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SRR1747018_scaffold_15_prodigal-single.1XX__00177

Bact-Vir

SRR1747018_scaffold_15_prodigal-single.1__X__X__00177

Identity

Kingdom:: phage

Quality

94.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-70

PDB

Domain cluster: representative

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4iajA00	3.30.1490.390	Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Protein of unknown function DUF4649	0.80	73.0	6.94e-01	100.0%	89.5%
2jvfA00	3.30.1710.10	Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein	0.65	49.0	4.38e-01	81.8%	94.7%
2l6oA01	2.40.10.320	Mainly Beta › Beta Barrel › Thrombin, subunit H › Uncharacterised protein PF13642 yp_926445, N-terminal domain	0.65	48.0	4.76e-01	93.9%	75.0%
1qysA00	3.30.1710.10	Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein	0.65	48.0	4.39e-01	81.8%	96.7%
2qqrA02	3.10.330.70	Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 ›	0.59	33.0	3.66e-01	89.4%	67.9%
4kyzA00	3.30.70.600	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10	0.55	48.0	3.61e-01	100.0%	82.6%
2n17A00	3.30.60.30	Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 ›	0.53	35.0	3.75e-01	87.9%	80.4%
4cbvA02	2.40.50.1020	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain	0.53	38.0	3.21e-01	100.0%	44.1%
2qsdA01	3.10.20.10	Alpha Beta › Roll › Ubiquitin-like (UB roll) ›	0.53	40.0	3.99e-01	86.4%	94.0%
4p5nA00	2.30.30.1060	Mainly Beta › Roll › SH3 type barrels. ›	0.52	36.0	3.52e-01	74.2%	81.1%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
224066	822.3.1.1 ↗	a+b two layers › GYF/BRK domain-like › conserved domain protein SP_1775 › conserved domain protein SP_1775 › DUF4649	0.80	73.0	6.90e-01	100.0%	88.3%
3987692	822.3.1.1 ↗	a+b two layers › GYF/BRK domain-like › conserved domain protein SP_1775 › conserved domain protein SP_1775 › DUF4649	0.78	69.0	6.86e-01	100.0%	95.7%
3590261	822.3.1.1 ↗	a+b two layers › GYF/BRK domain-like › conserved domain protein SP_1775 › conserved domain protein SP_1775 › DUF4649	0.78	68.0	6.78e-01	97.0%	98.5%
4963	4012.1.1.1 ↗	a+b two layers › SSHS domain › SSHS domain in type II DNA topoisomerase › SSHS domain in type II DNA topoisomerase › TOPRIM_C	0.59	37.0	4.26e-01	71.2%	95.3%
3612075	2004.1.1.0 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases	0.56	42.0	3.05e-01	84.8%	32.9%
379802	822.1.1.1 ↗	a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF	0.55	46.0	4.34e-01	100.0%	87.2%
4485646	4186.1.1.1 ↗	beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p	0.54	44.0	4.11e-01	92.4%	100.0%
3258276	4081.1.1.2 ↗	beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT	0.53	39.0	2.75e-01	80.3%	40.0%
3898182	2485.1.1.69 ↗	a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › DUF4174	0.53	46.0	3.67e-01	100.0%	84.3%
3580124	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.53	27.0	3.07e-01	100.0%	66.0%
4313846	4186.1.1.1 ↗	beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p	0.53	44.0	3.78e-01	92.4%	100.0%
3416144	1.1.17.0 ↗	beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2	0.52	45.0	3.23e-01	100.0%	35.2%
5059796	4326.1.1.0 ↗	a+b two layers › ERH-like › ERH-like › ERH-like	0.50	39.0	3.95e-01	100.0%	87.0%