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SRR1747018_scaffold_2_1202_curated_prodigal-single.1__X__X__00158

Bact-Vir

SRR1747018_scaffold_2_1202_curated_prodigal-single.1__X__X__00158

Identity

Kingdom:
phage

Quality

82.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 28-251
PDB
Domain cluster: representative
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4cvuA05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.75 27.0 4.44e-01 89.7% 85.4%
2r39A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.72 32.0 4.55e-01 89.3% 85.3%
4o65A00 2.60.120.570 Mainly Beta › Sandwich › Jelly Rolls › Particulate methane monooxygenase, b subunit. Chain: A, domain 1 0.70 39.0 4.69e-01 91.1% 79.7%
1h6eA02 2.60.40.1170 Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B 0.68 32.0 4.52e-01 88.8% 93.3%
1xvsA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.68 32.0 4.23e-01 89.7% 80.5%
5w4tA01 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.67 28.0 4.08e-01 89.3% 85.9%
4en2A02 2.60.40.1170 Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B 0.67 31.0 4.46e-01 89.3% 94.2%
2blfA02 2.60.40.650 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 28.0 3.83e-01 89.3% 74.6%
4dxzA00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.66 34.0 4.73e-01 94.2% 100.0%
4fx5A01 2.60.40.3670 Mainly Beta › Sandwich › Immunoglobulin-like › 0.65 35.0 4.30e-01 89.7% 80.3%
2xtsA02 2.60.40.650 Mainly Beta › Sandwich › Immunoglobulin-like › 0.65 28.0 3.62e-01 89.3% 67.7%
4um8B02 2.60.40.1510 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 0.65 36.0 4.48e-01 95.5% 86.3%
1nctA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 26.0 3.78e-01 89.3% 81.6%
4dzgA00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.64 34.0 4.60e-01 95.1% 100.0%
3cu7A06 2.20.130.20 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › 0.63 28.0 3.93e-01 90.2% 82.9%
7sz8A03 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.63 26.0 3.93e-01 88.4% 88.5%
4yokA02 2.60.40.2060 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 28.0 3.93e-01 89.3% 86.7%
2pn5A08 2.60.120.1540 Mainly Beta › Sandwich › Jelly Rolls › 0.62 28.0 3.93e-01 89.7% 85.6%
1wmdA02 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.60 33.0 4.42e-01 90.2% 100.0%
1pzdA01 2.60.40.1480 Mainly Beta › Sandwich › Immunoglobulin-like › Coatomer, gamma subunit, appendage domain 0.60 32.0 3.70e-01 98.7% 69.9%
7tg5A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 27.0 3.80e-01 92.9% 87.9%
6v55A01 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.59 31.0 4.13e-01 86.6% 96.4%
2d3jA00 2.60.40.2170 Mainly Beta › Sandwich › Immunoglobulin-like › Wnt, WIF domain 0.59 34.0 3.99e-01 88.8% 79.0%
1yllC02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 27.0 3.69e-01 92.9% 86.2%
4jfhE01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 27.0 3.66e-01 88.8% 84.3%
4b60A02 2.60.40.1290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 35.0 4.14e-01 91.1% 87.8%
1lnsA04 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 45.0 4.92e-01 100.0% 100.0%
2y7lA02 2.60.40.2430 Mainly Beta › Sandwich › Immunoglobulin-like › Agglutinin-like protein, N-terminal domain, N2 subdomain 0.57 32.0 3.75e-01 87.1% 78.8%
1tvgA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 33.0 4.15e-01 90.6% 94.1%
2waaA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 30.0 3.87e-01 89.7% 91.1%
2x12A01 2.60.40.2010 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 38.0 4.08e-01 96.0% 78.9%
1w8oA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 28.0 3.89e-01 96.0% 100.0%
4jdzA02 2.60.40.1290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 37.0 4.20e-01 91.5% 90.3%
2o8qA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 25.0 3.37e-01 89.3% 79.5%
3n40F03 2.60.40.350 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 24.0 3.46e-01 95.5% 90.0%
5cyxA03 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.54 28.0 3.81e-01 95.5% 100.0%
1o75A04 2.60.40.1270 Mainly Beta › Sandwich › Immunoglobulin-like › Penicillin-binding protein Tp47, domain D 0.53 22.0 3.44e-01 94.2% 100.0%
3lwcA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 25.0 3.50e-01 74.6% 92.2%
2vmhA00 2.60.120.1060 Mainly Beta › Sandwich › Jelly Rolls › NPCBM/NEW2 domain 0.53 34.0 4.16e-01 90.2% 98.6%
2cdoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 33.0 4.11e-01 88.8% 100.0%
4uapA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 35.0 4.22e-01 89.3% 99.3%
3lsoA03 2.60.40.2260 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 33.0 3.88e-01 88.4% 88.6%
1k12A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 34.0 4.03e-01 90.6% 92.4%
3hqxA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 25.0 3.46e-01 80.8% 93.3%
4gwmA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 36.0 4.16e-01 89.7% 97.0%
3bcwA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 25.0 3.46e-01 87.9% 95.2%
2q5wE00 3.90.1170.40 Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Molybdopterin biosynthesis MoaE subunit 0.51 25.0 3.06e-01 96.9% 71.5%
1j8rA00 2.60.40.1370 Mainly Beta › Sandwich › Immunoglobulin-like › Bacterial adhesin receptor binding domain 0.50 35.0 3.74e-01 90.2% 80.1%
2j7qA00 3.90.70.120 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.50 36.0 3.62e-01 72.8% 86.6%
3unpA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 36.0 3.93e-01 90.6% 86.0%
