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SRR1747018_scaffold_2_1202_curated_prodigal-single.1__X__X__00488
Bact-VirSRR1747018_scaffold_2_1202_curated_prodigal-single.1__X__X__00488
Identity
- Kingdom:
- phage
Quality
88.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-148
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02981.22 best | FokI_D1 | 93.2 | 2.90e-26 | 90.9% | 90.6% |
CATH (84)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fokB01 | 3.90.241.10 | Alpha Beta › Alpha-Beta Complex › FokI Restriction Endonuclease; Chain A, domain 1 › Foki Restriction Endonuclease, Chain A, domain 1 | 0.94 | 90.0 | 6.73e-01 | 100.0% | 46.3% |
| 4yifF00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 44.0 | 4.53e-01 | 93.9% | 53.8% |
| 2qwwC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 45.0 | 4.42e-01 | 94.7% | 52.2% |
| 1lnwF01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 43.0 | 4.50e-01 | 93.9% | 55.6% |
| 2a61B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 44.0 | 4.42e-01 | 93.9% | 52.6% |
| 4kmfA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 37.0 | 5.36e-01 | 84.1% | 95.2% |
| 4o5vA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 42.0 | 5.65e-01 | 89.4% | 95.8% |
| 3cdhA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 43.0 | 4.34e-01 | 93.9% | 52.2% |
| 3b73B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 46.0 | 5.50e-01 | 100.0% | 84.3% |
| 3o2pE00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 41.0 | 5.08e-01 | 84.8% | 77.9% |
| 1bjaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 43.0 | 5.02e-01 | 93.9% | 73.7% |
| 2fxaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 43.0 | 4.05e-01 | 93.9% | 44.9% |
| 4mtdD01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 40.0 | 4.86e-01 | 84.8% | 73.9% |
| 5trdA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 47.0 | 5.81e-01 | 93.2% | 92.9% |
| 1p6rA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 45.0 | 5.60e-01 | 100.0% | 91.5% |
| 4b8xA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 45.0 | 4.45e-01 | 94.7% | 53.6% |
| 1c0wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 42.0 | 5.57e-01 | 90.9% | 95.9% |
| 2wteA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 42.0 | 5.58e-01 | 92.4% | 97.2% |
| 1on2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 43.0 | 5.62e-01 | 90.9% | 98.6% |
| 1sd4A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 39.0 | 5.48e-01 | 84.1% | 100.0% |
| 3r4kB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 38.0 | 5.25e-01 | 85.6% | 96.8% |
| 3ecoB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 44.0 | 4.53e-01 | 96.2% | 57.4% |
| 3oopA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 43.0 | 4.31e-01 | 93.9% | 53.7% |
| 5y6iA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 41.0 | 5.42e-01 | 90.9% | 94.5% |
| 5zyrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 41.0 | 3.96e-01 | 93.9% | 45.7% |
| 2j5oA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 36.0 | 4.99e-01 | 84.1% | 90.8% |
| 5tjjA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 40.0 | 5.25e-01 | 90.2% | 91.8% |
| 1tbxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 44.0 | 5.25e-01 | 91.7% | 83.3% |
| 4hw0C00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 44.0 | 5.17e-01 | 93.9% | 80.6% |
| 2xrnB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 37.0 | 5.07e-01 | 84.8% | 93.8% |
| 4a6dA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 41.0 | 4.85e-01 | 89.4% | 74.5% |
| 2l4mA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 36.0 | 4.88e-01 | 84.8% | 87.0% |
| 2o0yB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 37.0 | 5.08e-01 | 85.6% | 93.8% |
| 1zarA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 44.0 | 5.24e-01 | 93.9% | 85.4% |
