93.9% | 96.3% |
| 3523647 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.66 | 61.0 | 5.42e-01 | 98.5% | 74.1% |
| 3901019 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.66 | 61.0 | 4.71e-01 | 100.0% | 59.3% |
| 3844168 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.66 | 59.0 | 5.50e-01 | 99.0% | 78.7% |
| 3851397 | 207.1.1.176 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_5, LRR_8 | 0.66 | 61.0 | 5.05e-01 | 100.0% | 71.0% |
| 3412767 | 207.1.1.24 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 | 0.65 | 60.0 | 5.22e-01 | 100.0% | 78.0% |
| 3893295 | 207.1.1.137 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_8 | 0.65 | 61.0 | 5.95e-01 | 100.0% | 93.3% |
| 3748109 | 207.1.1.150 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRRNT, LRR_5, LRR_8 | 0.65 | 60.0 | 5.21e-01 | 99.0% | 68.1% |
| 3592520 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.65 | 60.0 | 4.98e-01 | 100.0% | 64.9% |
| 3752030 | 207.1.1.139 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_6, LRR_8 | 0.65 | 60.0 | 5.01e-01 | 100.0% | 69.6% |
| 3176991 | 207.1.1.189 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_6, LRR_9 | 0.65 | 60.0 | 5.07e-01 | 100.0% | 65.9% |
| 3841570 | 207.1.1.186 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_6, LRR_8, LRR_14 | 0.65 | 60.0 | 4.74e-01 | 100.0% | 57.0% |
| 3622341 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.65 | 60.0 | 4.43e-01 | 99.0% | 47.0% |
| 4450783 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.65 | 60.0 | 5.79e-01 | 99.0% | 98.6% |
| 3909049 | 207.1.1.141 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5, LRR_8 | 0.64 | 55.0 | 5.20e-01 | 90.3% | 80.0% |
| 3472301 | 207.1.1.24 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 | 0.64 | 59.0 | 5.30e-01 | 99.5% | 81.9% |
| 3914912 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.64 | 53.0 | 5.17e-01 | 87.8% | 79.1% |
| 3753491 | 207.1.1.140 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRRNT, LRR_8 | 0.64 | 59.0 | 5.51e-01 | 100.0% | 83.3% |
| 3754407 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.64 | 56.0 | 5.36e-01 | 92.9% | 86.7% |
| 3851247 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.64 | 59.0 | 4.72e-01 | 100.0% | 61.6% |
| 4296316 | 207.1.1.196 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRRNT, LRR_6, LRR_8 | 0.64 | 59.0 | 5.03e-01 | 99.0% | 63.2% |
| 327474 | 207.1.1.140 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRRNT, LRR_8 | 0.64 | 59.0 | 5.08e-01 | 100.0% | 74.2% |
| 3889084 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.64 | 59.0 | 4.87e-01 | 100.0% | 69.6% |
| 3863288 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.64 | 59.0 | 4.37e-01 | 100.0% | 62.8% |
| None | — | 0.64 | 59.0 | 4.76e-01 | 100.0% | 58.4% | |
| 3360863 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.64 | 59.0 | 4.68e-01 | 100.0% | 57.2% |
| 3869060 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.63 | 59.0 | 4.55e-01 | 100.0% | 49.5% |
| 3905532 | 207.1.1.63 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6,LRR_8 | 0.63 | 54.0 | 5.36e-01 | 91.8% | 88.0% |
| 3348676 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.63 | 57.0 | 4.63e-01 | 99.5% | 75.7% |
| 3840153 | 207.1.1.181 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_8, LRR_12 | 0.62 | 57.0 | 4.48e-01 | 100.0% | 71.3% |
| 3511045 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.62 | 56.0 | 4.44e-01 | 100.0% | 58.1% |
| 3915951 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.61 | 56.0 | 5.32e-01 | 99.5% | 86.8% |
| 3881680 | 207.1.1.175 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRRCT, LRR_8 | 0.61 | 53.0 | 5.30e-01 | 92.3% | 90.5% |
| 4001314 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.60 | 55.0 | 5.02e-01 | 100.0% | 81.1% |
| 3869862 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.60 | 55.0 | 5.38e-01 | 100.0% | 93.5% |
| 3316459 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.59 | 54.0 | 4.54e-01 | 98.5% | 60.6% |
| 3779743 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.51 | 47.0 | 4.57e-01 | 100.0% | 96.3% |
D6
medium
residues 574-681
Domain cluster:
rep: SRR1747065_scaffold_9_prodigal-single.1__X__X__00024__D551-697
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13306.13 best | LRR_5 | 36.7 | 5.10e-09 | 76.8% | 67.7% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gt6A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.75 | 66.0 | 4.38e-01 | 93.5% | 26.4% |
| 4cp6A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.74 | 66.0 | 4.30e-01 | 93.5% | 25.9% |
| 4ojuA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.70 | 64.0 | 5.80e-01 | 98.1% | 75.4% |
| 3sb4A01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.68 | 62.0 | 5.26e-01 | 100.0% | 74.4% |
| 4fs7A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.67 | 62.0 | 4.16e-01 | 100.0% | 31.1% |
| 4h09D00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.66 | 62.0 | 4.15e-01 | 100.0% | 31.3% |
| 3phhA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 45.0 | 4.20e-01 | 99.1% | 69.2% |
| 6ejiA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.53 | 47.0 | 3.97e-01 | 98.1% | 86.5% |
| 2y0eB03 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 40.0 | 3.20e-01 | 80.6% | 60.7% |
| 3a21B01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 46.0 | 3.41e-01 | 100.0% | 57.3% |
