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SRR1747018_scaffold_2_1202_curated_prodigal-single.1__X__X__00136
Bact-VirSRR1747018_scaffold_2_1202_curated_prodigal-single.1__X__X__00136
Identity
- Kingdom:
- phage
Quality
73.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1050-1110
Domain cluster:
rep: aot2015-NO19_SRR1761693_USA_trim_clean_trim_clean_scaffold_5_curated_closed_complete_reversed_prodigal-single.1__X__X__00247__D92-149
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03793.25 best | PASTA | 46.0 | 5.50e-12 | 91.8% | 95.3% |
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3py9A01 | 3.30.10.20 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › | 0.90 | 77.0 | 7.46e-01 | 90.2% | 92.4% |
| 3m9gA02 | 3.30.10.20 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › | 0.86 | 77.0 | 7.40e-01 | 96.7% | 97.1% |
| 3m9gA03 | 3.30.10.20 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › | 0.84 | 76.0 | 7.37e-01 | 98.4% | 95.5% |
| 5e0yA00 | 3.30.10.20 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › | 0.83 | 73.0 | 7.04e-01 | 95.1% | 97.1% |
| 2kudA01 | 3.30.10.20 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › | 0.81 | 71.0 | 6.84e-01 | 96.7% | 91.4% |
| 2kuiA02 | 3.30.10.20 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › | 0.79 | 67.0 | 6.54e-01 | 95.1% | 94.1% |
| 2mgvA00 | 3.30.10.20 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › | 0.77 | 66.0 | 6.47e-01 | 93.4% | 93.8% |
| 4jtmA00 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.64 | 56.0 | 5.08e-01 | 98.4% | 79.0% |
| 3ossD00 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.63 | 53.0 | 3.97e-01 | 95.1% | 38.9% |
| 7pmpA01 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.61 | 50.0 | 4.73e-01 | 91.8% | 79.7% |
| 3d37A02 | 3.55.50.10 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains | 0.61 | 52.0 | 4.68e-01 | 95.1% | 72.9% |
| 4q20A02 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.59 | 43.0 | 3.32e-01 | 80.3% | 44.3% |
| 3gr5A01 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.58 | 48.0 | 4.35e-01 | 95.1% | 68.2% |
| 3vmaA03 | 3.30.2060.10 | Alpha Beta › 2-Layer Sandwich › Penicillin-binding protein 1b fold › Penicillin-binding protein 1b domain | 0.57 | 40.0 | 3.60e-01 | 75.4% | 100.0% |
| 3d36B01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.55 | 40.0 | 3.03e-01 | 80.3% | 37.5% |
| 1a5yA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.53 | 39.0 | 2.65e-01 | 85.2% | 55.3% |
| 7zp0A01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.52 | 38.0 | 2.97e-01 | 80.3% | 46.6% |
ECOD (70)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4218629 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.95 | 84.0 | 8.56e-01 | 95.1% | 95.0% |
| 3288243 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.95 | 83.0 | 8.42e-01 | 91.8% | 98.3% |
| 4381179 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.95 | 83.0 | 8.22e-01 | 91.8% | 93.7% |
| 3586987 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.93 | 82.0 | 8.28e-01 | 95.1% | 95.0% |
| 4507938 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.92 | 79.0 | 7.96e-01 | 90.2% | 98.3% |
| 4511703 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.92 | 85.0 | 8.00e-01 | 96.7% | 92.9% |
| 4406673 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.91 | 80.0 | 7.79e-01 | 91.8% | 96.9% |
| 4238173 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.91 | 78.0 | 7.65e-01 | 90.2% | 93.8% |
| 4938764 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.91 | 78.0 | 7.62e-01 | 90.2% | 93.8% |
| 4363768 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.91 | 85.0 | 7.78e-01 | 98.4% | 86.7% |
| 2800195 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.91 | 80.0 | 8.10e-01 | 96.7% | 96.7% |
| 4429064 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.91 | 80.0 | 7.81e-01 | 93.4% | 96.9% |
| 5019345 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.90 | 80.0 | 7.94e-01 | 93.4% | 98.4% |
| 4214934 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.90 | 84.0 | 7.97e-01 | 98.4% | 92.9% |
| 4629817 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.90 | 81.0 | 7.91e-01 | 95.1% | 96.9% |
| 4188592 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.90 | 78.0 | 7.60e-01 | 96.7% | 86.2% |
| 3284755 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.90 | 81.0 | 7.67e-01 | 95.1% | 92.9% |
| 5018432 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.90 | 75.0 | 7.44e-01 | 88.5% | 96.9% |
| 4295594 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.90 | 75.0 | 7.62e-01 | 88.5% | 98.3% |
| 4110313 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.89 | 80.0 | 7.60e-01 | 95.1% | 92.9% |