| 1stzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 45.0 | 5.47e-01 | 93.9% | 91.8% |
| 3m8eA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 45.0 | 5.18e-01 | 93.9% | 79.2% |
| 2r3sB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 36.0 | 4.55e-01 | 87.1% | 75.3% |
| 3dv8A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 43.0 | 5.46e-01 | 92.4% | 96.2% |
| 2co5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 45.0 | 5.33e-01 | 93.9% | 87.0% |
| 3mq0A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 39.0 | 4.92e-01 | 95.5% | 85.7% |
| 1mkmB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 39.0 | 5.05e-01 | 95.5% | 89.5% |
| 4jqfA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 41.0 | 5.34e-01 | 84.1% | 97.3% |
| 3cuoD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 40.0 | 4.73e-01 | 91.7% | 75.5% |
| 2fnaA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 39.0 | 5.07e-01 | 90.2% | 94.5% |
| 3gwzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 38.0 | 4.54e-01 | 89.4% | 75.3% |
| 2qvoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 42.0 | 5.08e-01 | 93.9% | 88.5% |
| 2zj2A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 43.0 | 5.28e-01 | 91.7% | 94.0% |
| 2do7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 39.0 | 4.93e-01 | 90.2% | 88.7% |
| 3cuqC01 | 1.10.10.570 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › """Winged helix"" DNA-binding domain. Chain C. Domain 1" | 0.71 | 39.0 | 4.50e-01 | 87.1% | 72.4% |
| 4ev0A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 42.0 | 5.23e-01 | 98.5% | 100.0% |
| 5hvqC02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 43.0 | 4.88e-01 | 90.9% | 81.6% |
| 4d7kA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 42.0 | 4.85e-01 | 99.2% | 82.3% |
| 3bwgB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 36.0 | 4.78e-01 | 87.1% | 95.7% |
| 3b02A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 42.0 | 5.06e-01 | 91.7% | 94.1% |
| 2ek5B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 42.0 | 4.58e-01 | 94.7% | 73.4% |
| 4i2oA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 41.0 | 5.05e-01 | 92.4% | 97.5% |
| 3c7jA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 34.0 | 4.07e-01 | 84.1% | 69.2% |
| 1xmkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 38.0 | 4.81e-01 | 90.9% | 92.4% |
| 7pzaA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 41.0 | 4.96e-01 | 89.4% | 93.0% |
| 4q48A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 47.0 | 4.26e-01 | 100.0% | 54.7% |
| 2hs5A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 34.0 | 4.46e-01 | 84.8% | 94.0% |
| 1w5sA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 45.0 | 5.00e-01 | 93.2% | 88.3% |
| 7xc2A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 44.0 | 4.84e-01 | 90.9% | 84.0% |
| 2bgcA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 41.0 | 4.66e-01 | 91.7% | 83.2% |
| 4tv7D01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 36.0 | 4.41e-01 | 94.7% | 84.7% |
| 1fnnB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 43.0 | 4.84e-01 | 93.2% | 87.4% |
| 3jamK00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 39.0 | 4.46e-01 | 92.4% | 81.2% |
| 3jtgA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 41.0 | 4.95e-01 | 84.8% | 100.0% |
| 3d0sA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 40.0 | 4.86e-01 | 91.7% | 100.0% |
| 2ijlB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 37.0 | 4.08e-01 | 95.5% | 68.8% |
| 4etsA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 37.0 | 4.44e-01 | 84.8% | 87.4% |
| 2fmyA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 39.0 | 4.82e-01 | 90.9% | 100.0% |
| 3j7aY00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 42.0 | 3.98e-01 | 95.5% | 57.1% |
| 2h6bA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 39.0 | 4.50e-01 | 92.4% | 86.5% |
