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SRR1747018_scaffold_2_1202_curated_prodigal-single.1__X__X__00207
Bact-VirSRR1747018_scaffold_2_1202_curated_prodigal-single.1__X__X__00207
Identity
- Kingdom:
- phage
Quality
63.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-62
Domain cluster:
representative
CATH (47)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vcaA02 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.75 | 54.0 | 4.24e-01 | 76.3% | 79.8% |
| 4gyiA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.70 | 49.0 | 4.12e-01 | 72.9% | 98.0% |
| 2xepB01 | 3.10.450.280 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.70 | 48.0 | 3.82e-01 | 71.2% | 42.1% |
| 2zylA01 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.68 | 48.0 | 3.70e-01 | 74.6% | 68.1% |
| 3gkeA01 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.68 | 48.0 | 3.74e-01 | 74.6% | 70.8% |
| 4rbnA01 | 3.10.450.330 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 51.0 | 4.04e-01 | 84.7% | 40.3% |
| 1w0pA03 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 56.0 | 3.95e-01 | 96.6% | 54.0% |
| 3mx7A00 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.64 | 55.0 | 4.85e-01 | 98.3% | 97.8% |
| 2dk7A00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.64 | 48.0 | 4.53e-01 | 100.0% | 67.1% |
| 4agiA00 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.63 | 56.0 | 3.51e-01 | 98.3% | 37.3% |
| 1iucA00 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.63 | 54.0 | 3.40e-01 | 96.6% | 36.5% |
| 1w0pA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 56.0 | 3.97e-01 | 100.0% | 57.1% |
| 7ob9B01 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.62 | 54.0 | 3.84e-01 | 100.0% | 73.4% |
| 7c38B01 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.62 | 53.0 | 3.36e-01 | 96.6% | 38.6% |
| 7o06C01 | 3.30.1470.10 | Alpha Beta › 2-Layer Sandwich › Photosystem 1 Reaction Centre Subunit Ii; Chain: D; › Photosystem I PsaD, reaction center subunit II | 0.62 | 43.0 | 3.75e-01 | 74.6% | 84.6% |
| 5jozA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.61 | 53.0 | 3.40e-01 | 98.3% | 38.0% |
| 1xteA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.61 | 45.0 | 3.75e-01 | 83.1% | 70.7% |
| 6ruiB04 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.61 | 51.0 | 3.74e-01 | 100.0% | 81.3% |
| 3jbtA05 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.61 | 52.0 | 3.23e-01 | 96.6% | 25.5% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 50.0 | 4.36e-01 | 94.9% | 86.5% |
| 3da7E00 | 3.40.20.20 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › | 0.60 | 49.0 | 4.15e-01 | 93.2% | 88.3% |
| 2hzmA02 | 2.20.140.20 | Mainly Beta › Single Sheet › q64v53_bacfr protein fold › | 0.60 | 49.0 | 4.51e-01 | 98.3% | 97.6% |
| 4kg0A01 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.60 | 48.0 | 3.63e-01 | 91.5% | 73.9% |
| 7wffb01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.59 | 44.0 | 2.77e-01 | 79.7% | 31.5% |
| 1nkgA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.58 | 43.0 | 2.89e-01 | 81.4% | 31.5% |
| 1ospO02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.58 | 45.0 | 3.46e-01 | 86.4% | 65.1% |
| 1sgoA01 | 3.30.2280.10 | Alpha Beta › 2-Layer Sandwich › copper amine oxidase-like fold › Hypothetical protein (hspc210) | 0.58 | 44.0 | 3.76e-01 | 88.1% | 54.6% |
| 1gutA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.58 | 39.0 | 3.77e-01 | 72.9% | 61.2% |
| 1mmuA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.58 | 41.0 | 2.61e-01 | 76.3% | 14.5% |
| 8dc1A01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.58 | 41.0 | 2.73e-01 | 76.3% | 96.0% |
| 1xipA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 51.0 | 3.12e-01 | 100.0% | 41.1% |
| 3ebwA01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 46.0 | 3.65e-01 | 96.6% | 79.6% |
| 3vz9B00 | 3.30.457.50 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Chromosome segregation protein Spc25 | 0.57 | 42.0 | 3.57e-01 | 81.4% | 62.1% |
| 1i3zA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.57 | 47.0 | 4.02e-01 | 96.6% | 64.1% |
| 4r7rA00 | 3.30.1490.410 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Uncharacterised protein PF16224, DUF4883 | 0.56 | 46.0 | 3.67e-01 | 100.0% | 44.3% |
| 2yztA00 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 43.0 | 4.20e-01 | 86.4% | 95.5% |
| 4ytlA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 40.0 | 4.27e-01 | 86.4% | 98.0% |
| 3oe3C00 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.53 | 40.0 | 3.71e-01 | 91.5% | 97.7% |
| 4b9wA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 41.0 | 4.21e-01 | 89.8% | 91.1% |
| 4ok4A02 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.53 | 44.0 | 2.75e-01 | 96.6% | 66.8% |
| 2do3A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 41.0 | 4.37e-01 | 89.8% | 100.0% |
| 4atoA00 | 3.10.129.130 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › | 0.53 | 39.0 | 2.92e-01 | 83.1% | 66.1% |
| 5yy8A00 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.53 | 42.0 | 2.88e-01 | 98.3% | 50.4% |
| 1tg0A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 42.0 | 4.09e-01 | 91.5% | 97.0% |
| 1lckA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 42.0 | 4.22e-01 | 89.8% | 98.3% |
| 1x6bA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 42.0 | 4.17e-01 | 94.9% | 96.9% |
| 4b9dB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.50 | 37.0 | 3.31e-01 | 83.1% | 80.6% |
ECOD (79)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3511200 | 389.1.2.0 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain | 0.75 | 56.0 | 4.96e-01 | 79.7% | 62.4% |