| 4647874 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.89 | 81.0 | 7.70e-01 | 96.7% | 92.9% |
| 5019344 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.89 | 76.0 | 7.59e-01 | 91.8% | 98.4% |
| 4371646 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.89 | 79.0 | 7.73e-01 | 95.1% | 100.0% |
| 4397539 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.88 | 77.0 | 7.55e-01 | 93.4% | 96.9% |
| 4420868 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.88 | 76.0 | 7.30e-01 | 91.8% | 97.1% |
| 1145747 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.88 | 77.0 | 7.49e-01 | 93.4% | 94.0% |
| 4042904 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.88 | 77.0 | 7.66e-01 | 91.8% | 95.2% |
| 4607404 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.88 | 77.0 | 7.54e-01 | 93.4% | 95.4% |
| 4231180 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.88 | 77.0 | 7.53e-01 | 93.4% | 92.3% |
| 4258797 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.88 | 79.0 | 7.75e-01 | 96.7% | 98.5% |
| 4664511 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.87 | 72.0 | 7.51e-01 | 91.8% | 98.2% |
| 4420926 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.87 | 79.0 | 7.74e-01 | 96.7% | 98.5% |
| 4563563 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.86 | 72.0 | 7.31e-01 | 88.5% | 98.3% |
| 3587206 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.86 | 74.0 | 7.30e-01 | 91.8% | 98.4% |
| 5030610 | 294.2.1.0 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C | 0.85 | 67.0 | 7.06e-01 | 83.6% | 96.4% |
| 3589669 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.85 | 68.0 | 7.14e-01 | 91.8% | 96.4% |
| 4117817 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.85 | 75.0 | 7.39e-01 | 96.7% | 98.5% |
| 4951610 | 294.2.1.0 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C | 0.85 | 69.0 | 7.29e-01 | 86.9% | 98.2% |
| 4938412 | 294.2.1.0 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C | 0.85 | 72.0 | 7.27e-01 | 90.2% | 95.0% |
| 4401481 | 294.2.1.0 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C | 0.84 | 76.0 | 7.05e-01 | 98.4% | 100.0% |
| 4147122 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.84 | 73.0 | 6.93e-01 | 93.4% | 94.3% |
| 1936665 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.83 | 70.0 | 7.17e-01 | 91.8% | 94.9% |
| 1835928 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.83 | 73.0 | 7.01e-01 | 98.4% | 85.7% |
| 1936666 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.82 | 73.0 | 7.01e-01 | 98.4% | 87.0% |
| 3288204 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.82 | 75.0 | 7.38e-01 | 100.0% | 98.5% |
| 2800194 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.82 | 67.0 | 6.90e-01 | 100.0% | 96.5% |
| 4390436 | 294.2.1.0 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C | 0.82 | 68.0 | 7.10e-01 | 91.8% | 100.0% |
| 1120788 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.81 | 71.0 | 6.84e-01 | 96.7% | 91.4% |
| 4503917 | 294.2.1.0 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C | 0.81 | 66.0 | 6.93e-01 | 86.9% | 96.4% |
| 4377868 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.81 | 71.0 | 6.63e-01 | 96.7% | 94.7% |
| 4469625 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.80 | 72.0 | 6.67e-01 | 98.4% | 96.0% |
| 4974039 | 294.2.1.0 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C | 0.80 | 65.0 | 6.80e-01 | 86.9% | 100.0% |
| 4936169 | 294.2.1.0 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C | 0.77 | 64.0 | 6.76e-01 | 95.1% | 100.0% |
| 4356302 | 294.2.1.0 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C | 0.77 | 68.0 | 6.85e-01 | 100.0% | 98.3% |
| 4086298 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.77 | 65.0 | 6.37e-01 | 93.4% | 95.4% |
| 4218916 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.76 | 66.0 | 6.19e-01 | 96.7% | 96.0% |
| 4442156 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.76 | 67.0 | 5.90e-01 | 100.0% | 96.7% |
| 3967139 | 3070.1.1.11 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › type_II_gspD_N0 | 0.64 | 52.0 | 4.81e-01 | 91.8% | 75.0% |
| 1070142 | 3070.1.1.11 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › type_II_gspD_N0 | 0.63 | 53.0 | 4.90e-01 | 96.7% | 77.8% |
| 4554874 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.62 | 46.0 | 3.35e-01 | 80.3% | 44.3% |
| 3948879 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.62 | 52.0 | 4.93e-01 | 95.1% | 77.3% |
| 4008875 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.61 | 51.0 | 4.84e-01 | 95.1% | 77.3% |
| 2883219 | 3070.1.1.11 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › type_II_gspD_N0 | 0.59 | 51.0 | 4.58e-01 | 100.0% | 67.8% |
| 3163777 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.59 | 48.0 | 4.44e-01 | 91.8% | 70.0% |