| 4oxiA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.50 | 45.0 | 3.06e-01 | 100.0% | 94.3% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3251672 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.73 | 60.0 | 5.88e-01 | 98.1% | 82.5% |
| 3260493 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.67 | 61.0 | 3.84e-01 | 100.0% | 22.2% |
| 3305841 | 207.1.1.134 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6, DUF7885 | 0.65 | 59.0 | 4.25e-01 | 99.1% | 35.9% |
| 3443408 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.65 | 59.0 | 5.30e-01 | 100.0% | 78.7% |
| 3264122 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.64 | 59.0 | 3.60e-01 | 100.0% | 26.1% |
| 3784898 | 207.1.1.45 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_4,LRR_8 | 0.64 | 55.0 | 3.63e-01 | 99.1% | 21.9% |
| 3649634 | 207.1.1.95 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 | 0.63 | 56.0 | 3.98e-01 | 100.0% | 32.5% |
| 3456751 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.62 | 57.0 | 4.00e-01 | 100.0% | 38.5% |
| 3670817 | 207.1.1.95 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 | 0.62 | 56.0 | 3.71e-01 | 100.0% | 36.3% |
| 4937009 | 2007.6.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain | 0.59 | 42.0 | 3.81e-01 | 99.1% | 54.5% |
| 4985193 | 2003.1.12.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C | 0.56 | 42.0 | 3.91e-01 | 78.7% | 85.9% |
| 4976462 | 2487.1.1.0 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" | 0.55 | 41.0 | 4.39e-01 | 77.8% | 100.0% |
| 4402217 | 2002.1.1.291 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TIM-barrel_MTC6 | 0.55 | 48.0 | 3.68e-01 | 98.1% | 68.1% |
| 4160870 | 2002.3.1.4 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › LamB_YcsF | 0.55 | 49.0 | 3.77e-01 | 100.0% | 73.2% |
| 4998808 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.54 | 48.0 | 3.93e-01 | 99.1% | 84.9% |
| 3953035 | 2003.1.12.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › UDPG_MGDP_dh_C | 0.53 | 40.0 | 3.72e-01 | 100.0% | 60.8% |
| 3386586 | 2007.6.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › PGI | 0.52 | 40.0 | 3.23e-01 | 79.6% | 60.0% |
| 4998268 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.52 | 45.0 | 3.77e-01 | 98.1% | 88.7% |
D7
medium
residues 979-1054_1104-1116
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wmoA01 | 1.25.40.410 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › DOCK DHR2 domain, lobe A | 0.66 | 46.0 | 4.01e-01 | 73.0% | 84.3% |
| 3jrtA00 | 1.20.120.1060 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.58 | 49.0 | 4.06e-01 | 94.4% | 79.5% |
| 1wj5A01 | 1.10.10.980 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › CST, Suppressor of Cdc13 homolog, complex subunit STN1, N-terminal domain | 0.55 | 44.0 | 4.32e-01 | 91.0% | 79.6% |
| 7kypB01 | 1.10.3470.10 | Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC | 0.53 | 44.0 | 3.14e-01 | 93.3% | 71.5% |
| 4htpB00 | 1.10.3260.10 | Mainly Alpha › Orthogonal Bundle › DNA ligase i, domain 1 › DNA ligase, ATP-dependent, N-terminal domain | 0.52 | 44.0 | 3.31e-01 | 92.1% | 91.0% |
| 1m4rB00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.52 | 42.0 | 3.64e-01 | 87.6% | 88.7% |
| 4asvA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.52 | 35.0 | 3.76e-01 | 93.3% | 79.7% |
| 1sz7A00 | 3.30.1380.20 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 | 0.51 | 45.0 | 3.71e-01 | 96.6% | 91.8% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.50 | 41.0 | 3.94e-01 | 86.5% | 85.3% |
| 1zs3A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.50 | 38.0 | 3.09e-01 | 94.4% | 42.1% |
| 4d3zA02 | 1.10.132.130 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.50 | 39.0 | 3.68e-01 | 86.5% | 68.2% |
| 1e2aA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.50 | 42.0 | 4.01e-01 | 88.8% | 85.3% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4026045 | 101.1.4.85 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3, PF28877 | 0.62 | 28.0 | 3.32e-01 | 79.8% | 60.0% |
| 3255250 | 109.24.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Helical domain in dedicator of cytokinesis protein 9 › Helical domain in dedicator of cytokinesis protein 9 › DHR-2_Lobe_A | 0.59 | 47.0 | 3.83e-01 | 85.4% | 70.0% |
| 5041402 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 36.0 | 4.03e-01 | 86.5% | 87.7% |
| 3518519 | 101.1.17.18 ↗ | alpha arrays › HTH › HTH › FF domain › FF_PRPF40A | 0.56 | 36.0 | 4.28e-01 | 84.3% | 96.7% |
| 3499410 | 109.4.1.816 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RALGAPB_N | 0.55 | 42.0 | 2.76e-01 | 84.3% | 75.4% |
| 5053357 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.53 | 36.0 | 3.03e-01 | 73.0% | 40.7% |
| 3203026 | 3640.1.1.8 ↗ | alpha duplicates or obligate multimers › Minor ampullate fibroin 1 C-terminal domain › Minor ampullate fibroin 1 C-terminal domain › Minor ampullate fibroin 1 C-terminal domain › Tri-helical | 0.53 | 43.0 | 4.29e-01 | 89.9% | 86.3% |
| 3241490 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.53 | 38.0 | 3.56e-01 | 75.3% | 64.5% |
| 2589759 | 4064.1.1.2 ↗ | a+b complex topology › Inner layer core protein p3-related › Inner layer core protein p3-related › Inner layer core protein p3-related › Rota_VP2 | 0.51 | 44.0 | 2.59e-01 | 98.9% | 68.1% |
| 4963655 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.50 | 39.0 | 3.22e-01 | 82.0% | 92.3% |