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SRR1747018_scaffold_2_1202_curated_prodigal-single.1__X__X__00290
Bact-VirSRR1747018_scaffold_2_1202_curated_prodigal-single.1__X__X__00290
Identity
- Kingdom:
- phage
Quality
80.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 427-558
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3a3jA02 | 2.60.410.10 | Mainly Beta › Sandwich › Peptidoglycan synthesis regulatory factor (PBP3), Domain 2 › D-Ala-D-Ala carboxypeptidase, C-terminal domain | 0.78 | 53.0 | 6.25e-01 | 78.8% | 98.9% |
| 4k91A02 | 2.60.410.10 | Mainly Beta › Sandwich › Peptidoglycan synthesis regulatory factor (PBP3), Domain 2 › D-Ala-D-Ala carboxypeptidase, C-terminal domain | 0.76 | 51.0 | 6.05e-01 | 78.8% | 98.9% |
| 3mfdA02 | 2.30.140.30 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › | 0.67 | 43.0 | 5.18e-01 | 75.0% | 97.7% |
| 1yocA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.63 | 42.0 | 4.10e-01 | 77.3% | 60.7% |
| 1c8uA02 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.63 | 39.0 | 4.14e-01 | 76.5% | 69.6% |
| 2hboA01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.57 | 37.0 | 3.76e-01 | 97.0% | 64.7% |
| 4kc5C03 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.55 | 40.0 | 3.12e-01 | 75.0% | 95.0% |
| 2cyeC00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.55 | 40.0 | 4.01e-01 | 82.6% | 75.0% |
| 5bp3B00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.54 | 38.0 | 3.02e-01 | 72.7% | 96.1% |
| 3kh8B01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.52 | 37.0 | 3.58e-01 | 78.8% | 64.3% |
| 1z54A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 39.0 | 3.94e-01 | 96.2% | 81.1% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3963822 | 51.1.1.1 ↗ | beta sandwiches › Penicillin-binding protein associated domain › Penicillin-binding protein associated domain › Penicillin-binding protein associated domain › PBP5_C | 0.78 | 52.0 | 6.24e-01 | 78.8% | 100.0% |
| 1101916 | 51.1.1.1 ↗ | beta sandwiches › Penicillin-binding protein associated domain › Penicillin-binding protein associated domain › Penicillin-binding protein associated domain › PBP5_C | 0.77 | 53.0 | 6.19e-01 | 82.6% | 98.9% |
| 4007301 | 51.1.1.1 ↗ | beta sandwiches › Penicillin-binding protein associated domain › Penicillin-binding protein associated domain › Penicillin-binding protein associated domain › PBP5_C | 0.76 | 52.0 | 6.03e-01 | 81.8% | 96.8% |
| 2462483 | 51.1.1.1 ↗ | beta sandwiches › Penicillin-binding protein associated domain › Penicillin-binding protein associated domain › Penicillin-binding protein associated domain › PBP5_C | 0.72 | 51.0 | 5.58e-01 | 81.8% | 88.8% |
| 3730835 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.67 | 30.0 | 3.49e-01 | 71.2% | 56.8% |
| 4683398 | 51.1.1.1 ↗ | beta sandwiches › Penicillin-binding protein associated domain › Penicillin-binding protein associated domain › Penicillin-binding protein associated domain › PBP5_C | 0.67 | 43.0 | 5.14e-01 | 75.8% | 95.6% |
| 3801650 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 32.0 | 3.87e-01 | 72.7% | 67.8% |
| 3500602 | 51.1.1.1 ↗ | beta sandwiches › Penicillin-binding protein associated domain › Penicillin-binding protein associated domain › Penicillin-binding protein associated domain › PBP5_C | 0.60 | 47.0 | 5.07e-01 | 81.8% | 98.2% |
| 3287846 | 222.1.1.5 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › FabA | 0.53 | 41.0 | 3.88e-01 | 100.0% | 68.4% |
| 3923766 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 31.0 | 3.36e-01 | 71.2% | 67.0% |
| 4644143 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.52 | 35.0 | 3.59e-01 | 76.5% | 70.0% |
| 4932446 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.52 | 37.0 | 3.85e-01 | 73.5% | 84.2% |
D2
medium
residues 149-195_314-332_358-426
Domain cluster:
rep: MT764845.1__QNN99764.1__P67b_00005__00005__D1-49_166-191_211-292
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00768.26 best | Peptidase_S11 | 36.0 | 7.60e-09 | 48.1% | 22.6% |
