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SRR1747018_scaffold_2_1202_curated_prodigal-single.1__X__X__00381

Bact-Vir

SRR1747018_scaffold_2_1202_curated_prodigal-single.1__X__X__00381

Identity

Kingdom:
phage

Quality

86.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-65
PDB
CATH (89)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2bj3D02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.80 59.0 5.50e-01 85.9% 63.0%
1sc6A03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.79 54.0 5.01e-01 79.7% 56.1%
2f1fA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.78 58.0 5.35e-01 82.8% 63.3%
1qupA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.78 56.0 5.48e-01 84.4% 70.0%
2q2eB01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.77 69.0 4.70e-01 100.0% 58.8%
4dplA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.77 68.0 4.90e-01 100.0% 90.1%
2g17A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.76 68.0 5.05e-01 100.0% 85.0%
3ibwA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.76 55.0 5.15e-01 82.8% 62.0%
4pcqA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.75 53.0 4.82e-01 82.8% 56.0%
3i4pA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.75 54.0 4.89e-01 82.8% 57.1%
2dt9A01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.74 60.0 5.78e-01 100.0% 77.0%
5xogK00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.74 65.0 5.37e-01 100.0% 54.9%
6gmhK00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.74 65.0 5.32e-01 100.0% 53.9%
1vhzA01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.74 43.0 3.06e-01 100.0% 20.8%
3tupA02 3.30.70.380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain 0.74 57.0 4.94e-01 82.8% 62.5%
2mobA00 3.90.56.10 Alpha Beta › Alpha-Beta Complex › Phenol Hydroxylase P2 Protein › Monooxygenase component MmoB/DmpM 0.74 52.0 4.60e-01 84.4% 51.1%
4fppA02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.74 65.0 5.11e-01 100.0% 64.2%
4acvA00 3.30.2000.30 Alpha Beta › 2-Layer Sandwich › STM4215-like › 0.73 64.0 5.25e-01 100.0% 67.2%
2cg4A02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.73 51.0 4.71e-01 82.8% 57.1%
2psoB02 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.72 65.0 4.68e-01 100.0% 78.1%
1u8sA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.72 55.0 5.02e-01 82.8% 62.8%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.72 63.0 5.61e-01 98.4% 98.9%
4aybL00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.72 60.0 5.39e-01 100.0% 65.9%
2nyiA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.72 53.0 4.91e-01 85.9% 61.7%
1zpvA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.72 54.0 5.00e-01 84.4% 62.4%
2go8A01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.71 52.0 4.97e-01 82.8% 67.6%
2gqqA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.70 50.0 4.56e-01 82.8% 56.5%
3onqA02 3.30.70.2730 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 52.0 4.84e-01 85.9% 63.0%
6ruiK00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.70 63.0 5.35e-01 100.0% 62.1%
2jvfA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.70 61.0 5.39e-01 98.4% 96.8%
4wxaA00 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.70 54.0 4.90e-01 82.8% 69.0%
2mdaA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.70 59.0 5.20e-01 95.3% 71.6%
2gjhA00 3.30.1070.20 Alpha Beta › 2-Layer Sandwich › Cell Cycle; Chain A › 0.69 50.0 5.24e-01 78.1% 87.7%
2q7eA02 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.69 60.0 4.21e-01 100.0% 77.4%
2dbbA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.69 50.0 4.45e-01 84.4% 53.8%
2efpA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.69 51.0 4.43e-01 87.5% 52.0%
4ctaA02 3.30.70.2860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 50.0 4.77e-01 82.8% 66.7%
3encA00 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.68 52.0 4.89e-01 82.8% 69.6%
3zxoA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.68 59.0 4.80e-01 100.0% 57.6%
2j0wA03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.67 55.0 5.20e-01 98.4% 74.1%
4lowA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.67 57.0 5.29e-01 100.0% 73.8%
4feuF01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.67 57.0 5.50e-01 95.3% 84.9%
5yjlB01 3.30.460.30 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Glutamyl-tRNA reductase, N-terminal domain 0.66 49.0 3.70e-01 79.7% 37.3%
3c1mA02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.66 56.0 4.25e-01 100.0% 85.4%
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.66 45.0 5.15e-01 100.0% 95.8%
2x8kA01 2.40.30.200 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.66 55.0 4.83e-01 100.0% 76.2%
3wirA01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.65 57.0 3.84e-01 100.0% 51.0%
