←Back to structures
SRR1747018_scaffold_15_prodigal-single.1__X__X__00448
Bact-VirSRR1747018_scaffold_15_prodigal-single.1__X__X__00448
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-131
Domain cluster:
rep: NC_029048.2__YP_009221738.1__PHICD211_20135__00153__D2-127
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1a94A00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.80 | 55.0 | 6.21e-01 | 100.0% | 89.9% |
| 5c9dB00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.80 | 60.0 | 6.26e-01 | 100.0% | 83.3% |
| 1fmbA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.79 | 57.0 | 6.29e-01 | 100.0% | 90.4% |
| 3liyA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.77 | 61.0 | 6.36e-01 | 100.0% | 90.5% |
| 3s8iA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.77 | 54.0 | 5.49e-01 | 96.9% | 73.4% |
| 3sqfA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.76 | 52.0 | 5.95e-01 | 97.7% | 93.7% |
| 2fivA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.75 | 57.0 | 6.09e-01 | 100.0% | 89.4% |
| 1mvpA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.74 | 56.0 | 6.02e-01 | 100.0% | 90.2% |
| 4ehcA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.64 | 58.0 | 4.38e-01 | 100.0% | 43.6% |
| 3aupD01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.64 | 59.0 | 5.15e-01 | 100.0% | 79.8% |
| 1j71A01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.62 | 59.0 | 5.24e-01 | 100.0% | 79.2% |
| 1uh9A02 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.58 | 50.0 | 4.79e-01 | 100.0% | 79.9% |
| 1j71A02 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.57 | 49.0 | 4.52e-01 | 100.0% | 73.3% |
| 1miqA02 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.56 | 48.0 | 4.60e-01 | 100.0% | 79.6% |
| 1smrA02 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.55 | 49.0 | 4.59e-01 | 100.0% | 80.0% |
| 1boqA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 37.0 | 4.03e-01 | 100.0% | 85.0% |
| 4b08A01 | 2.40.50.730 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 29.0 | 3.49e-01 | 100.0% | 81.5% |
| 4ic5A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 34.0 | 3.77e-01 | 100.0% | 79.8% |
| 2l01A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 25.0 | 3.12e-01 | 72.7% | 75.3% |
ECOD (68)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4933942 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.80 | 57.0 | 5.99e-01 | 96.9% | 80.9% |
| 3354954 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.80 | 39.0 | 4.65e-01 | 96.9% | 67.8% |
| 3932187 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.79 | 56.0 | 6.05e-01 | 96.9% | 84.5% |
| 4992338 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.79 | 54.0 | 5.94e-01 | 93.8% | 84.8% |
| 5031732 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.79 | 57.0 | 5.97e-01 | 96.9% | 81.7% |
| 3934729 | 1.1.1.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP | 0.78 | 55.0 | 5.61e-01 | 96.1% | 73.6% |
| 139793 | 1.1.1.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP | 0.78 | 61.0 | 6.39e-01 | 100.0% | 90.5% |
| 4964766 | 1.1.1.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Zn_protease | 0.77 | 57.0 | 6.15e-01 | 100.0% | 89.1% |
| 4933116 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.77 | 54.0 | 5.74e-01 | 96.9% | 80.9% |
| 3334785 | 1.1.1.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP | 0.77 | 55.0 | 5.54e-01 | 95.3% | 73.1% |
| 4993656 | 1.1.1.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP | 0.77 | 59.0 | 6.11e-01 | 97.7% | 85.0% |
| 5031909 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.77 | 55.0 | 5.77e-01 | 96.9% | 80.5% |
| 5030771 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.76 | 55.0 | 5.76e-01 | 96.9% | 81.7% |
| 5073196 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.76 | 59.0 | 6.04e-01 | 99.2% | 83.7% |
| 3878578 | 1.1.1.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › PF30863 | 0.76 | 58.0 | 5.89e-01 | 95.3% | 80.8% |
| 5031162 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.76 | 55.0 | 5.85e-01 | 93.0% | 83.5% |
| 5032562 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.76 | 56.0 | 5.79e-01 | 94.5% | 80.8% |
| 3496964 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.76 | 55.0 | 5.58e-01 | 96.1% | 76.0% |
| 4984547 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.75 | 57.0 | 5.96e-01 | 96.9% | 84.7% |
| 3517572 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.75 | 50.0 | 5.33e-01 | 96.9% | 75.7% |
| 5059503 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.75 | 63.0 | 6.19e-01 | 100.0% | 81.9% |
| 3934130 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.75 | 57.0 | 5.67e-01 | 96.1% | 76.9% |
| 3923810 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.75 | 56.0 | 5.94e-01 | 95.3% | 87.0% |
| 5034399 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.75 | 58.0 | 5.79e-01 | 100.0% | 78.2% |