| 1k78B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 42.0 | 4.60e-01 | 90.2% | 87.3% |
| 5xyiK00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 37.0 | 4.32e-01 | 93.2% | 86.7% |
| 5w3gA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 44.0 | 4.76e-01 | 99.2% | 90.0% |
| 6qv3A05 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 40.0 | 4.70e-01 | 88.6% | 97.8% |
| 2isyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 45.0 | 4.49e-01 | 95.5% | 76.8% |
| 2cw7A02 | 1.10.10.1010 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Intein homing endonuclease, domain IV | 0.57 | 38.0 | 3.70e-01 | 100.0% | 61.0% |
| 3bjoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 34.0 | 3.81e-01 | 91.7% | 75.7% |
| 2v7fA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 41.0 | 4.11e-01 | 93.9% | 76.3% |
| 4cgyA02 | 1.10.460.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 | 0.53 | 49.0 | 4.27e-01 | 98.5% | 70.5% |
| 4gcvC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 43.0 | 4.27e-01 | 97.7% | 82.3% |
ECOD (98)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2634 | 101.1.2.42 ↗ | alpha arrays › HTH › HTH › winged helix domain › FokI_D1 | 0.96 | 85.0 | 8.57e-01 | 92.4% | 90.9% |
| 4525547 | 101.1.2.42 ↗ | alpha arrays › HTH › HTH › winged helix domain › FokI_D1 | 0.93 | 82.0 | 8.01e-01 | 90.9% | 85.7% |
| 3235950 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 46.0 | 5.53e-01 | 92.4% | 83.3% |
| 4374756 | 101.1.2.92 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_11 | 0.80 | 46.0 | 5.59e-01 | 92.4% | 87.1% |
| 4928999 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 43.0 | 5.19e-01 | 93.9% | 77.8% |
| 4025713 | 101.1.2.127 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 | 0.80 | 41.0 | 5.40e-01 | 84.8% | 89.2% |
| 3970023 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 39.0 | 4.96e-01 | 87.9% | 78.8% |
| 4999827 | 101.1.2.927 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7347 | 0.79 | 43.0 | 4.99e-01 | 93.9% | 72.4% |
| 4975439 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 42.0 | 5.19e-01 | 91.7% | 81.2% |
| 326087 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.79 | 44.0 | 4.31e-01 | 94.7% | 51.0% |
| 4928371 | 101.1.2.927 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7347 | 0.79 | 46.0 | 5.49e-01 | 93.9% | 84.4% |
| 3288595 | 101.1.2.110 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_IclR | 0.79 | 41.0 | 5.49e-01 | 90.2% | 95.7% |
| 4931665 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 43.0 | 5.56e-01 | 90.9% | 94.7% |
| 4468068 | 101.1.2.46 ↗ | alpha arrays › HTH › HTH › winged helix domain › HrcA_DNA-bdg | 0.78 | 45.0 | 5.15e-01 | 92.4% | 76.0% |
| 4672682 | 101.1.2.27 ↗ | alpha arrays › HTH › HTH › winged helix domain › LexA_DNA_bind | 0.78 | 45.0 | 5.13e-01 | 92.4% | 76.0% |
| 5037574 | 101.1.2.927 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7347 | 0.77 | 44.0 | 5.08e-01 | 93.9% | 77.9% |
| 5009381 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 38.0 | 5.01e-01 | 87.1% | 88.6% |
| 5019593 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 44.0 | 5.39e-01 | 91.7% | 88.2% |
| 5015083 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 44.0 | 5.47e-01 | 92.4% | 93.8% |
| 5031515 | 101.1.2.927 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7347 | 0.76 | 44.0 | 5.15e-01 | 93.9% | 80.0% |
| 4679870 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 44.0 | 5.15e-01 | 92.4% | 80.0% |
| 3973067 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 40.0 | 5.36e-01 | 95.5% | 97.1% |
| 3652603 | 101.1.2.516 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF25895 | 0.76 | 43.0 | 4.73e-01 | 92.4% | 67.3% |
| 4984732 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 46.0 | 5.60e-01 | 93.2% | 92.0% |