| 4960839 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 54.0 | 4.56e-01 | 81.4% | 51.0% |
| 3452325 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.71 | 62.0 | 4.20e-01 | 96.6% | 35.0% |
| 5051418 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.69 | 59.0 | 4.65e-01 | 100.0% | 87.4% |
| 4348606 | 4.1.1.440 ↗ | beta barrels › SH3 › SH3 › SH3 › PF27165 | 0.68 | 54.0 | 5.29e-01 | 88.1% | 81.5% |
| 3254426 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.68 | 52.0 | 3.91e-01 | 100.0% | 35.6% |
| 4540629 | 5.1.3.179 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Sortilin-Vps10 | 0.68 | 53.0 | 2.88e-01 | 84.7% | 78.5% |
| 4994722 | 5.1.11.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed | 0.68 | 55.0 | 3.36e-01 | 88.1% | 25.8% |
| 3624687 | 64.1.1.9 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW_TCERG1 | 0.68 | 52.0 | 5.49e-01 | 100.0% | 98.0% |
| 4145162 | 5.1.11.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed | 0.67 | 56.0 | 3.44e-01 | 91.5% | 66.8% |
| 4027309 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.67 | 52.0 | 4.51e-01 | 84.7% | 98.9% |
| 3264341 | 5.1.4.147 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RMC1_N | 0.67 | 53.0 | 3.28e-01 | 86.4% | 40.6% |
| 4528716 | 3784.1.1.0 ↗ | a+b two layers › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related | 0.67 | 51.0 | 4.33e-01 | 86.4% | 53.3% |
| 5054507 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 49.0 | 4.53e-01 | 79.7% | 66.7% |
| 5014898 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.66 | 56.0 | 3.35e-01 | 96.6% | 79.8% |
| 1100 | 10.1.1.32 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Sial-lect-inser | 0.65 | 56.0 | 3.90e-01 | 96.6% | 51.3% |
| 3613168 | 5.1.3.28 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 | 0.65 | 56.0 | 3.38e-01 | 96.6% | 41.0% |
| 3235525 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.65 | 56.0 | 3.94e-01 | 100.0% | 35.5% |
| 3765955 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.65 | 57.0 | 3.35e-01 | 98.3% | 47.0% |
| 5033075 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 47.0 | 4.83e-01 | 89.8% | 85.5% |
| 2034120 | 5.1.3.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › CyRPA | 0.64 | 55.0 | 3.44e-01 | 96.6% | 54.1% |
| 4971601 | 241.14.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › SARS-unique domain-C › SARS-unique domain-C | 0.64 | 48.0 | 4.57e-01 | 83.1% | 71.4% |
| 3266702 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.63 | 55.0 | 4.76e-01 | 100.0% | 86.0% |
| 5013260 | 3459.1.1.0 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule | 0.63 | 50.0 | 4.73e-01 | 91.5% | 100.0% |
| 3211804 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.63 | 54.0 | 3.56e-01 | 100.0% | 26.9% |
| 4992872 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 46.0 | 4.74e-01 | 91.5% | 87.3% |
| 169882 | 10.1.1.32 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Sial-lect-inser | 0.63 | 56.0 | 3.90e-01 | 100.0% | 51.8% |
| 3276359 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.63 | 54.0 | 3.33e-01 | 96.6% | 42.4% |
| 3597338 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.62 | 53.0 | 3.69e-01 | 96.6% | 54.1% |
| 3807776 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.62 | 55.0 | 3.44e-01 | 100.0% | 23.4% |
| 3519803 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.62 | 54.0 | 3.84e-01 | 100.0% | 74.2% |
| 3280222 | 9.4.1.5 ↗ | beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains › DUF7586 | 0.62 | 51.0 | 4.53e-01 | 91.5% | 94.1% |
| 3278853 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 49.0 | 4.79e-01 | 86.4% | 84.6% |
| 2794515 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.62 | 49.0 | 3.01e-01 | 89.8% | 30.3% |
| 4017784 | 5.1.3.172 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF26607 | 0.62 | 53.0 | 3.34e-01 | 96.6% | 59.0% |
| 4408024 | 325.1.7.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C | 0.62 | 39.0 | 3.95e-01 | 71.2% | 63.3% |
| 3613171 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.62 | 53.0 | 3.71e-01 | 96.6% | 57.4% |
| 5017214 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 47.0 | 4.83e-01 | 91.5% | 90.9% |
| 3314307 | 5.1.3.65 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 | 0.61 | 55.0 | 3.38e-01 | 100.0% | 58.3% |
| 4380184 | 9.11.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like › MliC | 0.61 | 49.0 | 4.33e-01 | 91.5% | 100.0% |
| 3816768 | 5.1.4.550 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 | 0.61 | 49.0 | 3.20e-01 | 91.5% | 62.5% |
| 3788007 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.61 | 54.0 | 3.17e-01 | 100.0% | 31.8% |
| None | — | 0.60 | 54.0 | 3.45e-01 | 100.0% | 21.1% | |
| 4990212 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 44.0 | 4.49e-01 | 91.5% | 87.3% |
| 3877056 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.60 | 54.0 | 3.41e-01 | 100.0% | 21.5% |
| 1547989 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.60 | 51.0 | 3.17e-01 | 96.6% | 33.6% |
| 3251013 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.60 | 53.0 | 3.26e-01 | 100.0% | 16.6% |
| 4583471 | 5.1.4.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 | 0.60 | 53.0 | 3.42e-01 | 100.0% | 20.8% |
| 4024671 | 4041.1.1.0 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase | 0.60 | 50.0 | 3.72e-01 | 100.0% | 83.9% |
| 3712663 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.60 | 47.0 | 4.03e-01 | 86.4% | 100.0% |
| 3392393 | 5.1.4.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1 | 0.59 | 51.0 | 3.13e-01 | 96.6% | 29.2% |