1s55A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.50 34.0 4.00e-01 89.7% 97.4%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4938163 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.78 34.0 4.93e-01 87.9% 87.6%
5059264 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.76 35.0 4.95e-01 87.1% 88.2%
4992962 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.74 36.0 4.92e-01 89.3% 87.5%
5060821 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.71 42.0 5.15e-01 89.3% 89.0%
4538264 11.1.1.44 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Alpha_adaptinC2 0.71 31.0 4.36e-01 92.0% 80.7%
3245882 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.70 30.0 4.12e-01 90.2% 75.8%
3199160 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.70 34.0 4.76e-01 89.7% 96.2%
4932582 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.70 32.0 4.41e-01 89.3% 84.3%
3709938 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.68 36.0 4.40e-01 89.7% 76.7%
3588940 10.32.1.260 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › YfhO 0.68 37.0 4.28e-01 90.2% 72.1%
4972680 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.67 31.0 4.57e-01 90.6% 100.0%
3999209 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.67 33.0 4.39e-01 92.0% 85.8%
5012622 10.48.1.0 ↗ beta sandwiches › jelly-roll › Camelysin metallo-endopeptidase-like › Camelysin metallo-endopeptidase-like 0.67 46.0 5.46e-01 89.3% 98.7%
5082908 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.67 34.0 4.71e-01 88.8% 99.1%
3605691 11.1.5.7 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub 0.67 34.0 4.73e-01 88.8% 96.5%
4382620 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.66 31.0 4.51e-01 92.4% 100.0%
4024342 11.1.5.7 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub 0.66 34.0 4.26e-01 89.3% 79.3%
3889465 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.66 35.0 4.76e-01 86.6% 99.1%
3217567 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.65 33.0 4.51e-01 86.6% 93.0%
3414212 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.65 31.0 4.24e-01 89.3% 87.0%
3895304 10.32.1.6 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein 0.65 39.0 4.20e-01 89.7% 68.2%
3710159 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.64 30.0 4.12e-01 92.4% 87.3%
3598703 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.64 37.0 4.46e-01 90.6% 85.5%
4982154 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.64 29.0 4.25e-01 90.2% 95.0%
3489211 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.64 35.0 4.67e-01 93.3% 99.2%
3849644 10.32.1.6 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein 0.64 38.0 4.72e-01 90.2% 95.6%
3592097 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 35.0 4.39e-01 92.4% 85.7%
3028291 11.1.5.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Fimbrial 0.63 43.0 4.82e-01 90.2% 87.8%
4581989 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.63 33.0 4.49e-01 92.4% 100.0%
2773190 11.1.1.361 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_123_N_2 0.63 40.0 4.72e-01 89.3% 88.9%
3491700 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 37.0 4.30e-01 89.7% 80.6%
5060540 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 38.0 4.61e-01 89.7% 90.7%
5070101 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.62 32.0 4.30e-01 94.2% 92.5%
3787002 11.1.5.7 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub 0.62 34.0 4.42e-01 89.3% 95.2%
3241013 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.61 29.0 4.01e-01 89.3% 90.7%
5038393 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.61 34.0 4.23e-01 89.7% 88.9%
4639413 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.60 36.0 4.08e-01 86.6% 76.5%
4991092 3370.1.1.0 ↗ beta sandwiches › Lactococcin 972 › Lactococcin 972 › Lactococcin 972 0.60 24.0 3.88e-01 83.5% 100.0%
3596678 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.60 31.0 4.24e-01 92.4% 99.1%
3513205 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.59 32.0 4.24e-01 86.2% 100.0%
2426587 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 36.0 4.56e-01 89.3% 99.3%
5062018 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.57 34.0 4.09e-01 89.3% 87.3%
1156538 10.32.1.56 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CE2_N 0.56 30.0 3.87e-01 89.7% 91.1%
4364805 11.1.1.33 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arch_flagellin 0.56 31.0 3.70e-01 89.7% 79.2%
5060494 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.55 27.0 3.46e-01 89.7% 80.0%
2841943 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 34.0 4.23e-01 91.5% 97.9%
3411299 10.32.1.180 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CEP104_N 0.55 37.0 3.97e-01 90.2% 77.0%
3514708 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.54 32.0 4.03e-01 92.9% 100.0%
5079380 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.54 25.0 3.52e-01 90.2% 89.1%
4960962 10.11.1.0 ↗ beta sandwiches › jelly-roll › Thiamin pyrophosphokinase, substrate-binding domain › Thiamin pyrophosphokinase, substrate-binding domain 0.54 23.0 3.46e-01 81.7% 98.8%
1877808 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.53 25.0 3.63e-01 87.1% 99.0%
3596983 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 28.0 3.64e-01 89.7% 95.8%
3946460 10.12.1.28 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › HutD 0.50 24.0 3.30e-01 82.6% 87.8%