| 5001004 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.76 | 43.0 | 4.51e-01 | 96.2% | 61.7% |
| 4976781 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 35.0 | 5.07e-01 | 84.1% | 98.3% |
| 3966501 | 101.1.2.110 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_IclR | 0.75 | 40.0 | 4.93e-01 | 91.7% | 81.2% |
| 3259230 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.74 | 40.0 | 4.51e-01 | 90.9% | 68.0% |
| 4420420 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 43.0 | 5.10e-01 | 91.7% | 83.3% |
| 3741636 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 40.0 | 4.75e-01 | 87.9% | 75.3% |
| 4964961 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 44.0 | 5.13e-01 | 93.2% | 82.1% |
| 4004641 | 101.1.2.110 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_IclR | 0.74 | 40.0 | 5.28e-01 | 95.5% | 98.6% |
| 3441899 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.74 | 44.0 | 5.60e-01 | 90.2% | 98.8% |
| 4596757 | 101.1.2.89 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR | 0.74 | 46.0 | 5.20e-01 | 93.2% | 82.0% |
| 3268630 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 44.0 | 5.10e-01 | 90.9% | 82.1% |
| 142978 | 101.1.2.110 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_IclR | 0.73 | 38.0 | 5.05e-01 | 90.2% | 95.7% |
| 4241356 | 101.1.2.280 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_12 | 0.73 | 45.0 | 5.23e-01 | 93.9% | 86.3% |
| 5061613 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 43.0 | 5.22e-01 | 90.2% | 90.6% |
| 5048345 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 41.0 | 4.66e-01 | 90.9% | 73.5% |
| 5009770 | 101.1.2.181 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM_C | 0.72 | 41.0 | 5.09e-01 | 90.9% | 91.3% |
| 3442602 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.72 | 46.0 | 5.29e-01 | 91.7% | 86.0% |
| 5077744 | 101.1.2.927 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7347 | 0.72 | 45.0 | 4.82e-01 | 95.5% | 72.2% |
| 3206236 | 101.1.2.520 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7779 | 0.72 | 44.0 | 5.01e-01 | 92.4% | 83.2% |
| 4061227 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.72 | 42.0 | 3.97e-01 | 96.2% | 48.1% |
| 3584275 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 44.0 | 4.96e-01 | 90.9% | 81.0% |
| 3832037 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.71 | 45.0 | 3.45e-01 | 91.7% | 29.6% |
| 4012714 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 41.0 | 3.94e-01 | 93.2% | 50.0% |
| 5053725 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 37.0 | 4.39e-01 | 90.9% | 73.3% |
| 3710117 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 39.0 | 4.64e-01 | 91.7% | 78.9% |
| 3620820 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 43.0 | 4.21e-01 | 91.7% | 55.2% |
| 5011299 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 46.0 | 4.98e-01 | 92.4% | 76.5% |
| 4294304 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.70 | 43.0 | 4.35e-01 | 99.2% | 60.0% |
| 4012389 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 40.0 | 3.94e-01 | 95.5% | 52.1% |
| 3242401 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 43.0 | 4.97e-01 | 91.7% | 84.2% |
| 5079289 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 41.0 | 4.55e-01 | 95.5% | 72.4% |
| 4146435 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.70 | 40.0 | 3.64e-01 | 96.2% | 42.9% |
| 3964016 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 39.0 | 3.72e-01 | 88.6% | 45.6% |
| 3816427 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.70 | 44.0 | 4.91e-01 | 93.9% | 80.0% |
| 3450793 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.70 | 45.0 | 4.44e-01 | 93.9% | 61.4% |
| 4986171 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.70 | 47.0 | 5.62e-01 | 90.9% | 100.0% |
