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SRR1747018_scaffold_15_prodigal-single.1__X__X__00399

Bact-Vir

SRR1747018_scaffold_15_prodigal-single.1__X__X__00399

Identity

Kingdom:
phage

Quality

67.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 158-266
PDB
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4kz1A00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.75 67.0 6.18e-01 95.4% 97.0%
2cc3A00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.72 63.0 5.72e-01 95.4% 91.0%
4gl6A01 3.10.450.570 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Domain of unknown function (DUF5037), N-terminal subdomain 0.72 45.0 5.18e-01 89.9% 85.4%
1of5B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.70 61.0 5.80e-01 96.3% 94.5%
3cnxA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 60.0 5.54e-01 95.4% 92.8%
2qiyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 60.0 5.60e-01 96.3% 94.8%
2xepB01 3.10.450.280 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 58.0 5.79e-01 100.0% 89.5%
4fczA00 3.10.450.710 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Tgt2/MlaC 0.68 60.0 5.00e-01 95.4% 76.0%
4ebgA00 3.10.450.560 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 48.0 5.06e-01 96.3% 82.5%
6p3lA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 60.0 5.88e-01 95.4% 91.3%
3er7B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 57.0 5.51e-01 94.5% 92.7%
5tgnA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 58.0 5.87e-01 94.5% 94.5%
3q90B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 58.0 5.46e-01 95.4% 86.9%
5evhA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 57.0 5.49e-01 95.4% 86.0%
1uliB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 56.0 4.77e-01 95.4% 83.6%
1ciyA02 2.100.10.10 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain 0.58 42.0 3.49e-01 77.1% 94.4%
1zh8A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.56 36.0 3.13e-01 96.3% 39.0%
3v5nB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.55 38.0 3.21e-01 93.6% 41.8%
7d8gA01 2.40.380.10 Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like 0.54 37.0 3.31e-01 97.2% 46.7%
1xfsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 37.0 3.30e-01 94.5% 49.4%
4dokA01 3.50.70.10 Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › 0.53 45.0 4.09e-01 95.4% 88.4%
6p2kB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 47.0 3.23e-01 99.1% 77.7%
3eb7A03 2.100.10.10 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain 0.52 44.0 3.65e-01 92.7% 94.4%
4pj2A00 2.40.128.460 Mainly Beta › Beta Barrel › Lipocalin › Periplasmic lysozyme inhibitor of I-type lysozyme 0.52 43.0 4.25e-01 94.5% 84.3%
1dlcA03 2.100.10.10 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain 0.51 42.0 3.56e-01 91.7% 94.4%
3mcrA00 3.30.460.80 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit 0.51 38.0 3.40e-01 78.0% 63.6%
4dooA01 3.50.70.10 Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › 0.50 43.0 3.90e-01 95.4% 85.9%
4dolA01 3.50.70.10 Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › 0.50 42.0 3.81e-01 95.4% 84.6%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3490456 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.75 47.0 4.25e-01 95.4% 46.9%
3474420 220.1.1.123 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st 0.75 46.0 4.15e-01 94.5% 45.3%
3696424 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.72 66.0 5.93e-01 100.0% 90.0%
185767 3359.1.1.2 a+b two layers › hypothetical protein RUMGNA_01148-related › hypothetical protein RUMGNA_01148-related › hypothetical protein RUMGNA_01148-related › DUF5037 0.72 45.0 3.48e-01 89.9% 29.5%
4481016 243.1.1.6 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › VirB8 0.71 62.0 5.72e-01 95.4% 92.9%
5033517 243.1.1.23 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF3887 0.71 60.0 6.26e-01 92.7% 99.0%
3942438 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.70 45.0 4.51e-01 90.8% 64.5%
3572958 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.69 34.0 4.47e-01 89.0% 86.7%
1490091 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.67 58.0 5.57e-01 95.4% 84.9%
1907494 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.67 58.0 5.87e-01 94.5% 94.5%
4237498 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.66 42.0 4.07e-01 90.8% 56.0%
4180235 243.3.1.5 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › FTP 0.66 43.0 4.86e-01 94.5% 90.0%
3212332 243.1.1.85 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26531 0.65 57.0 5.38e-01 96.3% 90.8%
3219433 243.1.1.75 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 0.64 56.0 5.38e-01 95.4% 84.0%
4335306 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.64 57.0 5.51e-01 98.2% 94.4%
3221045 243.1.1.75 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 0.64 55.0 5.20e-01 96.3% 88.1%
3240258 243.1.1.75 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 0.64 55.0 5.39e-01 95.4% 88.3%
3219435 243.1.1.75 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 0.63 56.0 4.66e-01 98.2% 56.2%
3219432 243.1.1.75 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 0.63 55.0 5.38e-01 96.3% 88.3%