1zvpD00 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.65 57.0 4.55e-01 100.0% 79.4%
6cqeA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.65 55.0 5.01e-01 95.3% 75.6%
5jzjA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.65 57.0 5.01e-01 98.4% 71.3%
2gysA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 57.0 5.19e-01 100.0% 77.9%
6ygnA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.64 54.0 4.61e-01 95.3% 59.3%
1x19A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.64 56.0 4.18e-01 98.4% 86.3%
3c8dA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 55.0 4.43e-01 98.4% 48.5%
2b4vA03 3.30.70.1970 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 50.0 4.30e-01 85.9% 57.6%
5w2fA01 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.63 52.0 4.81e-01 96.9% 70.9%
6lbsB01 3.30.1370.230 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain 0.62 55.0 5.16e-01 98.4% 88.6%
1b24A01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.62 53.0 4.74e-01 100.0% 74.7%
4h5bA00 3.30.1460.70 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.62 52.0 4.08e-01 98.4% 42.8%
2q7nA05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 54.0 4.69e-01 100.0% 64.3%
6v3pD01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 54.0 4.72e-01 100.0% 68.7%
4i3gA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 52.0 4.40e-01 100.0% 64.0%
4d9uA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 52.0 4.76e-01 98.4% 71.6%
3lpxB02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.60 52.0 4.63e-01 100.0% 68.1%
3wa5B00 2.60.120.1690 Mainly Beta › Sandwich › Jelly Rolls › 0.60 53.0 4.29e-01 98.4% 62.1%
3on9A00 2.60.240.20 Mainly Beta › Sandwich › Viral Chemokine Inhibitor; Chain A › 0.60 46.0 3.52e-01 85.9% 51.9%
4gioA00 2.60.40.3230 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 52.0 4.60e-01 100.0% 76.0%
6cz4A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 52.0 4.75e-01 100.0% 77.9%
2nwuB01 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.60 43.0 3.50e-01 87.5% 39.7%
3gzrB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 48.0 3.65e-01 85.9% 45.4%
4gf3A00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.59 48.0 3.99e-01 96.9% 49.6%
4za1C00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 44.0 3.98e-01 85.9% 57.6%
6vp6A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 48.0 4.50e-01 98.4% 73.5%
3fzgA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 49.0 3.55e-01 96.9% 86.2%
2clqA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 50.0 4.62e-01 100.0% 75.3%
2opkB01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 51.0 4.48e-01 100.0% 96.8%
2cg9X01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 50.0 4.35e-01 100.0% 75.0%
2g1dA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.57 47.0 4.23e-01 100.0% 74.5%
3e99A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 45.0 3.40e-01 85.9% 41.2%
3o0lA00 2.60.40.3230 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 48.0 4.14e-01 100.0% 64.2%
2c47A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 46.0 4.49e-01 96.9% 87.7%
3rnsA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 50.0 4.28e-01 100.0% 86.0%
1uunA01 2.60.40.1650 Mainly Beta › Sandwich › Immunoglobulin-like › Porin MspA (Ig-like beta-sandwich domain) 0.55 47.0 3.83e-01 100.0% 61.4%
2qrrA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.55 43.0 3.83e-01 89.1% 63.9%
2plgA01 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.54 43.0 3.60e-01 96.9% 58.3%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.53 44.0 4.24e-01 100.0% 80.0%
2f86B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 40.0 3.21e-01 82.8% 45.7%
4ipeB02 3.30.230.80 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.51 42.0 3.28e-01 100.0% 38.2%
3akjA01 3.30.200.120 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.51 40.0 3.86e-01 98.4% 78.4%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2445347 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.85 61.0 5.97e-01 81.2% 69.6%
3822570 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.82 60.0 5.50e-01 82.8% 61.3%
3330442 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.82 59.0 5.36e-01 82.8% 57.6%
3299923 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.80 58.0 5.39e-01 82.8% 61.3%
5011632 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.80 70.0 5.57e-01 100.0% 49.6%
3602267 881.3.1.0 a+b three layers › Mog1p/PsbP-like › Outer membrane-associated lipoprotein TP0453 › Outer membrane-associated lipoprotein TP0453 0.80 72.0 4.82e-01 100.0% 28.0%
3445077 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.79 71.0 6.47e-01 100.0% 75.9%
3955607 304.4.1.4 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM 0.79 60.0 5.12e-01 81.2% 55.0%