| 3743052 | 5.1.4.78 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › TFIIIC_delta | 0.59 | 51.0 | 3.07e-01 | 100.0% | 30.0% |
| 5035552 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 51.0 | 3.42e-01 | 100.0% | 27.3% |
| 4950396 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 42.0 | 4.36e-01 | 91.5% | 83.6% |
| 3917776 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.59 | 51.0 | 3.24e-01 | 98.3% | 30.3% |
| 4030008 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 52.0 | 3.26e-01 | 100.0% | 26.3% |
| 3172856 | 5.1.4.575 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30290 | 0.58 | 52.0 | 3.33e-01 | 100.0% | 21.1% |
| 3810782 | 5.1.5.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF295 | 0.58 | 50.0 | 3.12e-01 | 96.6% | 69.7% |
| 3631132 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.58 | 50.0 | 3.09e-01 | 100.0% | 19.2% |
| 4952887 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 43.0 | 4.43e-01 | 89.8% | 89.1% |
| 3830390 | 5.1.3.65 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 | 0.58 | 51.0 | 3.22e-01 | 100.0% | 18.7% |
| 4980592 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 50.0 | 2.92e-01 | 98.3% | 19.8% |
| 3925946 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 49.0 | 3.07e-01 | 100.0% | 20.8% |
| 3800238 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.57 | 51.0 | 3.41e-01 | 100.0% | 69.6% |
| 4962256 | 101.1.2.937 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF25943 | 0.57 | 48.0 | 3.97e-01 | 96.6% | 72.7% |
| 3784883 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 42.0 | 2.72e-01 | 83.1% | 36.3% |
| 3938904 | 3794.1.1.0 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit | 0.57 | 45.0 | 3.56e-01 | 91.5% | 65.2% |
| 3207356 | 10.1.1.22 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › DUF1349 | 0.57 | 49.0 | 3.39e-01 | 96.6% | 70.5% |
| 5025079 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 42.0 | 4.36e-01 | 98.3% | 92.7% |
| 3832937 | 5.1.3.65 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 | 0.56 | 48.0 | 3.04e-01 | 100.0% | 29.6% |
| 3384630 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.55 | 48.0 | 3.19e-01 | 100.0% | 39.6% |
| 3926396 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 47.0 | 2.99e-01 | 98.3% | 45.6% |
| 3505139 | 5.1.12.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › PERK and Ire1 luminal domains | 0.55 | 48.0 | 3.06e-01 | 100.0% | 40.0% |
| 3957366 | 5.1.3.23 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL | 0.53 | 45.0 | 2.98e-01 | 100.0% | 21.4% |
| 3587270 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 38.0 | 3.20e-01 | 79.7% | 50.4% |
| 3201539 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 46.0 | 3.24e-01 | 100.0% | 30.5% |
| 3813307 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.53 | 42.0 | 2.72e-01 | 96.6% | 67.4% |
| 3174977 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.52 | 48.0 | 3.97e-01 | 98.3% | 82.1% |
| 3622645 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.51 | 39.0 | 3.44e-01 | 96.6% | 54.7% |
D2
high
residues 534-628
Domain cluster:
rep: SRR1747018_scaffold_2_1202_curated_prodigal-single.1__X__X__00319__D987-1069
Pfam (4)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13180.13 best | PDZ_2 | 88.3 | 4.40e-25 | 97.9% | 97.5% |
| PF00595.30 | PDZ | 44.2 | 2.80e-11 | 84.2% | 72.8% |
| PF14685.15 | PDZ_Tricorn | 26.3 | 9.10e-06 | 75.8% | 65.3% |
| PF17820.8 | PDZ_6 | 49.5 | 4.00e-13 | 57.9% | 100.0% |
CATH (67)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6iccA02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.97 | 70.0 | 7.38e-01 | 92.6% | 81.4% |
| 1y8tA03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.96 | 83.0 | 8.70e-01 | 100.0% | 96.6% |
| 4yo1A03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.94 | 91.0 | 9.11e-01 | 100.0% | 100.0% |
| 6ieoA03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.93 | 81.0 | 8.17e-01 | 100.0% | 91.5% |
| 7co7D03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.93 | 87.0 | 8.81e-01 | 100.0% | 100.0% |
| 2zpmA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.92 | 64.0 | 6.80e-01 | 72.6% | 79.1% |
| 2p3wB01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.92 | 83.0 | 8.29e-01 | 100.0% | 92.7% |
| 4fgmA03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.92 | 76.0 | 7.34e-01 | 100.0% | 78.6% |
| 5t69A02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.90 | 86.0 | 8.25e-01 | 100.0% | 94.3% |
| 1ky9B03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.89 | 83.0 | 8.35e-01 | 100.0% | 97.9% |
| 3pv2A03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.88 | 78.0 | 8.10e-01 | 96.8% | 100.0% |
| 2zplB00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.88 | 68.0 | 6.91e-01 | 92.6% | 80.9% |
| 3rleA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.88 | 68.0 | 6.57e-01 | 80.0% | 76.9% |
| 5m3nA03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.87 | 83.0 | 8.28e-01 | 100.0% | 100.0% |
| 2kjkA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.87 | 64.0 | 6.35e-01 | 77.9% | 73.0% |
| 4c2dA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.86 | 74.0 | 7.50e-01 | 100.0% | 91.4% |
| 1te0A03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.86 | 81.0 | 7.96e-01 | 100.0% | 94.0% |
| 4edjA02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.86 | 62.0 | 6.16e-01 | 74.7% | 73.5% |
| 3qo6A03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.85 | 82.0 | 7.97e-01 | 100.0% | 98.0% |
| 2hgaA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.85 | 59.0 | 6.26e-01 | 89.5% | 80.0% |
| 5f67B00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.85 | 64.0 | 6.42e-01 | 87.4% | 77.3% |
