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SRR1747018_scaffold_2_1202_curated_prodigal-single.1__X__X__00255
Bact-VirSRR1747018_scaffold_2_1202_curated_prodigal-single.1__X__X__00255
Identity
- Kingdom:
- phage
Quality
57.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 71-233
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13208.12 best | TerB_N | 80.9 | 1.50e-22 | 91.4% | 65.7% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2guzB00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.66 | 26.0 | 4.03e-01 | 74.8% | 90.8% |
| 3ma5A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.63 | 35.0 | 4.64e-01 | 88.3% | 100.0% |
| 3mzkB03 | 1.20.58.940 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 25.0 | 3.52e-01 | 90.2% | 80.0% |
| 3a0oA02 | 1.50.10.100 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase | 0.58 | 44.0 | 3.44e-01 | 80.4% | 44.9% |
| 4i17A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 41.0 | 3.72e-01 | 73.0% | 64.7% |
| 2wviA00 | 1.25.40.430 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.53 | 37.0 | 3.82e-01 | 77.3% | 73.8% |
| 2qwoB00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.52 | 29.0 | 3.69e-01 | 80.4% | 94.6% |
| 4ikhA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 35.0 | 3.93e-01 | 97.5% | 89.0% |
| 2lahA00 | 1.25.40.430 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.51 | 39.0 | 3.99e-01 | 100.0% | 81.2% |
| 1pn9B02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.51 | 32.0 | 3.56e-01 | 97.5% | 76.9% |
| 4jgwA01 | 1.20.870.10 | Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 | 0.51 | 41.0 | 4.24e-01 | 100.0% | 89.7% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4003495 | 109.4.1.1328 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF26034 | 0.70 | 39.0 | 4.63e-01 | 95.1% | 78.3% |
| 3617532 | 109.4.1.235 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SRP68 | 0.67 | 43.0 | 3.66e-01 | 81.0% | 41.2% |
| 5018508 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.66 | 39.0 | 4.88e-01 | 97.5% | 98.9% |
| 3488551 | 109.4.1.844 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ZSWIM4-8_C | 0.61 | 47.0 | 4.46e-01 | 100.0% | 67.7% |
| 4479462 | 109.4.1.179 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nro1 | 0.58 | 43.0 | 4.05e-01 | 77.9% | 76.5% |
| 3177396 | 109.4.1.237 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Wap1 | 0.57 | 43.0 | 3.18e-01 | 77.3% | 33.2% |
| 3697513 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.54 | 47.0 | 3.94e-01 | 97.5% | 56.2% |
| 3834057 | 109.4.1.585 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF627 | 0.54 | 40.0 | 3.07e-01 | 97.5% | 35.2% |
| 3385242 | 109.4.1.257 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PDS5 | 0.54 | 44.0 | 3.84e-01 | 100.0% | 57.6% |
| 3183030 | 101.1.2.519 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7791 | 0.54 | 46.0 | 4.24e-01 | 90.8% | 88.8% |
| 3733192 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.54 | 49.0 | 3.48e-01 | 97.5% | 37.4% |
| 3818564 | 109.4.1.1317 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps53_N, VPS53_C | 0.53 | 39.0 | 2.82e-01 | 96.9% | 28.4% |
| 3793395 | 109.4.1.307 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Tho2 | 0.53 | 41.0 | 2.99e-01 | 81.0% | 89.6% |
| 3361462 | 109.4.1.359 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Exo70_C | 0.53 | 48.0 | 3.57e-01 | 97.5% | 88.9% |
| 3266434 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 48.0 | 4.02e-01 | 100.0% | 64.7% |
| 3495102 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.52 | 39.0 | 3.61e-01 | 78.5% | 96.7% |
| 4029310 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 49.0 | 3.06e-01 | 100.0% | 26.1% |
| 3531345 | 109.4.1.498 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF4487 | 0.52 | 48.0 | 4.52e-01 | 99.4% | 100.0% |
| 3800295 | 109.4.1.1472 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Tho2, Thoc2, THOC2_N | 0.51 | 43.0 | 2.70e-01 | 92.6% | 40.1% |
D2
medium
residues 234-293
D3
medium
residues 764-829