| 3428027 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.69 | 45.0 | 4.49e-01 | 93.9% | 63.7% |
| 3315363 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.69 | 46.0 | 4.34e-01 | 92.4% | 56.2% |
| 4927474 | 101.1.2.200 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_65 | 0.69 | 41.0 | 4.53e-01 | 99.2% | 73.3% |
| 5040941 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 49.0 | 5.62e-01 | 93.9% | 97.0% |
| 3269517 | 101.1.2.183 ↗ | alpha arrays › HTH › HTH › winged helix domain › MUS81-like_WH | 0.69 | 47.0 | 5.17e-01 | 92.4% | 86.7% |
| 3693546 | 101.1.2.178 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_61 | 0.69 | 46.0 | 5.11e-01 | 100.0% | 85.7% |
| 5056734 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 42.0 | 4.52e-01 | 100.0% | 70.4% |
| 1844230 | 101.1.2.200 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_65 | 0.68 | 42.0 | 4.69e-01 | 99.2% | 78.6% |
| 4998317 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.67 | 39.0 | 3.20e-01 | 93.9% | 31.9% |
| 4850833 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 38.0 | 4.52e-01 | 95.5% | 81.3% |
| 4012859 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 43.0 | 4.75e-01 | 92.4% | 81.0% |
| 4972696 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 34.0 | 4.54e-01 | 90.2% | 98.4% |
| 5057164 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 42.0 | 4.71e-01 | 100.0% | 83.0% |
| 5072780 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.65 | 45.0 | 5.15e-01 | 97.7% | 93.0% |
| 3237702 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 37.0 | 4.55e-01 | 97.7% | 87.1% |
| 4928633 | 101.1.2.18 ↗ | alpha arrays › HTH › HTH › winged helix domain › Ribosomal_S19e | 0.65 | 42.0 | 4.65e-01 | 93.9% | 81.0% |
| 4319999 | 101.1.2.111 ↗ | alpha arrays › HTH › HTH › winged helix domain › RQC | 0.65 | 46.0 | 5.29e-01 | 92.4% | 100.0% |
| 3282556 | 101.1.2.643 ↗ | alpha arrays › HTH › HTH › winged helix domain › AAA_assoc_C | 0.64 | 38.0 | 4.66e-01 | 90.2% | 96.2% |
| 4933236 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 39.0 | 4.27e-01 | 91.7% | 73.6% |
| 5073003 | 2004.1.1.16 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf | 0.62 | 37.0 | 3.10e-01 | 97.0% | 32.3% |
| 3478717 | 101.1.2.392 ↗ | alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH | 0.62 | 47.0 | 4.99e-01 | 100.0% | 90.4% |
| 3652381 | 101.1.2.392 ↗ | alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH | 0.62 | 47.0 | 5.01e-01 | 100.0% | 90.4% |
| 4039619 | 101.1.2.2 ↗ | alpha arrays › HTH › HTH › winged helix domain › Ets | 0.61 | 42.0 | 4.51e-01 | 90.2% | 80.9% |
| 5042403 | 101.1.2.913 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_Lhr | 0.61 | 47.0 | 4.68e-01 | 100.0% | 78.5% |
| 4113229 | 101.1.2.2 ↗ | alpha arrays › HTH › HTH › winged helix domain › Ets | 0.61 | 43.0 | 4.51e-01 | 92.4% | 80.8% |
| 3713637 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 45.0 | 4.77e-01 | 100.0% | 87.0% |
| None | — | 0.60 | 44.0 | 4.90e-01 | 99.2% | 95.2% | |
| 4864568 | 101.1.2.392 ↗ | alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH | 0.60 | 43.0 | 4.77e-01 | 91.7% | 92.5% |
| 3729923 | 101.1.2.86 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_Nse1 | 0.60 | 46.0 | 4.31e-01 | 91.7% | 66.3% |
| None | — | 0.59 | 45.0 | 4.74e-01 | 100.0% | 88.3% | |
| 3996321 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 45.0 | 4.39e-01 | 100.0% | 73.8% |
| 3208874 | 101.1.2.392 ↗ | alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH | 0.57 | 45.0 | 4.75e-01 | 100.0% | 92.5% |
| 3730487 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 41.0 | 4.01e-01 | 92.4% | 71.0% |
| 3838276 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.54 | 50.0 | 4.33e-01 | 97.0% | 75.8% |
| 4927940 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.52 | 45.0 | 3.43e-01 | 96.2% | 60.1% |
