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SRR1747018_scaffold_15_prodigal-single.1__X__X__00286
Bact-VirSRR1747018_scaffold_15_prodigal-single.1__X__X__00286
Identity
- Kingdom:
- phage
Quality
87.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-211
Domain cluster:
rep: IMGVR_UViG_2799112911_000001-2799112911-2800876478__D20-194
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3mduA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.66 | 55.0 | 4.60e-01 | 87.0% | 93.9% |
| 1ta3A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.65 | 52.0 | 4.73e-01 | 83.2% | 73.7% |
| 3hv2A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.64 | 41.0 | 5.02e-01 | 75.5% | 97.1% |
| 3kcnB00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.64 | 40.0 | 4.84e-01 | 88.9% | 94.2% |
| 2rjnA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.64 | 41.0 | 5.05e-01 | 76.4% | 99.3% |
| 4dadA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 38.0 | 4.71e-01 | 88.5% | 96.9% |
| 2oktA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.62 | 52.0 | 5.22e-01 | 100.0% | 87.4% |
| 1kcxA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.61 | 57.0 | 4.66e-01 | 100.0% | 96.2% |
| 3g23A02 | 3.50.30.60 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › LD-carboxypeptidase A C-terminal domain-like | 0.61 | 32.0 | 4.31e-01 | 76.4% | 97.1% |
| 4ov4A01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.61 | 57.0 | 5.12e-01 | 100.0% | 82.4% |
| 7xjrA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.61 | 57.0 | 5.07e-01 | 100.0% | 84.7% |
| 3fndA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.61 | 56.0 | 5.12e-01 | 97.6% | 83.9% |
| 1sfjB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.60 | 56.0 | 5.44e-01 | 100.0% | 88.8% |
| 3eegB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.60 | 56.0 | 5.10e-01 | 100.0% | 97.1% |
| 3bleA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.60 | 56.0 | 4.89e-01 | 100.0% | 87.3% |
| 1p0kA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 55.0 | 4.81e-01 | 100.0% | 67.3% |
| 1gkpA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.59 | 55.0 | 4.57e-01 | 100.0% | 96.1% |
| 1gteB05 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 55.0 | 4.82e-01 | 100.0% | 88.9% |
| 2vtfA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.59 | 53.0 | 4.43e-01 | 96.2% | 96.0% |
| 1qwgA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 55.0 | 5.13e-01 | 100.0% | 85.7% |
| 4v1xA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.58 | 54.0 | 4.50e-01 | 100.0% | 94.4% |
| 4by3A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.58 | 54.0 | 4.46e-01 | 100.0% | 83.1% |
| 3wqcA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.58 | 52.0 | 5.13e-01 | 100.0% | 89.2% |
| 2o7sA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 53.0 | 5.13e-01 | 100.0% | 87.1% |
| 2q02A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.58 | 53.0 | 4.89e-01 | 100.0% | 89.0% |
| 1knxA01 | 3.40.1390.20 | Alpha Beta › 3-Layer(aba) Sandwich › Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1 › HprK N-terminal domain-like | 0.58 | 30.0 | 3.68e-01 | 93.3% | 76.7% |
| 1tvnA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.56 | 51.0 | 4.54e-01 | 97.6% | 79.9% |
| 3e74A02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.56 | 52.0 | 4.44e-01 | 100.0% | 95.7% |
| 3sr7A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 47.0 | 4.30e-01 | 100.0% | 67.4% |
| 1geqB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 51.0 | 4.79e-01 | 96.6% | 85.3% |
| 3pztB00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.56 | 50.0 | 4.40e-01 | 96.6% | 66.9% |
| 8inpA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.55 | 45.0 | 4.32e-01 | 86.1% | 88.0% |
| 7x2pA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 44.0 | 4.45e-01 | 85.6% | 100.0% |
| 4gbmA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 44.0 | 3.96e-01 | 86.1% | 71.7% |
| 6pznB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 43.0 | 4.15e-01 | 87.5% | 86.7% |
| 5di3B00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 42.0 | 4.28e-01 | 89.9% | 86.8% |
| 3wi7A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 43.0 | 3.82e-01 | 87.0% | 98.6% |
| 4ywrA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 45.0 | 4.41e-01 | 96.2% | 98.7% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3271617 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.69 | 58.0 | 5.01e-01 | 88.9% | 94.3% |
| 4944334 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.64 | 55.0 | 4.77e-01 | 89.9% | 89.0% |
| 4479648 | 2493.1.1.2 ↗ | a/b three-layered sandwiches › MurF and HprK N-domain-like › MurF and HprK N-domain-like › MurF and HprK N-domain-like › Hpr_kinase_N | 0.63 | 33.0 | 4.01e-01 | 93.8% | 76.3% |
| 3580801 | 2007.9.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain | 0.63 | 38.0 | 4.54e-01 | 84.1% | 86.9% |
| 4204245 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.62 | 58.0 | 4.40e-01 | 100.0% | 59.2% |
| 3171546 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.62 | 58.0 | 4.47e-01 | 100.0% | 62.7% |
| 3957203 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.62 | 58.0 | 5.16e-01 | 100.0% | 84.0% |
| 4104846 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.62 | 58.0 | 4.50e-01 | 100.0% | 64.4% |