CATH (49)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1es2A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.95 | 80.0 | 6.18e-01 | 86.7% | 100.0% |
| 1xp4A01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.94 | 80.0 | 6.10e-01 | 87.4% | 100.0% |
| 3mfdA01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.93 | 77.0 | 6.12e-01 | 84.4% | 100.0% |
| 1nj4A01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.90 | 80.0 | 6.28e-01 | 91.9% | 98.4% |
| 2bcfA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.86 | 84.0 | 6.46e-01 | 100.0% | 97.3% |
| 3v3sA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.86 | 75.0 | 5.82e-01 | 91.9% | 100.0% |
| 3hunA01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.85 | 81.0 | 6.03e-01 | 98.5% | 100.0% |
| 3v39A01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.83 | 66.0 | 5.37e-01 | 83.0% | 94.1% |
| 7rlrA01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.80 | 66.0 | 5.30e-01 | 85.2% | 100.0% |
| 4hesA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.80 | 75.0 | 5.78e-01 | 99.3% | 98.2% |
| 3vskA03 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.78 | 72.0 | 5.13e-01 | 97.0% | 100.0% |
| 3cjmA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.77 | 71.0 | 5.67e-01 | 98.5% | 98.4% |
| 4iedA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.76 | 68.0 | 5.51e-01 | 94.8% | 99.2% |
| 1e3uD00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.76 | 69.0 | 5.55e-01 | 96.3% | 98.8% |
| 6nhsA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.75 | 69.0 | 5.55e-01 | 97.0% | 99.6% |
| 4e6xB00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.75 | 62.0 | 4.72e-01 | 88.1% | 99.3% |
| 1nrfA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.74 | 67.0 | 5.39e-01 | 96.3% | 96.7% |
| 3agdA01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.69 | 63.0 | 4.72e-01 | 97.0% | 98.1% |
| 1u60A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.68 | 62.0 | 4.66e-01 | 97.0% | 97.7% |
| 3ss3C02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.68 | 63.0 | 4.70e-01 | 99.3% | 98.1% |
| 6h5bB01 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.67 | 56.0 | 5.91e-01 | 100.0% | 100.0% |
| 1skoB00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.66 | 53.0 | 5.67e-01 | 97.8% | 100.0% |
| 1cqaA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.64 | 55.0 | 5.74e-01 | 97.0% | 100.0% |
| 7yh1A01 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.64 | 51.0 | 5.47e-01 | 95.6% | 99.1% |
| 1j3wC00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.64 | 57.0 | 5.74e-01 | 99.3% | 97.0% |
| 3tw8A01 | 3.30.450.200 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin module | 0.63 | 47.0 | 4.74e-01 | 84.4% | 76.8% |
| 2r55A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.62 | 43.0 | 3.71e-01 | 70.4% | 95.2% |
| 4qwoB00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.62 | 55.0 | 5.60e-01 | 99.3% | 99.2% |
| 1yprA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.61 | 52.0 | 5.43e-01 | 100.0% | 100.0% |
| 5x6vG00 | 3.30.450.190 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.61 | 55.0 | 5.56e-01 | 99.3% | 100.0% |
| 1d1jB00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.60 | 54.0 | 5.40e-01 | 98.5% | 100.0% |
| 3ix3A00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.58 | 51.0 | 4.83e-01 | 95.6% | 95.7% |
| 7r3eB02 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.58 | 50.0 | 4.69e-01 | 92.6% | 90.2% |
| 4wxaA00 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.58 | 26.0 | 3.21e-01 | 99.3% | 65.5% |
| 2jpiA00 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.57 | 32.0 | 3.72e-01 | 79.3% | 75.0% |
| 1s67L00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.57 | 42.0 | 4.48e-01 | 77.0% | 100.0% |
| 2xrnA02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.56 | 50.0 | 4.61e-01 | 99.3% | 92.1% |
| 5l09B00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.56 | 50.0 | 4.75e-01 | 99.3% | 96.3% |
| 3wa5B00 | 2.60.120.1690 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 46.0 | 4.75e-01 | 99.3% | 96.8% |