| 4jj0B00 | 2.30.42.60 | Mainly Beta › Roll › Pdz3 Domain › | 0.85 | 78.0 | 6.21e-01 | 98.9% | 52.8% |
| 1r6jA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.85 | 58.0 | 6.24e-01 | 88.4% | 81.7% |
| 2kbsA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.84 | 62.0 | 6.36e-01 | 88.4% | 79.3% |
| 4l8nA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.84 | 75.0 | 7.59e-01 | 100.0% | 95.7% |
| 1n99A01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.83 | 60.0 | 6.47e-01 | 87.4% | 86.6% |
| 7xs0A01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.83 | 69.0 | 7.36e-01 | 90.5% | 100.0% |
| 1fc6A02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.83 | 74.0 | 7.50e-01 | 100.0% | 96.7% |
| 7w6zA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.83 | 64.0 | 6.46e-01 | 91.6% | 80.9% |
| 1m5zA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.82 | 62.0 | 6.33e-01 | 88.4% | 81.3% |
| 1vaeA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.82 | 60.0 | 5.69e-01 | 88.4% | 64.9% |
| 3o46A00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.81 | 60.0 | 6.38e-01 | 87.4% | 86.9% |
| 3tswB01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.81 | 60.0 | 6.10e-01 | 88.4% | 78.7% |
| 3wkmB01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.81 | 66.0 | 6.68e-01 | 93.7% | 86.2% |
| 1ky9B04 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.81 | 57.0 | 6.51e-01 | 86.3% | 100.0% |
| 2rczA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.80 | 49.0 | 6.10e-01 | 73.7% | 100.0% |
| 1ihjA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.80 | 64.0 | 6.52e-01 | 87.4% | 85.1% |
| 5tytA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.80 | 58.0 | 6.06e-01 | 88.4% | 80.9% |
| 3qikA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.80 | 59.0 | 6.29e-01 | 88.4% | 88.1% |
| 4o06A00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.79 | 62.0 | 6.04e-01 | 81.1% | 85.3% |
| 2v90C00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.79 | 62.0 | 6.34e-01 | 88.4% | 84.9% |
| 2eaqA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.79 | 58.0 | 6.00e-01 | 88.4% | 82.0% |
| 1k32A04 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.78 | 71.0 | 7.15e-01 | 100.0% | 95.8% |
| 2l97A01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.78 | 73.0 | 7.19e-01 | 100.0% | 99.0% |
| 2kjpA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.78 | 55.0 | 5.99e-01 | 93.7% | 88.6% |
| 6sakC00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.78 | 63.0 | 6.40e-01 | 86.3% | 91.6% |
| 6eziA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.78 | 59.0 | 6.19e-01 | 87.4% | 87.2% |
| 2z17A00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.78 | 62.0 | 6.31e-01 | 85.3% | 85.1% |
| 2kv8A00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.77 | 57.0 | 6.07e-01 | 88.4% | 88.0% |
| 1whdA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.77 | 57.0 | 5.60e-01 | 88.4% | 73.0% |
| 2dluA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.77 | 59.0 | 5.61e-01 | 89.5% | 69.4% |
| 4xhvA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.75 | 60.0 | 6.07e-01 | 86.3% | 84.0% |
| 2i6vA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.75 | 65.0 | 6.77e-01 | 97.9% | 100.0% |
| 2eeiA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.74 | 59.0 | 5.66e-01 | 89.5% | 74.5% |
| 3k1rA02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.74 | 58.0 | 5.45e-01 | 88.4% | 69.4% |
| 2ejyA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.74 | 55.0 | 5.82e-01 | 88.4% | 87.1% |
| 5ovpA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.74 | 62.0 | 6.21e-01 | 88.4% | 91.7% |
| 1rgwA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.73 | 54.0 | 5.73e-01 | 88.4% | 87.1% |
| 3k50A02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.73 | 67.0 | 6.60e-01 | 100.0% | 93.0% |
| 2d8iA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.72 | 55.0 | 5.70e-01 | 89.5% | 86.4% |
| 2kqfA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.72 | 61.0 | 6.09e-01 | 89.5% | 88.5% |
| 4ghnA02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.70 | 66.0 | 6.37e-01 | 100.0% | 92.4% |
| 2yuyA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.68 | 57.0 | 5.11e-01 | 88.4% | 81.0% |
| 3zleA03 | 2.10.70.70 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.68 | 29.0 | 4.19e-01 | 81.1% | 94.9% |
| 1v43A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 32.0 | 3.83e-01 | 95.8% | 70.3% |
| 3g1jA00 | 2.30.30.350 | Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. | 0.57 | 39.0 | 4.01e-01 | 93.7% | 73.3% |
| 3irpX01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 40.0 | 3.41e-01 | 84.2% | 98.0% |
ECOD (100)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5083368 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.98 | 71.0 | 6.79e-01 | 80.0% | 66.7% |
| 3839472 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.97 | 92.0 | 8.79e-01 | 100.0% | 87.6% |
| 3945198 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.97 | 91.0 | 9.18e-01 | 97.9% | 96.8% |
| 4939746 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.97 | 94.0 | 8.85e-01 | 100.0% | 96.4% |
| 4378590 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.97 | 92.0 | 8.79e-01 | 98.9% | 88.6% |
| 5047157 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.97 | 91.0 | 9.12e-01 | 98.9% | 96.8% |
| 3967009 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.97 | 92.0 | 8.68e-01 | 100.0% | 85.5% |
| 4986682 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.96 | 71.0 | 7.56e-01 | 90.5% | 84.7% |
| 5033889 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.96 | 92.0 | 9.05e-01 | 100.0% | 94.0% |
