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SRR1747018_scaffold_15_prodigal-single.1__X__X__00433
Bact-VirSRR1747018_scaffold_15_prodigal-single.1__X__X__00433
Identity
- Kingdom:
- phage
Quality
58.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-181
D2
medium
residues 182-255_335-349_405-426
D3
medium
residues 256-334_371-404
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3mwmA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 32.0 | 3.81e-01 | 92.9% | 69.3% |
| 2vxzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 29.0 | 3.68e-01 | 100.0% | 71.2% |
| 2l02A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 30.0 | 3.46e-01 | 95.6% | 65.9% |
| 4i98C01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 30.0 | 3.62e-01 | 77.9% | 76.0% |
| 2qvoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 28.0 | 3.21e-01 | 90.3% | 60.9% |
| 3cuoD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 29.0 | 3.19e-01 | 93.8% | 58.5% |
| 1x3aA00 | 1.10.3970.10 | Mainly Alpha › Orthogonal Bundle › BSD domain-like fold › BSD domain | 0.56 | 33.0 | 3.49e-01 | 98.2% | 64.0% |
| 5dx9A01 | 3.30.70.1020 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trehalose-6-phosphate phosphatase related protein; domain 2 | 0.56 | 28.0 | 3.41e-01 | 97.3% | 73.6% |
| 2e9fB01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.56 | 39.0 | 4.20e-01 | 87.6% | 85.4% |
| 3w6kC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 29.0 | 3.27e-01 | 79.6% | 67.8% |
| 3m8eA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 30.0 | 3.21e-01 | 82.3% | 62.4% |
| 2jscB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 28.0 | 3.23e-01 | 96.5% | 70.0% |
| 2hroA02 | 1.10.274.10 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › PtsI, HPr-binding domain | 0.52 | 44.0 | 4.24e-01 | 92.0% | 87.5% |
| 3r31A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.52 | 44.0 | 3.41e-01 | 92.9% | 55.7% |
| 3nybA01 | 1.10.1410.10 | Mainly Alpha › Orthogonal Bundle › Poly(a)-polymerase, middle domain › | 0.52 | 47.0 | 3.79e-01 | 100.0% | 81.7% |
| 3rosA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.50 | 43.0 | 3.34e-01 | 96.5% | 59.0% |
| 1go4A00 | 3.30.900.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain | 0.50 | 43.0 | 3.64e-01 | 95.6% | 93.4% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3394692 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 42.0 | 4.39e-01 | 79.6% | 81.0% |
| 4954890 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.55 | 28.0 | 3.35e-01 | 97.3% | 71.2% |
| 5037085 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 30.0 | 3.30e-01 | 79.6% | 67.8% |
| 2511579 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.51 | 27.0 | 3.02e-01 | 84.1% | 62.2% |
| 4038279 | 1037.1.1.1 ↗ | alpha bundles › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › LGT | 0.50 | 44.0 | 3.35e-01 | 100.0% | 81.4% |
| 3227000 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.50 | 45.0 | 2.75e-01 | 100.0% | 56.1% |