5051872 873.1.1.12 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › PF27313 0.79 68.0 5.43e-01 95.3% 50.0%
3719440 305.1.1.2 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L_2 0.78 71.0 5.60e-01 100.0% 51.2%
4955435 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.78 54.0 5.17e-01 81.2% 62.7%
3660837 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.78 68.0 6.15e-01 98.4% 71.8%
3289052 304.156.1.5 a+b two layers › Alpha-beta plaits › DNA translocase FtsK N-terminal domain › DNA translocase FtsK N-terminal domain › PF31086 0.77 65.0 5.76e-01 98.4% 65.6%
3970035 225.1.1.0 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.77 69.0 5.51e-01 100.0% 57.6%
3315331 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.77 65.0 6.01e-01 96.9% 73.8%
3964731 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.77 66.0 5.65e-01 93.8% 63.0%
3964190 310.3.1.3 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › PilN 0.77 69.0 5.02e-01 100.0% 38.2%
3317802 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.76 68.0 5.94e-01 100.0% 66.3%
4999334 304.165.1.4 a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 › HVO_2525_N 0.76 64.0 5.15e-01 100.0% 48.0%
4989069 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.76 68.0 5.14e-01 100.0% 50.0%
3596774 225.1.1.0 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.76 65.0 5.27e-01 100.0% 50.8%
4955075 310.3.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.76 68.0 6.52e-01 98.4% 86.3%
3163581 304.28.1.1 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › ACR_tran 0.76 59.0 5.19e-01 84.4% 60.0%
3654284 305.1.1.2 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L_2 0.76 66.0 6.47e-01 100.0% 88.6%
4940119 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.75 66.0 4.98e-01 98.4% 64.5%
3312923 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.75 66.0 5.76e-01 100.0% 65.3%
3660389 304.109.1.0 a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e 0.75 67.0 6.68e-01 98.4% 96.9%
3592576 305.1.1.0 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase 0.75 67.0 5.38e-01 100.0% 51.2%
4403875 304.28.1.1 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › ACR_tran 0.75 61.0 5.28e-01 87.5% 58.9%
4929771 304.151.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase 0.75 56.0 5.16e-01 82.8% 61.9%
3667551 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.75 64.0 5.68e-01 100.0% 66.7%
3823591 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.74 67.0 5.76e-01 100.0% 67.0%
3641084 387.1.5.31 few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › PF29352 0.74 54.0 5.83e-01 78.1% 100.0%
3364258 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.74 64.0 5.77e-01 100.0% 69.3%
4940919 304.102.1.2 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruD 0.74 66.0 4.63e-01 100.0% 84.9%
3810458 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.74 64.0 5.60e-01 100.0% 64.2%
3838269 304.28.1.1 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › ACR_tran 0.74 60.0 5.28e-01 89.1% 61.1%
3384789 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.74 66.0 5.44e-01 100.0% 57.3%
3998667 4014.1.1.1 a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › DNA_topoisoIV 0.73 66.0 4.63e-01 100.0% 32.8%
3357746 304.12.1.8 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › bHLH-TF_ACT-like_plant 0.73 54.0 5.26e-01 78.1% 72.9%
3667432 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.73 64.0 5.63e-01 98.4% 68.4%
3666577 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.73 63.0 5.41e-01 100.0% 61.6%
4237289 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.73 64.0 4.26e-01 100.0% 53.1%
4940284 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.72 53.0 5.06e-01 78.1% 72.0%
3666529 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.72 56.0 5.11e-01 84.4% 64.7%
5035279 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.72 57.0 5.13e-01 84.4% 63.5%
4102600 304.4.1.8 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › rhaM 0.72 55.0 4.52e-01 82.8% 54.8%
4517545 305.1.1.2 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L_2 0.72 60.0 5.30e-01 100.0% 63.2%
3987875 306.2.2.0 a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › Hypothetical protein SAV1430 0.71 55.0 5.08e-01 100.0% 64.7%
3603483 3513.1.1.0 a+b two layers › Putative lipoprotein LppA › Putative lipoprotein LppA › Putative lipoprotein LppA 0.71 62.0 5.02e-01 98.4% 72.8%
4529236 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.71 62.0 4.12e-01 100.0% 51.1%
3973731 304.8.1.98 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › GDH_ACT3 0.71 64.0 4.81e-01 100.0% 45.3%
4245606 304.8.1.98 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › GDH_ACT3 0.71 64.0 4.78e-01 100.0% 43.2%