| 4406055 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.96 | 92.0 | 9.03e-01 | 100.0% | 94.0% |
| 5000812 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.96 | 72.0 | 7.42e-01 | 88.4% | 81.1% |
| 5006741 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.96 | 72.0 | 7.40e-01 | 76.8% | 85.6% |
| 3710124 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.96 | 80.0 | 8.28e-01 | 100.0% | 91.1% |
| 5004010 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.96 | 73.0 | 7.39e-01 | 78.9% | 80.0% |
| 4933420 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.96 | 92.0 | 9.21e-01 | 100.0% | 98.9% |
| None | — | 0.95 | 82.0 | 8.46e-01 | 100.0% | 93.3% | |
| 5011018 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.95 | 90.0 | 9.03e-01 | 100.0% | 97.9% |
| 5000198 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.95 | 90.0 | 9.06e-01 | 98.9% | 97.9% |
| 4931081 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.95 | 71.0 | 6.33e-01 | 87.4% | 58.4% |
| 3596413 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.95 | 79.0 | 8.18e-01 | 100.0% | 91.1% |
| 5018149 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.95 | 73.0 | 7.32e-01 | 78.9% | 83.2% |
| 3386905 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.95 | 88.0 | 8.49e-01 | 100.0% | 87.6% |
| 4988505 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.95 | 92.0 | 8.36e-01 | 100.0% | 92.4% |
| 3956605 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.95 | 81.0 | 8.14e-01 | 100.0% | 88.4% |
| 4938770 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.95 | 72.0 | 7.05e-01 | 88.4% | 74.0% |
| 5065268 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.94 | 90.0 | 8.84e-01 | 100.0% | 94.0% |
| 1562805 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.94 | 91.0 | 8.17e-01 | 100.0% | 77.9% |
| 4928428 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.94 | 87.0 | 8.32e-01 | 95.8% | 100.0% |
| 3588917 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.94 | 90.0 | 8.69e-01 | 100.0% | 96.2% |
| 5012619 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.94 | 70.0 | 7.24e-01 | 88.4% | 81.1% |
| 4182137 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.94 | 90.0 | 8.51e-01 | 100.0% | 92.7% |
| 4967628 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.94 | 68.0 | 7.22e-01 | 74.7% | 90.6% |
| 4949343 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.93 | 70.0 | 6.13e-01 | 90.5% | 56.2% |
| 4267258 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.93 | 85.0 | 8.58e-01 | 96.8% | 95.8% |
| 3839715 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.93 | 75.0 | 7.99e-01 | 100.0% | 94.1% |
| 4237621 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.93 | 87.0 | 8.56e-01 | 97.9% | 97.0% |
| 4972857 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.92 | 72.0 | 6.18e-01 | 87.4% | 55.0% |
| 4955256 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.92 | 87.0 | 8.73e-01 | 100.0% | 98.9% |
| 4969013 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.92 | 73.0 | 6.33e-01 | 87.4% | 57.8% |
| 3166282 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.91 | 78.0 | 8.23e-01 | 98.9% | 98.8% |
| 4154083 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.91 | 87.0 | 8.40e-01 | 100.0% | 93.3% |
| None | — | 0.91 | 84.0 | 8.24e-01 | 96.8% | 97.0% | |
| 1312474 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.91 | 82.0 | 7.32e-01 | 95.8% | 70.9% |
| 4530514 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.91 | 67.0 | 6.58e-01 | 93.7% | 72.0% |
| 5024676 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.91 | 69.0 | 6.75e-01 | 85.3% | 74.0% |
| 3493512 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.91 | 87.0 | 8.33e-01 | 100.0% | 93.3% |
| 4542794 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.91 | 87.0 | 8.38e-01 | 100.0% | 95.2% |
| 4645002 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.90 | 86.0 | 8.34e-01 | 100.0% | 95.2% |
| 4967626 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.90 | 69.0 | 6.82e-01 | 88.4% | 75.0% |
| 3429748 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.90 | 86.0 | 8.29e-01 | 100.0% | 95.2% |
| 3719137 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.90 | 75.0 | 7.98e-01 | 97.9% | 97.6% |
| 4351213 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.90 | 79.0 | 7.98e-01 | 96.8% | 92.6% |
| 4414389 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.90 | 86.0 | 8.32e-01 | 100.0% | 93.3% |
| 5054965 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.90 | 71.0 | 6.48e-01 | 89.5% | 65.0% |
| 4194904 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.89 | 79.0 | 7.96e-01 | 96.8% | 92.6% |
| 5003948 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.89 | 72.0 | 6.76e-01 | 88.4% | 71.8% |
| 5003947 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.89 | 71.0 | 5.89e-01 | 84.2% | 52.0% |
| 4245545 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.89 | 79.0 | 7.48e-01 | 97.9% | 80.9% |
| 4137635 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.89 | 85.0 | 8.18e-01 | 100.0% | 97.1% |
| 4986681 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.89 | 68.0 | 5.66e-01 | 84.2% | 49.0% |
| 1562781 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.89 | 78.0 | 7.38e-01 | 96.8% | 79.3% |
| 2728018 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.88 | 82.0 | 7.98e-01 | 100.0% | 90.4% |
| 3704152 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.88 | 74.0 | 7.85e-01 | 97.9% | 98.8% |
| 3711754 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.88 | 80.0 | 7.42e-01 | 100.0% | 78.3% |