| 4033655 | 2002.1.1.25 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like | 0.62 | 58.0 | 5.24e-01 | 100.0% | 93.2% |
| 4030834 | 2002.1.1.28 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PRAI | 0.62 | 51.0 | 5.14e-01 | 96.6% | 85.9% |
| 3169971 | 2002.1.1.355 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PF28394 | 0.62 | 58.0 | 4.38e-01 | 100.0% | 69.9% |
| 4103299 | 2004.1.1.141 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CTP_synth_N | 0.62 | 52.0 | 4.73e-01 | 89.4% | 88.2% |
| 4889520 | 2002.1.1.320 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Fas1-AflB-like_hel, DNA_pol_B_N | 0.62 | 53.0 | 4.41e-01 | 90.9% | 79.3% |
| 5064933 | 2004.1.1.141 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CTP_synth_N | 0.61 | 54.0 | 5.45e-01 | 92.8% | 99.5% |
| 3635690 | 2002.1.1.275 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, DHOase | 0.61 | 57.0 | 4.45e-01 | 100.0% | 87.8% |
| 4134935 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.61 | 57.0 | 4.59e-01 | 99.0% | 61.6% |
| 1346827 | 2002.1.1.25 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like | 0.61 | 57.0 | 5.11e-01 | 100.0% | 81.8% |
| None | — | 0.61 | 57.0 | 4.65e-01 | 100.0% | 72.7% | |
| 4251437 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.61 | 57.0 | 4.58e-01 | 99.0% | 61.1% |
| 3786053 | 2002.1.1.275 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, DHOase | 0.61 | 56.0 | 4.34e-01 | 100.0% | 89.8% |
| 4948214 | 2004.1.1.141 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CTP_synth_N | 0.61 | 55.0 | 4.85e-01 | 96.2% | 91.5% |
| 3233177 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.61 | 52.0 | 3.53e-01 | 90.4% | 33.1% |
| 3831850 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.61 | 56.0 | 4.25e-01 | 100.0% | 57.3% |
| None | — | 0.61 | 56.0 | 4.29e-01 | 100.0% | 59.8% | |
| 4997245 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.60 | 56.0 | 4.47e-01 | 100.0% | 54.3% |
| 4167763 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.60 | 55.0 | 4.47e-01 | 100.0% | 71.6% |
| 4010349 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.60 | 53.0 | 4.25e-01 | 96.2% | 79.3% |
| 4947698 | 2004.1.1.86 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › FeoB_N | 0.59 | 41.0 | 4.52e-01 | 86.5% | 87.3% |
| 3667699 | 2007.9.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain | 0.59 | 40.0 | 4.60e-01 | 72.1% | 93.3% |
| 3835138 | 2002.1.1.66 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHquinase_I | 0.58 | 53.0 | 5.01e-01 | 100.0% | 81.2% |
| 5051054 | 2002.1.1.77 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › RNase_P_p30 | 0.58 | 49.0 | 4.70e-01 | 88.9% | 81.7% |
| 3411950 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.58 | 53.0 | 4.93e-01 | 100.0% | 79.2% |
| 4054432 | 2002.1.1.48 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › FMN_dh | 0.58 | 54.0 | 4.62e-01 | 100.0% | 68.4% |
| 5079342 | 2002.1.1.134 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_2 | 0.58 | 52.0 | 4.99e-01 | 100.0% | 85.1% |
| 5082134 | 2002.1.1.43 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › His_biosynth | 0.58 | 54.0 | 5.31e-01 | 99.5% | 95.5% |
| 5004837 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.58 | 53.0 | 4.80e-01 | 98.1% | 96.7% |
| 3341078 | 2002.1.1.66 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHquinase_I | 0.57 | 43.0 | 4.71e-01 | 97.6% | 94.7% |
| 5024528 | 2002.1.1.174 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C | 0.57 | 51.0 | 4.58e-01 | 95.2% | 75.8% |
| 3352153 | 2002.1.2.3 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › Hypothetical protein Cthe_0052 › HMGL-like | 0.57 | 42.0 | 4.66e-01 | 82.7% | 92.9% |
| 5075507 | 2002.1.1.70 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glu_synthase | 0.56 | 51.0 | 4.64e-01 | 96.6% | 77.1% |
| 4988215 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.56 | 46.0 | 4.81e-01 | 86.1% | 99.5% |
| 4990088 | 2002.1.1.15 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA | 0.56 | 51.0 | 4.82e-01 | 96.6% | 82.4% |
| 2808316 | 2004.1.1.122 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › IIGP | 0.56 | 45.0 | 3.76e-01 | 85.6% | 59.7% |
| 4973516 | 2007.2.1.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_4 | 0.55 | 39.0 | 4.37e-01 | 71.2% | 100.0% |
| 4410436 | 2002.3.1.2 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 | 0.55 | 42.0 | 4.27e-01 | 86.5% | 79.5% |
| 4957733 | 2007.2.1.14 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_3 | 0.55 | 39.0 | 4.28e-01 | 71.6% | 99.4% |
| 4975481 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 42.0 | 4.39e-01 | 81.2% | 90.8% |
| 5021396 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.54 | 44.0 | 4.34e-01 | 87.0% | 88.3% |
| 4931421 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.54 | 43.0 | 4.51e-01 | 84.1% | 99.5% |
| 4998737 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.54 | 44.0 | 4.42e-01 | 86.1% | 97.1% |
| 3427033 | 207.1.1.95 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 | 0.54 | 39.0 | 3.52e-01 | 73.1% | 87.4% |
| 3873850 | 2007.9.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR | 0.53 | 35.0 | 3.71e-01 | 87.5% | 74.1% |
| 4021340 | 2007.9.1.9 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › PF29907 | 0.52 | 42.0 | 4.50e-01 | 84.6% | 100.0% |
| 5020652 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.50 | 41.0 | 4.29e-01 | 87.0% | 99.5% |