3382396 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.71 62.0 5.61e-01 100.0% 72.9%
3438815 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.71 60.0 5.49e-01 100.0% 71.8%
3824912 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.70 59.0 5.51e-01 98.4% 75.0%
3306024 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.70 60.0 5.03e-01 100.0% 55.5%
4961378 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.70 52.0 4.68e-01 87.5% 56.7%
5029121 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.70 51.0 4.42e-01 84.4% 50.0%
5033229 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.70 51.0 4.56e-01 84.4% 55.6%
3987968 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.70 61.0 4.89e-01 100.0% 53.8%
3305653 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.70 59.0 5.77e-01 98.4% 87.1%
3451456 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.70 58.0 5.14e-01 100.0% 63.2%
3426902 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.69 60.0 5.32e-01 100.0% 66.3%
None 0.69 62.0 4.83e-01 100.0% 48.9%
4028770 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.69 54.0 4.80e-01 89.1% 60.0%
3829402 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.69 61.0 5.66e-01 100.0% 78.8%
3600697 225.1.1.0 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.69 60.0 4.93e-01 100.0% 59.2%
3661475 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.69 59.0 4.47e-01 100.0% 39.3%
3444368 304.156.1.4 a+b two layers › Alpha-beta plaits › DNA translocase FtsK N-terminal domain › DNA translocase FtsK N-terminal domain › DUF2854 0.69 59.0 4.79e-01 100.0% 50.0%
5029881 310.3.1.26 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › HVO_2525_N 0.68 59.0 4.64e-01 100.0% 46.9%
3822278 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.68 59.0 5.33e-01 95.3% 70.6%
3164985 310.3.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.68 55.0 4.16e-01 100.0% 36.3%
3826658 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.68 59.0 5.39e-01 100.0% 72.9%
4217713 327.21.1.2 a+b two layers › Alpha-lytic protease prodomain-like › SpoIIE regulatory domain › SpoIIE regulatory domain › PF31108 0.68 60.0 5.50e-01 100.0% 78.8%
3813809 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.68 55.0 4.85e-01 100.0% 60.0%
5030107 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.67 49.0 4.40e-01 84.4% 55.6%
3643150 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.67 57.0 5.23e-01 98.4% 70.6%
5028999 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.67 50.0 4.32e-01 84.4% 51.0%
5046762 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.67 49.0 4.44e-01 82.8% 56.7%
4956868 304.102.1.0 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase 0.67 57.0 3.93e-01 95.3% 42.2%
3489258 306.8.1.0 a+b two layers › Glucose permease domain IIB-like › TM1457-like › TM1457-like 0.66 58.0 4.94e-01 100.0% 60.0%
3981185 241.1.1.25 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › PF27378 0.65 56.0 4.69e-01 100.0% 54.8%
4031724 225.1.1.0 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.65 55.0 4.60e-01 100.0% 60.8%
4958905 241.5.1.2 a+b two layers › Type III secretory system chaperone-like › DNA-binding C-terminal domain of the transcription factor MotA › DNA-binding C-terminal domain of the transcription factor MotA › DUF1529 0.65 57.0 4.66e-01 100.0% 57.1%
5028931 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.64 47.0 4.32e-01 84.4% 60.0%
3608130 225.1.1.0 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.64 54.0 4.39e-01 100.0% 48.9%
1211839 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.61 51.0 4.60e-01 100.0% 72.9%
4658998 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.60 53.0 3.88e-01 100.0% 64.4%
3637257 206.1.1.11 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.60 52.0 3.36e-01 96.9% 20.3%
3526610 223.2.1.4 a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.56 47.0 3.43e-01 100.0% 55.6%
4943858 241.1.1.0 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.55 44.0 3.65e-01 100.0% 46.9%
3182154 223.2.1.6 a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN 0.54 44.0 3.01e-01 87.5% 69.1%
4991405 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.53 44.0 2.71e-01 100.0% 14.8%
5058917 241.1.1.0 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.53 42.0 3.54e-01 98.4% 48.8%
3536044 223.2.1.4 a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.52 43.0 3.07e-01 100.0% 47.1%
3738992 220.1.1.9 beta barrels › PH domain-like › PH domain-like › PH domain-like › Voldacs 0.52 47.0 3.45e-01 100.0% 39.4%
3339317 3887.2.1.1 a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 › Stress-antifung 0.51 46.0 3.82e-01 100.0% 58.2%
3808822 3887.2.1.1 a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 › Stress-antifung 0.50 45.0 3.70e-01 100.0% 55.7%