| 3966286 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.59 | 50.0 | 4.69e-01 | 95.1% | 77.3% |
| 3967349 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.58 | 48.0 | 4.40e-01 | 95.1% | 68.2% |
| 3974036 | 3070.1.1.10 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › T3S_SPI-1_N0 | 0.58 | 49.0 | 4.62e-01 | 96.7% | 78.7% |
| 4087530 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.56 | 46.0 | 4.33e-01 | 95.1% | 76.0% |
| 4480906 | 3070.1.1.10 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › T3S_SPI-1_N0 | 0.56 | 46.0 | 4.30e-01 | 95.1% | 71.2% |
| 4554306 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.52 | 37.0 | 2.91e-01 | 80.3% | 46.7% |
D2
medium
residues 312-335_414-536
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00912.29 best | Transgly | 72.7 | 3.60e-20 | 50.3% | 39.3% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2oqoA00 | 1.10.3810.10 | Mainly Alpha › Orthogonal Bundle › Penicillin binding protein transpeptidase fold › Biosynthetic peptidoglycan transglycosylase-like | 0.92 | 71.0 | 6.52e-01 | 78.9% | 98.3% |
| 5fgzA02 | 1.10.3810.10 | Mainly Alpha › Orthogonal Bundle › Penicillin binding protein transpeptidase fold › Biosynthetic peptidoglycan transglycosylase-like | 0.89 | 69.0 | 6.60e-01 | 78.9% | 94.5% |
| 2olvB02 | 1.10.3810.10 | Mainly Alpha › Orthogonal Bundle › Penicillin binding protein transpeptidase fold › Biosynthetic peptidoglycan transglycosylase-like | 0.87 | 74.0 | 6.70e-01 | 87.8% | 100.0% |
| 2oc5A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.54 | 42.0 | 3.68e-01 | 81.6% | 94.4% |
| 2vzcB00 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.53 | 33.0 | 3.54e-01 | 81.0% | 70.6% |
| 4h9nC00 | 1.20.58.2170 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 35.0 | 3.17e-01 | 73.5% | 47.8% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1122242 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.93 | 61.0 | 7.45e-01 | 82.3% | 97.0% |
| 3987240 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.92 | 75.0 | 6.03e-01 | 83.7% | 74.9% |
| 3588448 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.92 | 78.0 | 5.98e-01 | 86.4% | 68.1% |
| 4660292 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.91 | 77.0 | 6.08e-01 | 86.4% | 78.9% |
| 4173279 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.91 | 63.0 | 5.15e-01 | 70.1% | 71.7% |
| 4034309 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.91 | 74.0 | 5.75e-01 | 83.0% | 81.1% |
| 4044894 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.91 | 75.0 | 6.02e-01 | 85.0% | 74.1% |
| 3987246 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.91 | 77.0 | 6.00e-01 | 87.1% | 75.3% |
| 4217977 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.90 | 75.0 | 5.89e-01 | 84.4% | 72.5% |
| 3971996 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.90 | 62.0 | 5.25e-01 | 70.1% | 77.7% |
| 3980915 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.90 | 74.0 | 6.05e-01 | 85.0% | 76.7% |
| 4669149 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.90 | 73.0 | 6.10e-01 | 83.0% | 82.7% |
| 4033682 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.89 | 75.0 | 6.13e-01 | 85.7% | 80.0% |
| 4319405 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.89 | 73.0 | 6.09e-01 | 83.0% | 82.7% |
| 3839655 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.89 | 75.0 | 6.07e-01 | 86.4% | 76.4% |
| 3949767 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.89 | 76.0 | 5.94e-01 | 87.8% | 74.9% |
| 3959807 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.88 | 58.0 | 7.09e-01 | 83.7% | 99.0% |
| 4107494 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.86 | 60.0 | 5.16e-01 | 70.1% | 80.5% |
| 4584589 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.86 | 75.0 | 5.98e-01 | 89.8% | 77.3% |
| 3179352 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.57 | 48.0 | 3.98e-01 | 91.8% | 98.5% |
| 3767831 | 101.1.10.12 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Spy1 | 0.53 | 38.0 | 4.01e-01 | 85.7% | 82.2% |
| 3243678 | 193.1.1.1 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › CH | 0.53 | 33.0 | 3.63e-01 | 77.6% | 74.8% |
| 4452814 | 140.1.1.7 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_2 | 0.52 | 26.0 | 2.75e-01 | 74.8% | 49.6% |
D3
medium
residues 336-413
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00912.29 best | Transgly | 77.8 | 9.70e-22 | 100.0% | 39.9% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2oqoA00 | 1.10.3810.10 | Mainly Alpha › Orthogonal Bundle › Penicillin binding protein transpeptidase fold › Biosynthetic peptidoglycan transglycosylase-like | 0.96 | 77.0 | 5.62e-01 | 100.0% | 35.9% |