| 4013939 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 40.0 | 3.73e-01 | 93.9% | 65.5% |
| 3733518 | 101.1.2.392 ↗ | alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH | 0.51 | 45.0 | 4.54e-01 | 100.0% | 94.1% |
| 3631239 | 101.1.2.68 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 | 0.50 | 46.0 | 4.11e-01 | 100.0% | 72.4% |
D2
high
residues 153-275
Domain cluster:
rep: GU949551.1__ADK37897.1__phiCD6356_35__00035__D135-230
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02980.23 best | FokI_dom_2 | 29.1 | 1.50e-06 | 95.9% | 59.3% |
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fokB01 | 3.90.241.10 | Alpha Beta › Alpha-Beta Complex › FokI Restriction Endonuclease; Chain A, domain 1 › Foki Restriction Endonuclease, Chain A, domain 1 | 0.88 | 83.0 | 6.13e-01 | 100.0% | 43.4% |
| 3l7wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 56.0 | 6.09e-01 | 100.0% | 76.2% |
| 2g9wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 44.0 | 6.09e-01 | 91.1% | 94.0% |
| 2mlgA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 46.0 | 5.81e-01 | 91.1% | 84.4% |
| 5dymA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 54.0 | 6.11e-01 | 99.2% | 84.4% |
| 4ejoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 52.0 | 5.51e-01 | 100.0% | 70.5% |
| 1sfxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 48.0 | 5.26e-01 | 98.4% | 70.2% |
| 3elkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 53.0 | 5.79e-01 | 100.0% | 79.0% |
| 2mh2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 42.0 | 5.83e-01 | 90.2% | 100.0% |
| 1sd4A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 42.0 | 5.76e-01 | 91.1% | 100.0% |
| 4hqeA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 51.0 | 5.53e-01 | 100.0% | 76.2% |
| 3u1dB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 53.0 | 5.02e-01 | 100.0% | 58.7% |
| 2dqlA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 53.0 | 5.54e-01 | 100.0% | 73.9% |
| 4kt5C00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 45.0 | 5.27e-01 | 99.2% | 85.2% |
| 5xnsC00 | 1.10.10.580 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E | 0.74 | 42.0 | 5.53e-01 | 91.1% | 100.0% |
| 3c18A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 35.0 | 5.10e-01 | 81.3% | 100.0% |
| 1bm9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 47.0 | 4.83e-01 | 100.0% | 74.2% |
| 5dcaA11 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 50.0 | 5.40e-01 | 99.2% | 93.3% |
| 1xb4B01 | 1.10.10.570 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › """Winged helix"" DNA-binding domain. Chain C. Domain 1" | 0.65 | 42.0 | 4.50e-01 | 94.3% | 76.9% |
| 1vm0A00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.64 | 41.0 | 4.61e-01 | 98.4% | 84.9% |
| 2ch0A01 | 1.10.10.1180 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAN1, winged-helix domain | 0.58 | 39.0 | 4.27e-01 | 89.4% | 84.7% |
| 3iabB01 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.55 | 36.0 | 3.89e-01 | 92.7% | 79.8% |
| 2ek0A00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.55 | 34.0 | 3.80e-01 | 93.5% | 82.2% |
| 2bkyX00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.55 | 33.0 | 3.70e-01 | 91.1% | 81.4% |
| 3duwA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 34.0 | 2.85e-01 | 91.9% | 34.7% |
| 4oo1I01 | 2.40.50.880 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 33.0 | 4.04e-01 | 95.1% | 100.0% |
| 3c0wA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.53 | 36.0 | 3.65e-01 | 100.0% | 70.8% |
| 8cwoF01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.52 | 30.0 | 3.38e-01 | 83.7% | 73.3% |
| 3qwuA03 | 3.30.70.2160 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 34.0 | 3.30e-01 | 98.4% | 58.3% |
| 2jv2A00 | 3.10.330.10 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.51 | 25.0 | 2.98e-01 | 95.9% | 67.1% |