3658595 2.1.1.130 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 0.61 35.0 4.26e-01 76.1% 88.6%
3662984 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 35.0 3.92e-01 76.1% 75.3%
3430377 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.58 38.0 4.16e-01 89.0% 81.1%
3279698 2004.1.1.711 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF27531 0.58 49.0 4.10e-01 91.7% 84.2%
3288407 206.1.1.56 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › DUF2252 0.57 51.0 3.39e-01 100.0% 30.4%
3723616 5.1.4.35 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase 0.56 51.0 3.41e-01 100.0% 83.1%
4463754 76.1.1.1 beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I › Endotoxin_M 0.55 40.0 3.32e-01 78.0% 85.7%
1069807 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.55 38.0 3.01e-01 93.6% 34.2%
3676791 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 34.0 4.11e-01 76.1% 93.3%
3405067 206.1.1.55 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › EcKL 0.54 45.0 3.05e-01 89.9% 29.4%
1688895 2003.1.3.4 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Lys_Orn_oxgnase 0.53 42.0 3.52e-01 84.4% 85.6%
3215420 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 46.0 3.74e-01 98.2% 90.7%
4487334 76.1.1.1 beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I › Endotoxin_M 0.52 43.0 3.54e-01 91.7% 87.6%
4948119 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.52 42.0 4.11e-01 95.4% 80.0%
3724603 5.1.4.36 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N 0.51 47.0 3.14e-01 100.0% 85.3%
3720028 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 36.0 3.56e-01 96.3% 69.6%
3330582 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.51 38.0 3.70e-01 79.8% 81.6%
3274691 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 45.0 3.05e-01 99.1% 69.5%
3795297 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 36.0 3.62e-01 100.0% 72.8%
3966667 809.1.1.0 a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP 0.50 32.0 3.66e-01 96.3% 88.7%
3535752 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 34.0 3.23e-01 98.2% 55.7%
D2 medium residues 1-54
PDB
D3 medium residues 55-76_104-152
PDB
Domain cluster: representative
CATH (63)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.82 75.0 7.32e-01 98.6% 94.7%
2xepB01 3.10.450.280 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.78 68.0 5.77e-01 95.8% 80.7%
1ygyB03 3.30.1330.90 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › D-3-phosphoglycerate dehydrogenase; domain 3 0.76 67.0 5.41e-01 100.0% 90.6%
3blzA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.74 64.0 5.39e-01 98.6% 95.2%
4orlA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.72 60.0 5.14e-01 90.1% 95.5%
4hz9B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.70 59.0 4.96e-01 94.4% 95.9%
3fh1A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.70 61.0 5.12e-01 98.6% 91.8%
3ecfA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 59.0 4.90e-01 97.2% 83.6%
3lygA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 60.0 5.03e-01 98.6% 93.3%
2gu3A02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 53.0 5.54e-01 98.6% 98.4%
3ge2A00 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.66 46.0 4.35e-01 94.4% 59.6%
8bddA02 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.66 58.0 3.70e-01 100.0% 87.2%
5tgnA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 58.0 5.02e-01 98.6% 97.2%
3h3hB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 56.0 4.77e-01 97.2% 96.7%
3wirA01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.66 56.0 3.81e-01 94.4% 40.8%
3nixB00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.65 47.0 2.93e-01 76.1% 79.3%
2g30A02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.65 53.0 4.52e-01 95.8% 54.3%
4mb7A01 3.20.190.10 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal 0.65 58.0 4.81e-01 100.0% 96.0%
4htgA03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.65 55.0 5.32e-01 94.4% 96.2%
2mj7A00 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.65 52.0 4.15e-01 95.8% 44.0%
3cmbA00 2.40.400.10 Mainly Beta › Beta Barrel › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like 0.63 51.0 3.50e-01 90.1% 79.2%
1qf6A02 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.63 51.0 4.48e-01 88.7% 92.5%
6wqbA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.63 47.0 3.73e-01 78.9% 56.4%
3eliA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.63 54.0 4.38e-01 98.6% 72.2%
1so7A00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.63 53.0 3.42e-01 95.8% 33.8%
3zqsA01 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.63 48.0 4.51e-01 97.2% 67.0%
6psyA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.62 54.0 3.80e-01 97.2% 66.5%
1x99A00 2.60.270.20 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Cytolysin/lectin 0.62 56.0 4.38e-01 98.6% 70.3%
3n8hA02 3.30.1300.10 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain 0.62 38.0 3.76e-01 71.8% 57.9%
2qpvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.62 54.0 4.44e-01 98.6% 66.7%
4fpwB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 54.0 4.12e-01 97.2% 51.6%