| 2olvB02 | 1.10.3810.10 | Mainly Alpha › Orthogonal Bundle › Penicillin binding protein transpeptidase fold › Biosynthetic peptidoglycan transglycosylase-like | 0.85 | 66.0 | 4.82e-01 | 100.0% | 33.2% |
| 3hzsA00 | 1.10.3810.10 | Mainly Alpha › Orthogonal Bundle › Penicillin binding protein transpeptidase fold › Biosynthetic peptidoglycan transglycosylase-like | 0.79 | 66.0 | 4.73e-01 | 100.0% | 33.5% |
| 2pmrA00 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.62 | 38.0 | 3.93e-01 | 80.8% | 64.5% |
| 2ra1A02 | 1.20.58.780 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 36.0 | 3.88e-01 | 80.8% | 67.6% |
| 7kypB01 | 1.10.3470.10 | Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC | 0.59 | 51.0 | 3.49e-01 | 96.2% | 84.1% |
| 2xzmV01 | 1.10.60.20 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 | 0.57 | 32.0 | 3.62e-01 | 94.9% | 70.5% |
| 1j1jA02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.57 | 37.0 | 3.68e-01 | 89.7% | 61.2% |
| 1lq7A00 | 1.20.1270.70 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle | 0.57 | 33.0 | 3.51e-01 | 79.5% | 65.7% |
| 1f35A00 | 2.60.120.390 | Mainly Beta › Sandwich › Jelly Rolls › Olfactory marker | 0.56 | 47.0 | 3.76e-01 | 93.6% | 90.7% |
| 3gyuA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.54 | 42.0 | 3.08e-01 | 87.2% | 79.3% |
| 3cxbA03 | 1.10.1740.30 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Secreted effector protein SifA helical domain | 0.54 | 34.0 | 3.39e-01 | 78.2% | 61.7% |
| 4ioeA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.53 | 40.0 | 3.90e-01 | 89.7% | 72.4% |
| 2p0tA01 | 1.10.60.30 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › PSPTO4464-like domains | 0.52 | 39.0 | 3.99e-01 | 94.9% | 82.9% |
| 4olsA00 | 3.40.80.10 | Alpha Beta › 3-Layer(aba) Sandwich › Lysozyme-like › Peptidoglycan recognition protein-like | 0.51 | 38.0 | 2.97e-01 | 80.8% | 63.2% |
| 3mpiA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.50 | 35.0 | 3.12e-01 | 74.4% | 53.7% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4108282 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.91 | 83.0 | 5.67e-01 | 100.0% | 31.9% |
| 4660292 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.91 | 87.0 | 5.75e-01 | 100.0% | 30.2% |
| 4584589 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.89 | 81.0 | 5.40e-01 | 100.0% | 28.8% |
| 3969665 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.76 | 70.0 | 4.71e-01 | 100.0% | 33.0% |
| 4284815 | 2002.1.1.67 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pro_dh | 0.64 | 44.0 | 2.86e-01 | 71.8% | 28.2% |
| 3940536 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.58 | 37.0 | 2.96e-01 | 93.6% | 30.3% |
| 3999359 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.57 | 39.0 | 3.37e-01 | 71.8% | 73.6% |
| 4943037 | 101.1.17.1 ↗ | alpha arrays › HTH › HTH › FF domain › Ribosomal_S17e | 0.55 | 32.0 | 3.34e-01 | 93.6% | 60.0% |
| 3236773 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.55 | 38.0 | 3.20e-01 | 93.6% | 41.5% |
| 4104951 | 5060.1.1.0 ↗ | alpha bundles › V-type ATP synthase subunit C › V-type ATP synthase subunit C › V-type ATP synthase subunit C | 0.54 | 43.0 | 3.47e-01 | 91.0% | 45.5% |
| 3909938 | 101.1.1.65 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 | 0.53 | 31.0 | 3.04e-01 | 96.2% | 50.0% |
| 5050435 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.52 | 37.0 | 2.79e-01 | 75.6% | 91.4% |
| 3961618 | 181.1.1.1 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N | 0.52 | 32.0 | 3.53e-01 | 84.6% | 80.0% |
| 3216384 | 197.1.1.0 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like | 0.52 | 37.0 | 3.23e-01 | 76.9% | 54.4% |
| 5037871 | 2003.1.1.45 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › UDPG_MGDP_dh_N | 0.51 | 43.0 | 3.04e-01 | 100.0% | 54.2% |
| 4487698 | 3754.1.1.1 ↗ | alpha bundles › Bacterial cell wall synthesis membrane enzyme MraY-related › Bacterial cell wall synthesis membrane enzyme MraY-related › Bacterial cell wall synthesis membrane enzyme MraY-related › Glycos_transf_4 | 0.51 | 41.0 | 2.95e-01 | 92.3% | 78.1% |
| 3630268 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.50 | 35.0 | 3.20e-01 | 73.1% | 85.7% |
D4
medium
residues 537-565_578-616_807-841
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3udfA01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.91 | 86.0 | 5.64e-01 | 100.0% | 82.7% |
| 3fwlA02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.88 | 84.0 | 5.39e-01 | 100.0% | 77.7% |
| 3zg9B02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.88 | 83.0 | 5.50e-01 | 100.0% | 89.0% |
| 6kghA02 | 3.30.450.330 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.71 | 57.0 | 4.91e-01 | 84.5% | 82.5% |