| 4933012 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.75 | 56.0 | 5.85e-01 | 93.8% | 83.3% |
| 5023444 | 1.1.1.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Zn_protease | 0.74 | 55.0 | 5.90e-01 | 93.0% | 88.2% |
| 4993154 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.74 | 61.0 | 6.16e-01 | 98.4% | 85.9% |
| 3366156 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.74 | 54.0 | 5.57e-01 | 93.0% | 80.0% |
| 4969351 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.74 | 57.0 | 6.07e-01 | 96.9% | 89.6% |
| 4968321 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.74 | 55.0 | 6.04e-01 | 91.4% | 93.3% |
| 4969904 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.73 | 61.0 | 6.00e-01 | 100.0% | 82.2% |
| 4928555 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.73 | 57.0 | 5.87e-01 | 100.0% | 84.7% |
| 4968533 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.73 | 58.0 | 6.09e-01 | 95.3% | 91.3% |
| 3421072 | 1.1.1.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › PF30863 | 0.73 | 52.0 | 5.54e-01 | 95.3% | 82.6% |
| 5049040 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.73 | 54.0 | 5.87e-01 | 96.9% | 91.7% |
| 4993389 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.72 | 55.0 | 5.71e-01 | 96.9% | 85.0% |
| 3929659 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.72 | 54.0 | 5.30e-01 | 95.3% | 72.6% |
| 3929755 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.72 | 56.0 | 5.57e-01 | 96.9% | 78.5% |
| 5029170 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.72 | 59.0 | 5.91e-01 | 98.4% | 84.6% |
| 3724372 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.72 | 54.0 | 5.01e-01 | 92.2% | 63.9% |
| 3516105 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.72 | 56.0 | 5.52e-01 | 95.3% | 77.0% |
| 5031038 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.71 | 57.0 | 5.79e-01 | 94.5% | 84.8% |
| 4436288 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.71 | 47.0 | 5.10e-01 | 94.5% | 78.2% |
| 3559341 | 1.1.1.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › PF30863 | 0.71 | 59.0 | 5.72e-01 | 100.0% | 80.0% |
| 4969974 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.71 | 58.0 | 5.91e-01 | 97.7% | 87.2% |
| 3514088 | 1.1.1.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › DUF1758 | 0.70 | 54.0 | 5.35e-01 | 96.1% | 76.1% |
| 5032263 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.70 | 58.0 | 5.79e-01 | 96.1% | 84.6% |
| 5028105 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.70 | 60.0 | 5.90e-01 | 98.4% | 85.9% |
| 5032212 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.69 | 56.0 | 5.56e-01 | 96.9% | 82.0% |
| 5032107 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.68 | 56.0 | 5.62e-01 | 94.5% | 85.4% |
| 4999539 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.68 | 53.0 | 5.38e-01 | 96.9% | 83.1% |
| 4934668 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.67 | 55.0 | 5.56e-01 | 94.5% | 85.4% |
| 3506977 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.67 | 55.0 | 5.33e-01 | 96.1% | 78.3% |
| 4992554 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.65 | 61.0 | 5.74e-01 | 100.0% | 85.2% |
| 3723244 | 1.1.1.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_N | 0.63 | 59.0 | 4.08e-01 | 100.0% | 40.7% |
| 3202154 | 1.1.1.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_N | 0.63 | 59.0 | 4.03e-01 | 100.0% | 40.1% |
| 3577579 | 1.1.1.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › DUF1758 | 0.63 | 56.0 | 5.23e-01 | 95.3% | 83.2% |
| 4377861 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.63 | 59.0 | 5.18e-01 | 100.0% | 91.1% |
| 3582847 | 1.1.2.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › DUF1758 | 0.62 | 53.0 | 5.39e-01 | 94.5% | 92.8% |
| 3408507 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.62 | 58.0 | 4.00e-01 | 100.0% | 35.1% |
| 3509026 | 1.1.1.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › DUF1758 | 0.61 | 54.0 | 4.90e-01 | 95.3% | 81.2% |
| 3992019 | 1.1.1.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › DUF1758 | 0.61 | 46.0 | 4.61e-01 | 96.1% | 76.9% |
| 3307211 | 1.1.1.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_N | 0.61 | 55.0 | 4.91e-01 | 96.1% | 91.4% |
| 3506070 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.61 | 55.0 | 5.09e-01 | 96.9% | 81.9% |
| 3422366 | 1.1.1.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_C+TAXi_N | 0.59 | 54.0 | 3.74e-01 | 100.0% | 47.5% |
| 3811940 | 1.1.1.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_C+TAXi_N | 0.58 | 52.0 | 3.70e-01 | 100.0% | 37.2% |
| 3647487 | 1.1.1.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_C | 0.51 | 45.0 | 3.82e-01 | 100.0% | 74.5% |
| 4032314 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.50 | 36.0 | 3.82e-01 | 100.0% | 82.6% |