| 3ce8A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 27.0 | 3.07e-01 | 89.4% | 66.3% |
ECOD (55)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2635 | 101.1.2.41 ↗ | alpha arrays › HTH › HTH › winged helix domain › FokI_dom_2 | 0.90 | 82.0 | 7.86e-01 | 100.0% | 84.8% |
| 4201034 | 101.1.2.41 ↗ | alpha arrays › HTH › HTH › winged helix domain › FokI_dom_2 | 0.90 | 86.0 | 7.92e-01 | 100.0% | 84.7% |
| 5017942 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.87 | 50.0 | 5.59e-01 | 98.4% | 71.0% |
| 5041736 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.85 | 51.0 | 6.51e-01 | 92.7% | 100.0% |
| 4980261 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.84 | 55.0 | 5.96e-01 | 100.0% | 78.1% |
| 4947062 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 54.0 | 6.13e-01 | 100.0% | 85.3% |
| 4959599 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.83 | 56.0 | 5.90e-01 | 100.0% | 74.6% |
| 5035685 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.82 | 56.0 | 5.61e-01 | 100.0% | 68.5% |
| 4970516 | 2003.6.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like | 0.82 | 53.0 | 5.08e-01 | 100.0% | 57.9% |
| 4964256 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.82 | 56.0 | 5.60e-01 | 100.0% | 68.8% |
| 4978826 | 873.1.1.18 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HTH_24 | 0.80 | 50.0 | 4.02e-01 | 100.0% | 35.6% |
| 5016748 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.78 | 48.0 | 4.90e-01 | 98.4% | 63.3% |
| 4988082 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 44.0 | 5.75e-01 | 97.6% | 98.6% |
| 4966558 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 50.0 | 6.08e-01 | 100.0% | 98.8% |
| 5026539 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 46.0 | 5.29e-01 | 92.7% | 83.3% |
| 4508433 | 314.1.1.3 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2d | 0.74 | 46.0 | 3.18e-01 | 97.6% | 20.5% |
| 5076338 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.73 | 55.0 | 4.72e-01 | 100.0% | 51.9% |
| 4957324 | 101.1.2.920 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_TbsP_C | 0.69 | 46.0 | 4.66e-01 | 100.0% | 67.2% |
| 3586609 | 101.1.2.278 ↗ | alpha arrays › HTH › HTH › winged helix domain › CNDH2_C | 0.69 | 45.0 | 4.60e-01 | 99.2% | 68.1% |
| 3718412 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 51.0 | 3.73e-01 | 99.2% | 31.5% |
| None | — | 0.68 | 43.0 | 2.97e-01 | 99.2% | 20.8% | |
| 4971999 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 53.0 | 5.33e-01 | 100.0% | 81.6% |
| 4983906 | 101.1.2.554 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30184 | 0.66 | 48.0 | 5.41e-01 | 100.0% | 96.8% |
| 4117256 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.65 | 47.0 | 4.68e-01 | 98.4% | 70.8% |
| 3319155 | 101.1.4.12 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › MSC | 0.65 | 48.0 | 3.60e-01 | 100.0% | 33.2% |
| 3405388 | 101.1.2.664 ↗ | alpha arrays › HTH › HTH › winged helix domain › B-block_TFIIIC, WH_GTF3C1_N | 0.65 | 48.0 | 3.29e-01 | 100.0% | 23.2% |
| 4972556 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 43.0 | 5.08e-01 | 92.7% | 98.8% |
| 3625937 | 101.1.2.216 ↗ | alpha arrays › HTH › HTH › winged helix domain › CED4_WHD | 0.62 | 45.0 | 4.26e-01 | 100.0% | 62.7% |
| 3481547 | 101.1.2.68 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 | 0.61 | 48.0 | 4.44e-01 | 95.1% | 66.7% |
| 4325040 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.59 | 46.0 | 4.52e-01 | 100.0% | 76.9% |
| 3784677 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.59 | 42.0 | 3.40e-01 | 97.6% | 40.5% |
| 4310506 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.59 | 41.0 | 3.35e-01 | 96.7% | 39.1% |
| 3840298 | 101.1.2.394 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 | 0.59 | 46.0 | 4.58e-01 | 91.9% | 77.7% |
| 4971398 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.59 | 41.0 | 4.33e-01 | 100.0% | 80.9% |