| 7cu8E01 | 3.40.1000.70 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain | 0.54 | 48.0 | 4.38e-01 | 97.8% | 97.8% |
| 2lnjA00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.54 | 46.0 | 4.27e-01 | 91.9% | 96.5% |
| 2f7lA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.54 | 30.0 | 3.61e-01 | 77.8% | 84.7% |
| 5l10B00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.53 | 48.0 | 4.43e-01 | 99.3% | 86.5% |
| 3hlzB01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.53 | 45.0 | 4.46e-01 | 91.1% | 97.9% |
| 4hjhA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.52 | 32.0 | 3.65e-01 | 80.7% | 81.2% |
| 1v2bB00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.52 | 43.0 | 4.17e-01 | 89.6% | 98.7% |
| 3dpuB03 | 3.30.310.200 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.51 | 30.0 | 3.33e-01 | 80.7% | 70.4% |
| 3o6qA02 | 3.30.70.2720 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 40.0 | 4.35e-01 | 91.1% | 100.0% |
| 5hwoA00 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.50 | 40.0 | 2.85e-01 | 85.2% | 72.5% |
ECOD (64)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3988421 | 223.3.1.2 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S11 | 0.92 | 82.0 | 7.79e-01 | 92.6% | 97.4% |
| 3291165 | 223.3.1.2 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S11 | 0.91 | 81.0 | 7.60e-01 | 91.9% | 92.5% |
| 3963814 | 223.3.1.2 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S11 | 0.89 | 81.0 | 7.86e-01 | 94.1% | 98.6% |
| 4358998 | 223.3.1.2 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S11 | 0.88 | 77.0 | 7.77e-01 | 90.4% | 98.5% |
| 3279858 | 223.3.1.2 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S11 | 0.87 | 82.0 | 6.94e-01 | 98.5% | 82.0% |
| 3970798 | 223.3.1.0 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins | 0.86 | 77.0 | 7.09e-01 | 91.9% | 86.0% |
| 3590843 | 223.3.1.2 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S11 | 0.86 | 80.0 | 7.65e-01 | 95.6% | 99.3% |
| 3975813 | 223.3.1.2 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S11 | 0.86 | 76.0 | 6.92e-01 | 91.9% | 83.5% |
| 3508639 | 223.3.1.2 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S11 | 0.84 | 74.0 | 7.25e-01 | 91.1% | 89.7% |
| 3965403 | 223.3.1.2 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S11 | 0.84 | 78.0 | 7.61e-01 | 97.0% | 97.2% |
| 3283393 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.79 | 71.0 | 5.00e-01 | 95.6% | 95.8% |
| 5016233 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.70 | 54.0 | 5.95e-01 | 95.6% | 100.0% |
| 5077539 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.70 | 58.0 | 6.16e-01 | 100.0% | 100.0% |
| 5048993 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.68 | 61.0 | 6.25e-01 | 99.3% | 100.0% |
| 4961195 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.67 | 52.0 | 5.61e-01 | 91.9% | 95.7% |
| 4029539 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.66 | 49.0 | 5.23e-01 | 98.5% | 86.7% |
| 5053230 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.66 | 55.0 | 5.77e-01 | 100.0% | 100.0% |
| 5051010 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.65 | 50.0 | 5.47e-01 | 98.5% | 100.0% |
| 5052577 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.64 | 57.0 | 5.79e-01 | 99.3% | 98.5% |
| 4947055 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.64 | 52.0 | 5.18e-01 | 85.9% | 82.1% |
| 5049089 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.64 | 51.0 | 5.42e-01 | 97.0% | 96.7% |
| 4946558 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.64 | 54.0 | 5.58e-01 | 100.0% | 98.4% |
| 3392243 | 223.2.1.19 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_1 | 0.64 | 49.0 | 4.81e-01 | 85.2% | 75.2% |
| 5047435 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.63 | 55.0 | 5.47e-01 | 99.3% | 91.0% |
| 3722450 | 223.2.1.10 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Gtr1_RagA | 0.63 | 57.0 | 5.59e-01 | 99.3% | 92.4% |
| 4927093 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.63 | 54.0 | 5.58e-01 | 98.5% | 99.2% |
| 3470353 | 223.2.1.1 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin | 0.62 | 55.0 | 5.61e-01 | 98.5% | 100.0% |