| 4950610 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.88 | 85.0 | 8.31e-01 | 100.0% | 96.0% |
| 4224553 | 7.1.1.12 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_1 | 0.88 | 82.0 | 7.01e-01 | 98.9% | 66.4% |
| 166194 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.87 | 84.0 | 7.88e-01 | 100.0% | 86.4% |
| 5004009 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.87 | 67.0 | 7.09e-01 | 78.9% | 89.4% |
| 3175976 | 7.1.1.12 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_1 | 0.87 | 81.0 | 7.40e-01 | 98.9% | 77.5% |
| 4562453 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.87 | 68.0 | 6.65e-01 | 92.6% | 76.0% |
| 4112294 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.87 | 80.0 | 7.95e-01 | 100.0% | 93.9% |
| None | — | 0.87 | 84.0 | 8.06e-01 | 100.0% | 95.2% | |
| 3816592 | 7.1.1.12 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_1 | 0.87 | 81.0 | 7.18e-01 | 98.9% | 73.1% |
| None | — | 0.87 | 83.0 | 8.00e-01 | 100.0% | 96.2% | |
| 135643 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.86 | 65.0 | 6.77e-01 | 78.9% | 85.1% |
| 4055478 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.86 | 78.0 | 7.88e-01 | 96.8% | 97.9% |
| 4958484 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.86 | 82.0 | 8.09e-01 | 100.0% | 96.0% |
| 4644244 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.86 | 72.0 | 7.36e-01 | 96.8% | 90.3% |
| 5017398 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.86 | 65.0 | 6.74e-01 | 91.6% | 83.3% |
| 5073769 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.85 | 81.0 | 7.99e-01 | 100.0% | 96.0% |
| 3284184 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.85 | 79.0 | 7.94e-01 | 97.9% | 96.8% |
| 3278361 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.85 | 68.0 | 6.85e-01 | 100.0% | 83.2% |
| 4934447 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.85 | 68.0 | 5.77e-01 | 84.2% | 54.5% |
| 3953158 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.85 | 70.0 | 6.13e-01 | 90.5% | 62.3% |
| 167604 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.85 | 79.0 | 7.49e-01 | 100.0% | 87.4% |
| 3288609 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.84 | 69.0 | 6.69e-01 | 90.5% | 77.1% |
| 4199561 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.84 | 78.0 | 7.23e-01 | 100.0% | 80.0% |
| 2774636 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.84 | 77.0 | 7.75e-01 | 96.8% | 100.0% |
| 4962965 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.83 | 74.0 | 6.14e-01 | 92.6% | 84.7% |
| 3744351 | 7.1.1.12 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_1 | 0.83 | 75.0 | 7.04e-01 | 98.9% | 80.9% |
| 3306780 | 7.1.1.12 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_1 | 0.82 | 76.0 | 6.84e-01 | 98.9% | 76.0% |
| 4584785 | 7.1.1.12 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_1 | 0.82 | 75.0 | 6.60e-01 | 98.9% | 71.1% |
| 184762 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.78 | 73.0 | 6.53e-01 | 100.0% | 77.2% |
| 4007876 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.78 | 68.0 | 6.71e-01 | 98.9% | 88.0% |
| 136205 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.78 | 55.0 | 5.88e-01 | 93.7% | 84.3% |
| 3988186 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.77 | 68.0 | 6.12e-01 | 92.6% | 76.8% |
| 4479761 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.75 | 66.0 | 6.50e-01 | 100.0% | 88.0% |
| 3408812 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.75 | 69.0 | 6.85e-01 | 98.9% | 95.0% |
| 4007430 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.73 | 64.0 | 6.59e-01 | 100.0% | 100.0% |
| 3931541 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.65 | 56.0 | 5.72e-01 | 100.0% | 98.9% |
D3
medium
residues 316-413
Domain cluster:
rep: hypothetical_protein_1__YP_009336648__Shahe_heteroptera_virus_4__1923420__D768-848
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13365.13 best | Trypsin_2 | 38.7 | 2.40e-09 | 66.3% | 43.5% |
CATH (48)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4yo1A01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.92 | 75.0 | 7.89e-01 | 100.0% | 92.1% |
| 3otpA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.92 | 74.0 | 5.62e-01 | 100.0% | 40.4% |
| 2z9iC01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.91 | 78.0 | 8.06e-01 | 100.0% | 93.5% |
| 3k6yA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.91 | 73.0 | 7.54e-01 | 100.0% | 88.0% |
| 3stjA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.90 | 70.0 | 7.54e-01 | 92.9% | 91.8% |
| 4rqyA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.90 | 79.0 | 7.14e-01 | 100.0% | 71.5% |
| 4ri0A01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.89 | 79.0 | 5.97e-01 | 100.0% | 44.9% |
| 2w5eA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.89 | 58.0 | 7.04e-01 | 92.9% | 100.0% |
| 5y2dA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.88 | 69.0 | 6.40e-01 | 100.0% | 66.7% |
| 3nziA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.87 | 76.0 | 7.42e-01 | 100.0% | 84.0% |
| 5hmaA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.86 | 72.0 | 7.63e-01 | 100.0% | 97.7% |
| 1l1jA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.81 | 78.0 | 7.23e-01 | 100.0% | 91.5% |
| 4ic6C01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.81 | 76.0 | 7.26e-01 | 100.0% | 87.3% |
| 1a5iA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.73 | 65.0 | 6.06e-01 | 93.9% | 89.0% |
| 5lhrA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.72 | 64.0 | 5.98e-01 | 93.9% | 89.7% |
| 2o8mB01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.72 | 46.0 | 5.43e-01 | 94.9% | 95.5% |