6aonA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 49.0 4.10e-01 87.3% 91.1%
1zylA01 3.30.200.70 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.61 49.0 4.95e-01 88.7% 98.6%
1ci0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 45.0 3.29e-01 78.9% 87.3%
3c96A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 44.0 3.37e-01 76.1% 85.1%
2w7qB00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.61 51.0 3.82e-01 91.5% 81.7%
1reoA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 45.0 3.51e-01 77.5% 99.3%
5ksdA04 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.60 53.0 4.19e-01 98.6% 72.3%
8gq6A01 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.60 52.0 3.48e-01 98.6% 28.6%
7snsB01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 52.0 4.06e-01 98.6% 96.9%
5h9kA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 52.0 4.12e-01 100.0% 63.6%
3fgbA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 50.0 3.31e-01 100.0% 35.0%
3otlA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 51.0 4.03e-01 98.6% 49.7%
2hesX00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 52.0 3.42e-01 100.0% 38.3%
4mjgA00 3.30.2030.30 Alpha Beta › 2-Layer Sandwich › TBP-like › 0.59 43.0 3.36e-01 81.7% 68.4%
3icaB00 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.59 46.0 3.41e-01 88.7% 35.9%
1wv4B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 48.0 3.68e-01 88.7% 91.6%
2rk0A01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.58 45.0 3.79e-01 90.1% 49.6%
2e1bA02 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.57 49.0 4.11e-01 98.6% 86.0%
3bgtA01 2.40.400.10 Mainly Beta › Beta Barrel › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like 0.57 46.0 3.34e-01 94.4% 82.7%
1qwdB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 48.0 3.76e-01 100.0% 62.0%
1aqbA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 50.0 3.77e-01 100.0% 46.3%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.56 40.0 3.17e-01 76.1% 73.4%
3kewB02 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.55 44.0 3.57e-01 90.1% 98.6%
3ic9A03 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 43.0 3.68e-01 87.3% 90.2%
7vd7A01 3.10.450.530 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 0.55 42.0 3.88e-01 83.1% 85.9%
1gqyB02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.54 43.0 3.01e-01 84.5% 88.5%
2b4wA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.53 45.0 3.09e-01 100.0% 49.5%
6cz4A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 38.0 3.65e-01 77.5% 91.9%
3ebwA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 46.0 3.73e-01 100.0% 91.5%
5r0dB01 2.60.34.20 Mainly Beta › Sandwich › Substrate Binding Domain Of DNAk; Chain A, domain 1 › 0.51 42.0 3.49e-01 97.2% 100.0%
4qrlA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.51 42.0 3.77e-01 98.6% 74.5%
3u97A00 3.10.450.530 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 0.51 40.0 3.96e-01 88.7% 94.8%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4991490 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.83 67.0 7.04e-01 100.0% 95.4%
5053933 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.80 63.0 6.61e-01 93.0% 92.3%
4596146 243.1.1.104 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Imm-NTF2 0.79 66.0 5.34e-01 90.1% 99.2%
4953814 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.78 60.0 6.46e-01 93.0% 98.3%
1853949 243.1.1.35 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › ORF_12_N 0.77 68.0 5.91e-01 95.8% 83.0%
3957605 243.1.1.35 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › ORF_12_N 0.77 67.0 6.02e-01 94.4% 98.9%
3237828 331.9.1.9 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › PF26171 0.74 53.0 4.58e-01 93.0% 49.1%
4988847 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.74 64.0 6.33e-01 95.8% 90.7%
4937589 243.4.1.0 a+b two layers › Cystatin-like › DsbC/DsbG N-terminal domain-like › DsbC/DsbG N-terminal domain-like 0.73 54.0 5.66e-01 88.7% 86.2%
3980136 243.3.1.21 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › YsaB 0.72 60.0 5.98e-01 97.2% 89.3%
1094910 243.1.1.21 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF3828 0.70 59.0 4.96e-01 94.4% 95.9%
1949063 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.70 61.0 5.43e-01 97.2% 98.0%
3271434 331.9.1.9 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › PF26171 0.70 53.0 4.53e-01 93.0% 50.9%
3509038 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.70 55.0 4.91e-01 98.6% 60.0%
3286756 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.70 57.0 4.91e-01 90.1% 93.0%
3887495 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.69 55.0 4.69e-01 98.6% 53.0%
1095153 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.69 61.0 3.79e-01 98.6% 26.0%
4465073 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.69 54.0 4.73e-01 98.6% 57.7%
4022963 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.68 57.0 3.48e-01 91.5% 42.7%
3727127 206.1.1.11 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.68 60.0 3.74e-01 100.0% 68.0%
5078475 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.68 58.0 4.60e-01 95.8% 56.6%