| 3eqvA02 | 3.30.450.330 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.71 | 57.0 | 5.19e-01 | 84.5% | 80.5% |
| 1m6kA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.67 | 54.0 | 4.00e-01 | 84.5% | 94.0% |
| 2nykA02 | 2.60.40.2530 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 32.0 | 3.54e-01 | 76.7% | 63.2% |
| 4kqdB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 43.0 | 4.16e-01 | 83.5% | 95.7% |
| 1w63Q00 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.55 | 39.0 | 3.44e-01 | 72.8% | 52.7% |
| 1wqsA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 29.0 | 3.34e-01 | 75.7% | 72.9% |
| 1xdxA01 | 3.30.1140.40 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Tctex-1 | 0.53 | 38.0 | 3.92e-01 | 78.6% | 78.0% |
| 6baoA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 39.0 | 3.55e-01 | 80.6% | 94.4% |
| 2ej9A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.51 | 38.0 | 3.15e-01 | 78.6% | 75.5% |
| 2ednA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 37.0 | 3.58e-01 | 77.7% | 68.6% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3165643 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.95 | 91.0 | 5.69e-01 | 100.0% | 80.8% |
| 4177374 | 223.3.1.14 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase, PF29195 | 0.95 | 91.0 | 6.05e-01 | 100.0% | 75.5% |
| 4007497 | 223.3.1.14 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase, PF29195 | 0.94 | 90.0 | 5.85e-01 | 100.0% | 78.9% |
| 4458271 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.94 | 90.0 | 6.10e-01 | 100.0% | 73.5% |
| 4173946 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.93 | 89.0 | 6.08e-01 | 100.0% | 73.5% |
| 3838610 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.91 | 88.0 | 6.25e-01 | 100.0% | 82.3% |
| 3973805 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.90 | 86.0 | 5.91e-01 | 100.0% | 67.5% |
| 3974035 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.89 | 85.0 | 5.98e-01 | 100.0% | 73.2% |
| 4485300 | 223.3.1.14 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase, PF29195 | 0.89 | 84.0 | 5.91e-01 | 100.0% | 72.3% |
| 3987938 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.86 | 81.0 | 5.74e-01 | 100.0% | 75.0% |
| 5053718 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.84 | 71.0 | 4.76e-01 | 87.4% | 95.5% |
| 3166061 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.84 | 80.0 | 5.49e-01 | 100.0% | 64.3% |
| 4247068 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.68 | 54.0 | 4.01e-01 | 84.5% | 94.4% |
| 4406921 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.62 | 42.0 | 4.57e-01 | 78.6% | 84.7% |
| 3386548 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.61 | 42.0 | 4.31e-01 | 80.6% | 73.0% |
| 3968365 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.61 | 48.0 | 4.01e-01 | 82.5% | 52.7% |
| 5068533 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.59 | 42.0 | 3.85e-01 | 72.8% | 63.1% |
| 3517977 | 864.1.1.2 ↗ | a+b two layers › DLC › DLC › DLC › Tctex-1 | 0.58 | 42.0 | 4.77e-01 | 77.7% | 97.5% |
| 4945022 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.58 | 42.0 | 4.25e-01 | 75.7% | 95.0% |
| 3983387 | 223.1.1.57 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › CSS-motif | 0.57 | 45.0 | 3.95e-01 | 84.5% | 62.6% |
| 4382604 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.57 | 39.0 | 3.92e-01 | 77.7% | 68.6% |
| 4532472 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 43.0 | 4.38e-01 | 81.6% | 82.0% |
| 3977017 | 223.1.1.57 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › CSS-motif | 0.56 | 46.0 | 3.58e-01 | 88.3% | 45.3% |
| 3678105 | 5.3.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › S_locus_glycop | 0.56 | 40.0 | 3.64e-01 | 73.8% | 100.0% |
| 3977907 | 223.1.1.57 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › CSS-motif | 0.56 | 46.0 | 3.48e-01 | 89.3% | 41.6% |
| 3941379 | 11.1.1.53 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DOMON | 0.56 | 40.0 | 3.33e-01 | 75.7% | 59.5% |
| 5073914 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 39.0 | 3.67e-01 | 72.8% | 64.0% |
| 3280377 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.55 | 42.0 | 3.97e-01 | 82.5% | 67.2% |
| 3705528 | 223.2.1.3 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s | 0.54 | 38.0 | 3.41e-01 | 72.8% | 53.1% |
| 3527204 | 11.1.1.1070 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF27822 | 0.53 | 35.0 | 2.97e-01 | 76.7% | 37.8% |
| 3630471 | 3008.1.1.2 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DUF5915 | 0.53 | 40.0 | 4.10e-01 | 81.6% | 97.0% |
| 3412686 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.53 | 36.0 | 3.27e-01 | 82.5% | 48.7% |
| 5046641 | 210.1.3.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases | 0.52 | 36.0 | 3.06e-01 | 70.9% | 85.5% |