| 1fiwA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.72 | 63.0 | 5.87e-01 | 93.9% | 88.3% |
| 1qa7A01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.71 | 64.0 | 6.13e-01 | 100.0% | 86.4% |
| 2ok5A02 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.71 | 61.0 | 4.60e-01 | 91.8% | 44.7% |
| 1dleA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.69 | 64.0 | 5.81e-01 | 100.0% | 84.5% |
| 2r0lA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.69 | 61.0 | 5.82e-01 | 93.9% | 87.6% |
| 2oq5A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.69 | 60.0 | 5.95e-01 | 93.9% | 87.5% |
| 5eokA05 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.68 | 63.0 | 4.72e-01 | 100.0% | 48.7% |
| 6r2wH02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.68 | 60.0 | 5.80e-01 | 93.9% | 86.4% |
| 1eq9A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.68 | 60.0 | 5.90e-01 | 93.9% | 87.6% |
| 2dpyA00 | 3.40.50.12240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.67 | 43.0 | 2.83e-01 | 78.6% | 15.2% |
| 4q63A00 | 2.40.10.430 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.67 | 51.0 | 5.25e-01 | 96.9% | 84.9% |
| 2iabA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.64 | 55.0 | 4.83e-01 | 92.9% | 87.4% |
| 4rt0A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.64 | 56.0 | 5.44e-01 | 96.9% | 85.3% |
| 1krhA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.63 | 44.0 | 4.42e-01 | 71.4% | 86.6% |
| 2xzlA02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.63 | 42.0 | 4.66e-01 | 85.7% | 86.1% |
| 2furB00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 53.0 | 4.26e-01 | 92.9% | 70.0% |
| 2i02A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 52.0 | 4.65e-01 | 92.9% | 89.3% |
| 3ec6A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 52.0 | 4.81e-01 | 93.9% | 91.4% |
| 6k2lA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 43.0 | 4.20e-01 | 73.5% | 87.4% |
| 4i86A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.61 | 52.0 | 5.15e-01 | 93.9% | 89.2% |
| 2f1lA01 | 2.40.30.60 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM | 0.58 | 41.0 | 4.30e-01 | 80.6% | 82.0% |
| 1wxrA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.57 | 53.0 | 3.80e-01 | 100.0% | 39.3% |
| 2cuiA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 39.0 | 3.76e-01 | 74.5% | 63.4% |
| 3sz6A00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 43.0 | 4.10e-01 | 88.8% | 71.6% |
| 3su0A01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.54 | 48.0 | 4.61e-01 | 100.0% | 83.9% |
| 1zq7A01 | 3.30.700.20 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Hypothetical protein ph0010; domain 1 | 0.54 | 41.0 | 3.72e-01 | 86.7% | 61.4% |
| 2iteA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 46.0 | 4.31e-01 | 95.9% | 99.2% |
| 1vw4X00 | 2.20.28.120 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › Ribosomal protein L33 | 0.52 | 30.0 | 3.51e-01 | 92.9% | 84.4% |
| 5z0uA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 40.0 | 3.79e-01 | 84.7% | 95.2% |
| 2kcaA00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.51 | 41.0 | 4.02e-01 | 90.8% | 95.4% |
| 4mypA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 43.0 | 4.06e-01 | 93.9% | 95.9% |
| 1avwB00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.50 | 37.0 | 3.10e-01 | 76.5% | 92.4% |
ECOD (72)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1308507 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.93 | 76.0 | 5.87e-01 | 100.0% | 43.9% |
| 3284172 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.93 | 71.0 | 5.36e-01 | 100.0% | 37.6% |
| 3284072 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.92 | 77.0 | 5.57e-01 | 100.0% | 35.6% |
| 140973 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.91 | 73.0 | 5.32e-01 | 100.0% | 35.7% |
| 3280955 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.90 | 75.0 | 5.53e-01 | 100.0% | 37.8% |
| 3532116 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.89 | 79.0 | 5.83e-01 | 100.0% | 41.4% |
| 4169622 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.89 | 78.0 | 5.75e-01 | 100.0% | 40.5% |
| 3950281 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.89 | 75.0 | 5.47e-01 | 100.0% | 37.8% |
| 3957702 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.89 | 74.0 | 6.51e-01 | 100.0% | 63.0% |
| 3448106 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.89 | 73.0 | 5.21e-01 | 100.0% | 33.6% |
| 398505 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.88 | 79.0 | 5.72e-01 | 100.0% | 39.5% |
| 4600945 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.86 | 79.0 | 5.83e-01 | 100.0% | 42.3% |
| 3464880 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.86 | 73.0 | 5.43e-01 | 100.0% | 40.0% |
| 3659932 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.86 | 83.0 | 5.90e-01 | 100.0% | 46.0% |
| 4338510 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.86 | 72.0 | 5.34e-01 | 100.0% | 39.5% |
| 3843527 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.85 | 80.0 | 5.84e-01 | 100.0% | 42.2% |
| 3429729 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.83 | 77.0 | 5.90e-01 | 100.0% | 47.7% |
| 3647453 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.83 | 80.0 | 5.61e-01 | 100.0% | 48.1% |
| 3428387 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.83 | 76.0 | 6.01e-01 | 100.0% | 52.2% |
| 3468829 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.83 | 79.0 | 5.64e-01 | 100.0% | 43.1% |
| 3251320 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.82 | 76.0 | 5.41e-01 | 100.0% | 37.6% |
| 3420143 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.81 | 75.0 | 6.21e-01 | 100.0% | 59.4% |