| 3238778 | 223.2.1.42 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Synaptobrevin | 0.62 | 49.0 | 4.29e-01 | 85.2% | 55.1% |
| 3365621 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.62 | 51.0 | 5.12e-01 | 97.0% | 88.1% |
| 4960515 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.62 | 49.0 | 5.20e-01 | 88.9% | 97.4% |
| 170167 | 223.2.1.1 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin | 0.62 | 56.0 | 5.52e-01 | 99.3% | 100.0% |
| 5077516 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.62 | 54.0 | 5.57e-01 | 99.3% | 100.0% |
| 4926836 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.62 | 53.0 | 5.47e-01 | 100.0% | 100.0% |
| 4028560 | 223.2.1.9 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Sedlin_N | 0.61 | 49.0 | 4.88e-01 | 85.9% | 83.2% |
| 6880 | 223.2.1.1 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin | 0.61 | 52.0 | 5.43e-01 | 100.0% | 100.0% |
| 3537449 | 223.2.1.1 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin | 0.61 | 53.0 | 5.48e-01 | 96.3% | 100.0% |
| 5047756 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.61 | 48.0 | 4.50e-01 | 85.2% | 70.0% |
| 4929561 | 223.2.1.62 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DUF6659 | 0.60 | 49.0 | 5.09e-01 | 99.3% | 95.2% |
| 3271101 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.60 | 26.0 | 3.34e-01 | 99.3% | 67.5% |
| 4169658 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.60 | 30.0 | 3.48e-01 | 70.4% | 64.1% |
| 5000881 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.60 | 52.0 | 5.02e-01 | 97.0% | 83.2% |
| 4338460 | 223.2.1.1 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin | 0.60 | 54.0 | 5.45e-01 | 100.0% | 100.0% |
| 3287797 | 881.1.1.26 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF7373 | 0.59 | 53.0 | 4.71e-01 | 98.5% | 86.7% |
| 3560207 | 223.2.1.32 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_2 | 0.59 | 52.0 | 5.22e-01 | 98.5% | 92.9% |
| 5000786 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.58 | 26.0 | 3.34e-01 | 99.3% | 70.0% |
| 4438074 | 223.1.1.5 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › HrcA | 0.57 | 47.0 | 4.66e-01 | 88.9% | 93.1% |
| 3391610 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 51.0 | 4.98e-01 | 99.3% | 90.0% |
| 5030737 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.57 | 31.0 | 3.73e-01 | 79.3% | 78.9% |
| 4931354 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.56 | 47.0 | 4.28e-01 | 91.1% | 80.6% |
| 4994897 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.55 | 46.0 | 4.69e-01 | 99.3% | 91.9% |
| 150440 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.55 | 46.0 | 4.31e-01 | 90.4% | 99.4% |
| 3283279 | 881.1.1.15 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF3558 | 0.54 | 48.0 | 4.88e-01 | 99.3% | 99.2% |
| 3784593 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.54 | 38.0 | 4.09e-01 | 81.5% | 85.2% |
| 1108141 | 881.1.1.12 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › Tsi3 | 0.54 | 45.0 | 4.66e-01 | 99.3% | 95.2% |
| 2771892 | 881.1.1.8 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PknH_C | 0.54 | 48.0 | 4.32e-01 | 99.3% | 93.3% |
| 3961987 | 881.1.1.8 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PknH_C | 0.54 | 48.0 | 4.28e-01 | 99.3% | 95.9% |
| 4954483 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.54 | 45.0 | 4.71e-01 | 98.5% | 100.0% |
| 3291389 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.53 | 47.0 | 4.57e-01 | 99.3% | 96.8% |
| 3951048 | 331.4.1.17 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › ResB | 0.53 | 33.0 | 3.46e-01 | 71.1% | 69.2% |
| 3303563 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.52 | 43.0 | 4.12e-01 | 92.6% | 100.0% |
| 3536489 | 331.9.1.5 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP4E_app_platf | 0.52 | 32.0 | 3.63e-01 | 77.8% | 81.0% |
| 3624850 | 331.9.1.9 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › PF26171 | 0.52 | 32.0 | 3.54e-01 | 79.3% | 78.1% |