| 3905967 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.52 | 36.0 | 3.65e-01 | 76.7% | 73.0% |
| 3404910 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.52 | 35.0 | 3.31e-01 | 81.6% | 56.8% |
| 4950083 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 40.0 | 4.02e-01 | 82.5% | 82.5% |
| 3599707 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 35.0 | 3.72e-01 | 71.8% | 80.0% |
| 3895929 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.51 | 33.0 | 3.39e-01 | 75.7% | 67.0% |
| 3390945 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.51 | 36.0 | 3.66e-01 | 75.7% | 72.4% |
| 3514307 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.51 | 37.0 | 3.34e-01 | 77.7% | 54.5% |
| 3913201 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.51 | 36.0 | 3.64e-01 | 77.7% | 74.0% |
| 3628863 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.51 | 35.0 | 3.03e-01 | 76.7% | 46.5% |
| 5016069 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.51 | 36.0 | 2.90e-01 | 71.8% | 85.4% |
| 3622374 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.50 | 36.0 | 3.51e-01 | 87.4% | 67.0% |
D5
medium
residues 617-785
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00905.28 best | Transpeptidase | 42.1 | 8.70e-11 | 100.0% | 59.5% |
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fwlA02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.91 | 88.0 | 6.40e-01 | 100.0% | 43.8% |
| 3zg9B02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.88 | 84.0 | 6.36e-01 | 100.0% | 47.2% |
| 2c5wB00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.87 | 84.0 | 6.19e-01 | 100.0% | 45.2% |
| 5cxwA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.87 | 84.0 | 6.20e-01 | 100.0% | 47.3% |
| 2bg1A02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.87 | 77.0 | 6.03e-01 | 100.0% | 49.4% |
| 3udfA01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.86 | 83.0 | 6.16e-01 | 100.0% | 60.1% |
| 4ztkA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.85 | 61.0 | 5.09e-01 | 100.0% | 46.3% |
| 6kghA03 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.84 | 79.0 | 7.49e-01 | 98.2% | 94.3% |
| 3vskA03 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.83 | 78.0 | 5.97e-01 | 100.0% | 59.8% |
| 6g9sA01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.82 | 78.0 | 6.06e-01 | 100.0% | 59.2% |
| 4ovdA03 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.82 | 77.0 | 7.38e-01 | 98.2% | 94.2% |
| 7rd0A02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.82 | 78.0 | 6.13e-01 | 100.0% | 58.1% |
| 3ue3A03 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.81 | 77.0 | 7.44e-01 | 98.2% | 94.0% |
| 5df7A02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.81 | 77.0 | 5.94e-01 | 100.0% | 51.9% |
| 1mwsA04 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.80 | 76.0 | 5.92e-01 | 100.0% | 54.7% |
| 5troA01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.80 | 76.0 | 5.96e-01 | 100.0% | 55.3% |
| 3lo7A02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.80 | 74.0 | 5.98e-01 | 100.0% | 56.6% |
| 3eqvA03 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.79 | 74.0 | 7.26e-01 | 98.2% | 93.9% |
| 4u3tB00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.79 | 75.0 | 5.95e-01 | 100.0% | 55.7% |
| 6pl6B01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.79 | 75.0 | 5.71e-01 | 100.0% | 52.8% |
| 4mnrA02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.79 | 75.0 | 5.92e-01 | 100.0% | 59.5% |
| 2wadA04 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.78 | 74.0 | 5.72e-01 | 100.0% | 57.7% |
| 4ewfA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.73 | 61.0 | 5.11e-01 | 100.0% | 54.9% |
| 1e25A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.69 | 59.0 | 4.92e-01 | 100.0% | 55.0% |
| 4iedA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.67 | 64.0 | 5.54e-01 | 100.0% | 74.8% |
| 6nhsA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.66 | 63.0 | 5.51e-01 | 100.0% | 75.7% |
| 4jf6A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.66 | 63.0 | 5.50e-01 | 100.0% | 74.9% |
| 4gn2A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.66 | 62.0 | 5.45e-01 | 100.0% | 80.8% |
| 1m6kA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.66 | 62.0 | 5.37e-01 | 100.0% | 76.0% |
| 1nrfA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.65 | 61.0 | 5.33e-01 | 100.0% | 72.8% |
| 1k38A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.65 | 61.0 | 5.39e-01 | 100.0% | 72.8% |
| 2xepB02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.60 | 56.0 | 4.83e-01 | 100.0% | 74.2% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3588501 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.88 | 85.0 | 6.17e-01 | 100.0% | 43.1% |
