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SRR1747018_scaffold_2_1202_curated_prodigal-single.1__X__X__00364

Bact-Vir

SRR1747018_scaffold_2_1202_curated_prodigal-single.1__X__X__00364

Identity

Kingdom:
phage

Quality

84.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 21-147
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7x4eA01 1.10.1220.160 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › DNA sulphur modification protein DndE 0.66 50.0 5.42e-01 97.6% 95.3%
2rh3A00 1.10.1220.190 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › VirC2, RHH domain 0.60 51.0 5.26e-01 98.4% 95.9%
1dpgA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.58 44.0 3.37e-01 81.1% 91.9%
1pujA02 1.10.1580.10 Mainly Alpha › Orthogonal Bundle › Conserved Hypothetical Protein Ylqf; Chain: A; domain 2 › 0.54 35.0 4.05e-01 88.2% 89.2%
3nowA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.53 38.0 2.78e-01 75.6% 49.4%
4jykA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.52 37.0 3.57e-01 72.4% 90.2%
2ygwA01 1.20.140.90 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Malonyl-CoA decarboxylase, oligemerization domain 0.52 39.0 3.69e-01 78.7% 86.9%
2w53B00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.51 37.0 3.39e-01 74.8% 75.7%
4mp8A01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.51 37.0 3.46e-01 76.4% 95.0%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4373529 101.1.11.43 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix › TraY 0.72 54.0 5.94e-01 100.0% 99.0%