←Back to structures
SRR1747018_scaffold_15_prodigal-single.1__X__X__00445
Bact-VirSRR1747018_scaffold_15_prodigal-single.1__X__X__00445
Identity
- Kingdom:
- phage
Quality
85.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 395-498
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08239.18 best | SH3_3 | 34.7 | 2.20e-08 | 55.8% | 79.6% |
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2mk5A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.83 | 58.0 | 5.29e-01 | 71.2% | 70.2% |
| 1r77A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.81 | 58.0 | 6.01e-01 | 74.0% | 89.9% |
| 2epdA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.75 | 43.0 | 5.02e-01 | 90.4% | 78.9% |
| 4epcA01 | 2.30.30.170 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 50.0 | 5.58e-01 | 73.1% | 96.3% |
| 4x9cD00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 34.0 | 4.34e-01 | 70.2% | 85.0% |
| 1udlA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 50.0 | 5.20e-01 | 84.6% | 95.9% |
| 1ft9A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 37.0 | 3.48e-01 | 73.1% | 48.1% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.61 | 36.0 | 4.17e-01 | 70.2% | 88.1% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 40.0 | 4.52e-01 | 94.2% | 88.6% |
| 2rqrA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 45.0 | 4.29e-01 | 99.0% | 73.1% |
| 2nysA00 | 2.30.30.220 | Mainly Beta › Roll › SH3 type barrels. › SspB-like | 0.55 | 38.0 | 3.72e-01 | 71.2% | 73.5% |
| 2btwA00 | 3.90.70.30 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Phytochelatin synthase, N-terminal domain | 0.55 | 45.0 | 3.57e-01 | 87.5% | 96.2% |
| 2h6cA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 35.0 | 3.26e-01 | 73.1% | 52.7% |
| 4umwA02 | 2.70.150.10 | Mainly Beta › Distorted Sandwich › Calcium-transporting ATPase, cytoplasmic transduction domain A › Calcium-transporting ATPase, cytoplasmic transduction domain A | 0.53 | 31.0 | 3.29e-01 | 72.1% | 65.2% |
| 1o5lA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 37.0 | 3.45e-01 | 73.1% | 58.9% |
| 1omiA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 37.0 | 3.72e-01 | 73.1% | 73.3% |
| 3iwzA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 36.0 | 3.35e-01 | 73.1% | 56.7% |
| 3shrA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 35.0 | 3.25e-01 | 76.9% | 54.7% |
| 3oisB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.50 | 45.0 | 3.35e-01 | 99.0% | 84.3% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4032300 | 4.1.1.59 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_5 | 0.86 | 59.0 | 6.37e-01 | 70.2% | 96.7% |
| 4031435 | 4.1.1.143 ↗ | beta barrels › SH3 › SH3 › SH3 › TagH_SH3-like | 0.85 | 52.0 | 6.51e-01 | 72.1% | 98.5% |
| 3700747 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 58.0 | 6.23e-01 | 71.2% | 100.0% |
| 1293364 | 4.1.1.59 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_5 | 0.83 | 58.0 | 5.29e-01 | 71.2% | 70.2% |
| 4446467 | 4.1.1.278 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_YKFC_2nd | 0.83 | 50.0 | 6.25e-01 | 90.4% | 96.9% |
| 4041535 | 4.1.1.59 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_5 | 0.82 | 58.0 | 6.30e-01 | 73.1% | 100.0% |
| 4009391 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 56.0 | 6.33e-01 | 93.3% | 92.5% |
| 4033059 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 55.0 | 6.23e-01 | 70.2% | 96.2% |
| 1905739 | 4.1.1.59 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_5 | 0.80 | 56.0 | 6.18e-01 | 72.1% | 100.0% |
| 1673571 | 4.1.1.120 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_16 | 0.80 | 56.0 | 6.50e-01 | 72.1% | 100.0% |
| 4291404 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 53.0 | 6.21e-01 | 86.5% | 96.0% |
| 3969959 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 59.0 | 6.36e-01 | 78.8% | 100.0% |
| 4020558 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 46.0 | 5.72e-01 | 94.2% | 95.4% |