| 3165643 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.86 | 82.0 | 5.80e-01 | 100.0% | 50.4% |
| 3951119 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.86 | 82.0 | 6.23e-01 | 100.0% | 53.5% |
| 3951192 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.85 | 82.0 | 5.71e-01 | 100.0% | 40.6% |
| 3951983 | 3702.1.1.4 ↗ | beta complex topology › Penicillin binding protein dimerisation domain › Penicillin binding protein dimerisation domain › Penicillin binding protein dimerisation domain › Transpeptidase | 0.85 | 81.0 | 5.68e-01 | 100.0% | 40.7% |
| 3839186 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.85 | 81.0 | 6.16e-01 | 100.0% | 52.7% |
| 4032151 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.84 | 80.0 | 6.06e-01 | 100.0% | 52.4% |
| 4495366 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.82 | 78.0 | 5.83e-01 | 100.0% | 53.6% |
| 3163688 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.81 | 77.0 | 5.81e-01 | 100.0% | 53.3% |
| 3966462 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.81 | 77.0 | 5.92e-01 | 100.0% | 51.6% |
| 4459942 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.80 | 76.0 | 5.91e-01 | 100.0% | 58.8% |
| 4652220 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.80 | 76.0 | 5.89e-01 | 100.0% | 53.5% |
| 4681169 | 223.3.1.0 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins | 0.80 | 76.0 | 5.51e-01 | 100.0% | 44.5% |
| 1853146 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.80 | 75.0 | 5.76e-01 | 100.0% | 53.8% |
| None | — | 0.79 | 75.0 | 5.39e-01 | 100.0% | 40.0% | |
| 3965638 | 223.3.1.0 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins | 0.79 | 75.0 | 5.37e-01 | 100.0% | 39.8% |
| 3950741 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.79 | 75.0 | 5.55e-01 | 100.0% | 45.6% |
| 3839475 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.78 | 75.0 | 5.67e-01 | 100.0% | 52.5% |
| 3283393 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.78 | 75.0 | 5.55e-01 | 100.0% | 46.5% |
| 3573602 | 223.3.1.15 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase, PF30382, PF30384 | 0.78 | 75.0 | 5.40e-01 | 100.0% | 50.0% |
| 4077515 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.78 | 74.0 | 5.62e-01 | 100.0% | 58.9% |
| 4041233 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.78 | 74.0 | 5.75e-01 | 100.0% | 53.7% |
| 4821910 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.76 | 40.0 | 4.93e-01 | 84.0% | 78.9% |
| 3981283 | 223.3.1.19 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › PF30382, PF30384 | 0.70 | 68.0 | 4.90e-01 | 100.0% | 46.1% |
| 3386029 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.67 | 64.0 | 5.55e-01 | 100.0% | 74.6% |
| 3269500 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 28.0 | 3.51e-01 | 100.0% | 83.8% |
D6
medium
residues 935-1013
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03793.25 best | PASTA | 30.8 | 3.10e-07 | 77.2% | 96.9% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3m9gA03 | 3.30.10.20 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › | 0.83 | 63.0 | 6.82e-01 | 79.7% | 94.0% |
| 5e0yA00 | 3.30.10.20 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › | 0.81 | 60.0 | 6.42e-01 | 78.5% | 97.1% |
| 3py9A01 | 3.30.10.20 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › | 0.76 | 58.0 | 6.21e-01 | 79.7% | 98.5% |
| 2kuiA02 | 3.30.10.20 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › | 0.74 | 56.0 | 6.01e-01 | 81.0% | 97.1% |
| 2kudA01 | 3.30.10.20 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › | 0.72 | 54.0 | 5.74e-01 | 81.0% | 92.9% |
| 2mgvA00 | 3.30.10.20 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › | 0.70 | 53.0 | 5.66e-01 | 81.0% | 100.0% |
| 3lhoA01 | 3.10.180.50 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › | 0.59 | 42.0 | 3.03e-01 | 75.9% | 82.8% |
| 2yyhA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.52 | 35.0 | 2.97e-01 | 70.9% | 86.2% |
| 4hfqA02 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.51 | 35.0 | 2.96e-01 | 72.2% | 83.5% |
| 3ip3A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.51 | 35.0 | 2.70e-01 | 73.4% | 50.2% |
| 2ozpA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.50 | 36.0 | 2.87e-01 | 75.9% | 44.3% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4188592 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.88 | 62.0 | 6.77e-01 | 81.0% | 87.7% |
| 5019344 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.87 | 64.0 | 7.15e-01 | 77.2% | 100.0% |
| 4429064 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.87 | 65.0 | 7.17e-01 | 78.5% | 98.5% |
| 4507938 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.86 | 63.0 | 7.16e-01 | 75.9% | 100.0% |