| 4028981 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.81 | 75.0 | 5.58e-01 | 100.0% | 43.2% |
| 3435448 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.81 | 74.0 | 5.36e-01 | 100.0% | 39.5% |
| 4683578 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.81 | 78.0 | 5.70e-01 | 100.0% | 49.3% |
| 3420315 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.80 | 73.0 | 5.60e-01 | 100.0% | 47.0% |
| 3611892 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.80 | 64.0 | 5.04e-01 | 100.0% | 43.2% |
| 4939745 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.80 | 73.0 | 5.39e-01 | 100.0% | 42.3% |
| 4173923 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.80 | 76.0 | 5.49e-01 | 100.0% | 41.3% |
| 4324118 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.80 | 77.0 | 5.51e-01 | 100.0% | 48.3% |
| 4166426 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.80 | 77.0 | 5.35e-01 | 100.0% | 46.4% |
| 3739220 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.80 | 70.0 | 5.22e-01 | 100.0% | 41.9% |
| 3281996 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.79 | 66.0 | 5.04e-01 | 96.9% | 41.0% |
| 3462061 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.79 | 75.0 | 5.63e-01 | 100.0% | 46.0% |
| 3436414 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.79 | 72.0 | 5.47e-01 | 100.0% | 45.2% |
| 3948218 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.78 | 76.0 | 5.39e-01 | 100.0% | 44.1% |
| 3417330 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.78 | 72.0 | 5.44e-01 | 100.0% | 44.7% |
| 4441614 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.78 | 75.0 | 5.31e-01 | 100.0% | 50.6% |
| 5053427 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.78 | 71.0 | 5.20e-01 | 100.0% | 39.6% |
| 3649347 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.78 | 74.0 | 6.36e-01 | 100.0% | 74.5% |
| 3464866 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.78 | 74.0 | 6.24e-01 | 100.0% | 68.7% |
| 3469033 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.78 | 74.0 | 5.28e-01 | 100.0% | 40.8% |
| 3816594 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.78 | 74.0 | 5.34e-01 | 100.0% | 42.9% |
| 3437290 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.77 | 73.0 | 5.49e-01 | 100.0% | 46.5% |
| 3443107 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.77 | 64.0 | 4.76e-01 | 100.0% | 37.8% |
| 3816110 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.77 | 73.0 | 5.41e-01 | 100.0% | 44.4% |
| 4028467 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.76 | 71.0 | 4.94e-01 | 100.0% | 34.9% |
| 3650249 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.74 | 70.0 | 5.05e-01 | 100.0% | 40.4% |
| 4205419 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.73 | 68.0 | 5.04e-01 | 100.0% | 45.7% |
| 261 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.72 | 64.0 | 4.93e-01 | 100.0% | 44.8% |
| 3580932 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.71 | 67.0 | 4.75e-01 | 100.0% | 37.7% |
| 3527303 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.70 | 65.0 | 4.67e-01 | 100.0% | 44.2% |
| 3411541 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.70 | 64.0 | 4.52e-01 | 98.0% | 48.6% |
| 3546733 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.68 | 63.0 | 4.58e-01 | 100.0% | 38.8% |
| 3748285 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.67 | 62.0 | 5.02e-01 | 100.0% | 56.7% |
| 3391188 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.67 | 63.0 | 4.60e-01 | 100.0% | 40.8% |
| 3534236 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.67 | 62.0 | 4.39e-01 | 100.0% | 42.9% |
| 3976283 | 1.1.13.32 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF1480 | 0.65 | 50.0 | 5.44e-01 | 88.8% | 100.0% |
| 3970225 | 1.1.13.68 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF27125 | 0.64 | 54.0 | 5.60e-01 | 92.9% | 98.9% |
| 4472606 | 1.1.13.55 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF4873 | 0.64 | 54.0 | 5.42e-01 | 96.9% | 91.0% |
| 3956293 | 1.1.5.75 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF4873 | 0.63 | 53.0 | 5.35e-01 | 96.9% | 90.0% |
| 3288253 | 1.1.13.55 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF4873 | 0.63 | 54.0 | 5.57e-01 | 93.9% | 100.0% |
| 3943844 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.63 | 52.0 | 5.21e-01 | 95.9% | 88.0% |
| 4246480 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.63 | 52.0 | 5.28e-01 | 95.9% | 91.6% |
| 3289582 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.63 | 52.0 | 4.68e-01 | 90.8% | 87.7% |
| 3947980 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.63 | 52.0 | 5.19e-01 | 95.9% | 88.0% |
| 4138546 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.58 | 42.0 | 4.36e-01 | 79.6% | 83.3% |
| 3658643 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.56 | 31.0 | 2.78e-01 | 79.6% | 35.9% |
| 3856644 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.53 | 39.0 | 3.78e-01 | 77.6% | 76.4% |
| 3228180 | 10.10.1.0 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.53 | 44.0 | 4.14e-01 | 92.9% | 100.0% |
| 1949981 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 30.0 | 3.51e-01 | 92.9% | 84.4% |
| 3662095 | 11.2.1.17 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › NT-C2 | 0.50 | 44.0 | 3.57e-01 | 98.0% | 75.8% |
D4
medium
residues 414-532
Domain cluster:
rep: IMGVR_UViG_3300005520_000196-3300005520-Ga0066864_100047611__D25-128
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00089.33 best | Trypsin | 57.0 | 3.60e-15 | 91.6% | 50.9% |
| PF13365.13 | Trypsin_2 | 62.0 | 1.50e-16 | 68.9% | 53.1% |