| 3692073 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.76 | 45.0 | 5.40e-01 | 92.3% | 87.1% |
| 4802780 | 4.1.1.83 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_6 | 0.75 | 65.0 | 5.26e-01 | 92.3% | 81.6% |
| 4340107 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 51.0 | 6.02e-01 | 85.6% | 98.7% |
| 3838867 | 4.1.1.82 ↗ | beta barrels › SH3 › SH3 › SH3 › N_NLPC_P60,SH3_6 | 0.73 | 61.0 | 5.47e-01 | 88.5% | 87.1% |
| 1828190 | 4.1.1.82 ↗ | beta barrels › SH3 › SH3 › SH3 › N_NLPC_P60,SH3_6 | 0.73 | 61.0 | 5.01e-01 | 89.4% | 70.3% |
| 3715828 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.72 | 54.0 | 6.07e-01 | 91.3% | 100.0% |
| 3479037 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 45.0 | 5.11e-01 | 97.1% | 82.5% |
| 3387889 | 4.1.1.451 ↗ | beta barrels › SH3 › SH3 › SH3 › N_NLPC_P60, SH3_6, SH3_7 | 0.72 | 65.0 | 4.91e-01 | 97.1% | 58.7% |
| 3979903 | 4.1.1.465 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_6, SH3_7 | 0.71 | 63.0 | 4.57e-01 | 95.2% | 52.0% |
| 1826883 | 4.1.1.83 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_6 | 0.71 | 54.0 | 6.07e-01 | 92.3% | 100.0% |
| 1120123 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 50.0 | 5.64e-01 | 73.1% | 97.4% |
| 4386715 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.70 | 55.0 | 6.07e-01 | 93.3% | 100.0% |
| 4213326 | 4.1.1.86 ↗ | beta barrels › SH3 › SH3 › SH3 › GW | 0.70 | 49.0 | 5.51e-01 | 73.1% | 96.2% |
| 3474715 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 38.0 | 4.68e-01 | 93.3% | 86.2% |
| 2725406 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.69 | 46.0 | 5.09e-01 | 94.2% | 85.4% |
| 158943 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.68 | 43.0 | 4.84e-01 | 91.3% | 83.5% |
| 3926701 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.68 | 43.0 | 5.27e-01 | 97.1% | 100.0% |
| 3594081 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 50.0 | 5.57e-01 | 89.4% | 100.0% |
| 3225762 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.64 | 43.0 | 4.85e-01 | 76.0% | 94.7% |
| 158911 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.59 | 45.0 | 4.68e-01 | 91.3% | 85.6% |
| 5065077 | 4111.1.1.2 ↗ | a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC | 0.57 | 39.0 | 3.61e-01 | 71.2% | 58.3% |
| 4030846 | 4111.1.1.2 ↗ | a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC | 0.56 | 38.0 | 3.56e-01 | 70.2% | 59.3% |
| 3482646 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 50.0 | 3.97e-01 | 98.1% | 96.0% |
| 2845210 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.53 | 36.0 | 3.32e-01 | 73.1% | 52.1% |
| 3782128 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.52 | 37.0 | 3.29e-01 | 73.1% | 52.0% |
| 1281 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.52 | 37.0 | 3.45e-01 | 73.1% | 58.9% |
D2
medium
residues 236-345
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1p2xA00 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.57 | 41.0 | 3.71e-01 | 100.0% | 52.8% |
| 1wvtA00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.53 | 38.0 | 3.46e-01 | 74.5% | 75.0% |
| 7m2wE01 | 1.20.120.1900 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Gamma-tubulin complex, C-terminal domain | 0.51 | 38.0 | 2.81e-01 | 79.1% | 92.9% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4480896 | 193.3.1.1 ↗ | alpha bundles › CH domain-like › Surface-layer homology (SLH) domains › Surface-layer homology (SLH) domains › SLH | 0.79 | 56.0 | 4.68e-01 | 100.0% | 45.0% |
| 4268436 | 3978.1.1.2 ↗ | alpha complex topology › Integral membrane Acyl-CoA desaturase › Integral membrane Acyl-CoA desaturase › Integral membrane Acyl-CoA desaturase › FA_hydroxylase | 0.51 | 38.0 | 2.84e-01 | 80.0% | 90.5% |
| 5032560 | 141.1.1.1 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › polyprenyl_synt | 0.50 | 40.0 | 2.91e-01 | 86.4% | 80.3% |