| 4974879 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.50 | 42.0 | 4.02e-01 | 93.3% | 100.0% |
| 5079972 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.50 | 41.0 | 4.12e-01 | 88.1% | 93.5% |
D3
medium
residues 196-313_333-357
Domain cluster:
rep: MT764845.1__QNN99764.1__P67b_00005__00005__D50-165_192-210
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00768.26 best | Peptidase_S11 | 68.0 | 1.20e-18 | 88.8% | 46.4% |
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1es2A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.89 | 86.0 | 6.76e-01 | 100.0% | 62.7% |
| 3mfdA01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.84 | 81.0 | 6.63e-01 | 100.0% | 61.0% |
| 2bcfA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.82 | 80.0 | 6.27e-01 | 100.0% | 55.2% |
| 3hunA01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.79 | 75.0 | 5.78e-01 | 100.0% | 56.9% |
| 2j7vB01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.76 | 64.0 | 5.09e-01 | 87.4% | 53.8% |
| 4ewfA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.76 | 64.0 | 5.03e-01 | 87.4% | 54.1% |
| 4hesA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.75 | 63.0 | 4.94e-01 | 87.4% | 52.4% |
| 1ghpA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.74 | 62.0 | 5.01e-01 | 87.4% | 56.0% |
| 1nj4A01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.74 | 71.0 | 5.70e-01 | 100.0% | 57.2% |
| 6izcA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.73 | 62.0 | 4.91e-01 | 87.4% | 55.5% |
| 3p09A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.73 | 62.0 | 4.90e-01 | 87.4% | 55.7% |
| 3qhyA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.72 | 60.0 | 4.85e-01 | 87.4% | 55.8% |
| 2wuqB00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.71 | 60.0 | 4.66e-01 | 87.4% | 56.2% |
| 2xepB02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.71 | 60.0 | 4.77e-01 | 87.4% | 52.7% |
| 3cjmA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.68 | 58.0 | 4.64e-01 | 88.1% | 52.2% |
| 1ci3M02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.66 | 20.0 | 3.11e-01 | 76.9% | 63.8% |
| 1gutA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.62 | 19.0 | 2.84e-01 | 80.4% | 58.2% |
| 1b9mA03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.61 | 21.0 | 2.98e-01 | 81.8% | 62.0% |
| 7w6zA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.61 | 31.0 | 3.75e-01 | 87.4% | 74.5% |
| 1y8tA03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.53 | 31.0 | 3.90e-01 | 99.3% | 95.5% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1574402 | 4019.1.1.2 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S11 | 0.97 | 67.0 | 7.01e-01 | 78.3% | 75.9% |
| 3957658 | 4019.1.1.2 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S11 | 0.93 | 68.0 | 6.92e-01 | 81.8% | 75.7% |
| 3963813 | 4019.1.1.2 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S11 | 0.91 | 68.0 | 7.78e-01 | 80.4% | 99.1% |
| 4866 | 4019.1.1.2 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S11 | 0.87 | 70.0 | 7.63e-01 | 81.8% | 97.5% |
| 3942144 | 4019.1.1.2 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S11 | 0.87 | 64.0 | 7.12e-01 | 82.5% | 93.0% |
| 3508640 | 4019.1.1.2 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S11 | 0.85 | 68.0 | 7.33e-01 | 82.5% | 93.6% |
| 2389898 | 4019.1.1.2 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S11 | 0.82 | 58.0 | 6.61e-01 | 74.8% | 94.5% |
| 1179595 | 4019.1.1.6 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 | 0.80 | 60.0 | 6.64e-01 | 82.5% | 94.1% |
| 3957597 | 4019.1.1.6 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 | 0.75 | 59.0 | 5.71e-01 | 82.5% | 97.5% |
| 3290222 | 223.3.1.8 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 | 0.74 | 62.0 | 4.85e-01 | 87.4% | 61.4% |
| 5004010 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.58 | 29.0 | 3.55e-01 | 88.1% | 73.7% |
| 3583595 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.56 | 24.0 | 3.49e-01 | 77.6% | 91.7% |
| 4992175 | 2498.1.1.9 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M1 | 0.52 | 37.0 | 3.10e-01 | 72.0% | 90.0% |