3628642 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.68 60.0 3.79e-01 98.6% 38.6%
3217505 9.1.1.55 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7045 0.67 57.0 4.86e-01 93.0% 83.5%
3793643 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.67 59.0 3.55e-01 100.0% 26.5%
3477607 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.67 59.0 3.37e-01 98.6% 16.6%
3321190 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.67 59.0 3.83e-01 98.6% 30.0%
3189451 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.67 60.0 5.18e-01 100.0% 92.7%
3575356 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 59.0 3.80e-01 98.6% 25.6%
3587060 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.66 55.0 5.47e-01 93.0% 96.0%
3384535 708.1.1.25 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › SWIM 0.66 47.0 4.14e-01 74.6% 52.4%
5010092 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.66 53.0 4.50e-01 85.9% 84.3%
3600210 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 60.0 3.82e-01 100.0% 43.2%
3818651 331.3.1.3 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.66 48.0 3.25e-01 76.1% 72.5%
3302307 12.1.1.87 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › SWIM 0.66 47.0 4.12e-01 74.6% 51.4%
4946507 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.66 57.0 5.60e-01 97.2% 93.3%
3742163 109.4.1.1794 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd 0.66 58.0 3.67e-01 100.0% 31.0%
362621 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.66 56.0 4.77e-01 97.2% 96.7%
3174353 5.1.4.573 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30151 0.65 56.0 3.51e-01 97.2% 21.8%
3709212 7579.1.1.0 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.65 58.0 3.31e-01 100.0% 17.6%
2589440 4036.1.1.1 a+b two layers › Insertion domain in adenylylcyclase toxin (the edema factor) › Insertion domain in adenylylcyclase toxin (the edema factor) › Insertion domain in adenylylcyclase toxin (the edema factor) › Anthrax_toxA 0.65 50.0 4.15e-01 83.1% 80.3%
5079413 5.1.3.272 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SBBP 0.65 57.0 3.86e-01 98.6% 33.2%
3787121 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.65 56.0 4.72e-01 98.6% 58.4%
3637283 5.1.4.441 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Clathrin-link 0.65 58.0 3.65e-01 100.0% 32.7%
5008591 206.1.1.9 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 0.65 54.0 3.95e-01 95.8% 77.1%
3937921 5.1.3.170 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_IFT140_2nd 0.65 58.0 3.73e-01 100.0% 39.1%
3205376 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.64 56.0 3.48e-01 97.2% 66.4%
3375268 5084.5.1.3 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 0.64 50.0 3.52e-01 83.1% 91.8%
3715021 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.64 48.0 3.51e-01 80.3% 48.5%
3174263 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.64 57.0 3.51e-01 100.0% 42.4%
3936785 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.64 53.0 4.60e-01 98.6% 60.0%
2583626 331.3.1.14 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF3568 0.64 53.0 4.60e-01 94.4% 63.8%
5032559 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.63 51.0 4.76e-01 90.1% 94.4%
4195924 5.1.4.277 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_EIPR1 0.62 54.0 3.34e-01 95.8% 35.6%
3736590 9.14.1.0 beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W 0.62 46.0 4.10e-01 97.2% 56.0%
3873966 5.1.4.277 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_EIPR1 0.62 54.0 3.39e-01 95.8% 32.5%
3561488 206.1.1.10 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase 0.61 51.0 3.31e-01 95.8% 59.7%
3273263 5.1.4.169 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.61 53.0 3.34e-01 98.6% 25.1%
3784764 5.1.4.169 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.61 55.0 3.45e-01 98.6% 27.1%
3269932 5.1.5.27 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › APEH_N 0.61 53.0 3.23e-01 98.6% 19.8%
4583633 206.1.1.35 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH_6_hur 0.60 52.0 3.51e-01 100.0% 69.8%
4289288 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.60 48.0 4.03e-01 90.1% 57.8%
3744121 5.1.4.36 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N 0.59 52.0 3.27e-01 100.0% 31.2%
5040847 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.58 50.0 3.35e-01 98.6% 25.8%
5051694 218.4.1.1 a+b two layers › Enolase-N/ribosomal protein › Dhaf4260 N-terminal domain › Dhaf4260 N-terminal domain › DUF4213 0.57 42.0 3.65e-01 77.5% 88.2%
3420866 216.1.1.9 a+b two layers › UBC-like › UBC-like › UBC-like › FANCL_d2 0.57 49.0 4.43e-01 98.6% 69.0%
4526577 5.1.3.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b 0.57 51.0 3.43e-01 100.0% 41.1%
3990496 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.56 43.0 4.39e-01 98.6% 81.4%
4020163 216.1.1.1 a+b two layers › UBC-like › UBC-like › UBC-like › UQ_con 0.56 50.0 3.89e-01 98.6% 49.3%
3665166 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 46.0 3.07e-01 97.2% 27.6%
4972214 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.54 48.0 2.91e-01 100.0% 24.6%
4951266 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.51 44.0 2.79e-01 98.6% 48.5%