| 4397539 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.85 | 64.0 | 7.02e-01 | 78.5% | 98.5% |
| 2800195 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.85 | 60.0 | 6.80e-01 | 78.5% | 95.0% |
| 4420868 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.85 | 64.0 | 6.78e-01 | 78.5% | 100.0% |
| 4117817 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.85 | 63.0 | 6.89e-01 | 77.2% | 95.4% |
| 4231180 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.84 | 65.0 | 7.14e-01 | 82.3% | 98.5% |
| 4629817 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.84 | 64.0 | 6.98e-01 | 78.5% | 96.9% |
| 4938764 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.83 | 63.0 | 6.90e-01 | 79.7% | 100.0% |
| 4371646 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.83 | 61.0 | 6.63e-01 | 75.9% | 96.9% |
| 4664511 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.83 | 56.0 | 6.59e-01 | 77.2% | 100.0% |
| 4607404 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.83 | 63.0 | 6.87e-01 | 79.7% | 98.5% |
| 4295594 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.83 | 59.0 | 6.73e-01 | 74.7% | 100.0% |
| 3586987 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.83 | 59.0 | 6.69e-01 | 89.9% | 96.7% |
| 4218629 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.82 | 58.0 | 6.61e-01 | 89.9% | 96.7% |
| 5018432 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.82 | 60.0 | 6.58e-01 | 75.9% | 100.0% |
| 4406673 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.82 | 61.0 | 6.66e-01 | 78.5% | 100.0% |
| 4611700 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.82 | 63.0 | 6.91e-01 | 82.3% | 98.5% |
| 4214934 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.81 | 64.0 | 6.81e-01 | 83.5% | 94.3% |
| 5019345 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.81 | 60.0 | 6.58e-01 | 77.2% | 98.4% |
| 4042904 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.81 | 61.0 | 6.76e-01 | 79.7% | 100.0% |
| 4363768 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.81 | 62.0 | 6.39e-01 | 81.0% | 86.7% |
| 4377868 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.81 | 62.0 | 6.37e-01 | 81.0% | 96.0% |
| 3960451 | 294.2.1.0 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C | 0.80 | 58.0 | 6.35e-01 | 75.9% | 98.5% |
| 3288243 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.80 | 59.0 | 6.66e-01 | 77.2% | 100.0% |
| 4110313 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.80 | 61.0 | 6.50e-01 | 81.0% | 95.7% |
| 4147122 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.80 | 61.0 | 6.48e-01 | 81.0% | 98.6% |
| 1835928 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.80 | 56.0 | 5.89e-01 | 78.5% | 81.4% |
| 3284755 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.80 | 63.0 | 6.64e-01 | 83.5% | 97.1% |
| 1936666 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.79 | 55.0 | 5.86e-01 | 78.5% | 82.6% |
| 4563563 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.79 | 57.0 | 6.39e-01 | 74.7% | 100.0% |
| 4469625 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.79 | 60.0 | 6.15e-01 | 79.7% | 94.7% |
| 3284751 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.79 | 60.0 | 6.23e-01 | 81.0% | 95.9% |
| 3288204 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.78 | 57.0 | 6.27e-01 | 77.2% | 96.9% |
| 4381179 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.78 | 58.0 | 6.46e-01 | 79.7% | 98.4% |
| 4511703 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.78 | 61.0 | 6.45e-01 | 83.5% | 95.7% |
| 4258797 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.77 | 56.0 | 6.13e-01 | 77.2% | 95.4% |
| 4629818 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.76 | 56.0 | 6.17e-01 | 77.2% | 100.0% |
| 4238173 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.76 | 57.0 | 6.24e-01 | 79.7% | 100.0% |
| 1936665 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.76 | 54.0 | 6.09e-01 | 78.5% | 98.3% |
| 4086298 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.76 | 57.0 | 6.17e-01 | 79.7% | 98.5% |
| 1145747 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.76 | 58.0 | 6.18e-01 | 81.0% | 98.5% |
| 3587206 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.75 | 55.0 | 6.02e-01 | 77.2% | 100.0% |
| 4218916 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.75 | 56.0 | 5.77e-01 | 79.7% | 96.0% |
| 1120801 | 294.2.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C › PASTA | 0.73 | 54.0 | 5.69e-01 | 78.5% | 97.1% |
| 4938412 | 294.2.1.0 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C | 0.71 | 51.0 | 5.80e-01 | 78.5% | 100.0% |
| 3598634 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 41.0 | 2.65e-01 | 89.9% | 49.9% |