| 5064977 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 38.0 | 4.51e-01 | 91.9% | 100.0% |
| 3831895 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.58 | 42.0 | 3.22e-01 | 97.6% | 33.5% |
| 3187043 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 40.0 | 4.61e-01 | 97.6% | 97.8% |
| 3604508 | 304.8.1.4 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C | 0.57 | 30.0 | 3.40e-01 | 90.2% | 65.6% |
| 4012436 | 101.1.2.65 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 | 0.57 | 40.0 | 4.49e-01 | 97.6% | 93.7% |
| 4940944 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.55 | 37.0 | 3.75e-01 | 100.0% | 68.8% |
| 5022277 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.54 | 39.0 | 3.85e-01 | 100.0% | 70.0% |
| 3926827 | 101.1.2.394 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 | 0.54 | 50.0 | 3.20e-01 | 100.0% | 28.2% |
| 4538250 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.54 | 38.0 | 3.77e-01 | 100.0% | 67.4% |
| 5052597 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.54 | 38.0 | 3.69e-01 | 100.0% | 64.3% |
| 3501318 | 101.1.2.394 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 | 0.54 | 50.0 | 3.45e-01 | 100.0% | 63.8% |
| 5030500 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.54 | 38.0 | 3.69e-01 | 100.0% | 64.3% |
| 3471357 | 304.133.1.0 ↗ | a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein | 0.54 | 33.0 | 3.40e-01 | 89.4% | 61.7% |
| 3468223 | 101.1.2.90 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_9 | 0.53 | 50.0 | 3.51e-01 | 100.0% | 85.2% |
| 3306699 | 101.1.2.517 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD | 0.53 | 50.0 | 3.40e-01 | 100.0% | 81.7% |
| 3549847 | 101.1.2.394 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 | 0.51 | 47.0 | 3.29e-01 | 100.0% | 46.7% |
| 3811740 | 2003.1.5.14 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_3 | 0.51 | 34.0 | 2.76e-01 | 91.9% | 33.5% |
| 3479702 | 304.44.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 | 0.51 | 29.0 | 3.08e-01 | 91.1% | 61.9% |
| 4029392 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.51 | 47.0 | 4.02e-01 | 98.4% | 84.3% |
| 4975579 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.50 | 39.0 | 3.66e-01 | 100.0% | 65.8% |
| 3413597 | 101.1.2.394 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 | 0.50 | 46.0 | 3.31e-01 | 100.0% | 47.0% |
D3
high
residues 288-389
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16902.12 best | FokI_D3 | 52.1 | 8.30e-14 | 65.7% | 94.0% |
CATH (54)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fokA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 68.0 | 7.33e-01 | 86.3% | 100.0% |
| 1biaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 50.0 | 6.17e-01 | 73.5% | 100.0% |
| 2fnaA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 55.0 | 6.34e-01 | 78.4% | 98.6% |
| 2do7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 54.0 | 6.00e-01 | 72.5% | 96.2% |
| 4esbA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 55.0 | 5.57e-01 | 76.5% | 90.3% |
| 5h20A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 56.0 | 5.65e-01 | 78.4% | 89.3% |
| 3bz6A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 52.0 | 5.82e-01 | 76.5% | 92.3% |
| 2l4mA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 47.0 | 5.61e-01 | 78.4% | 95.7% |
| 4ejoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 54.0 | 5.28e-01 | 76.5% | 78.6% |
| 6abqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 54.0 | 5.39e-01 | 76.5% | 84.9% |
| 3b73B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 52.0 | 5.49e-01 | 84.3% | 83.1% |
| 4mqvA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 46.0 | 5.58e-01 | 76.5% | 100.0% |
| 2zj2A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 51.0 | 5.58e-01 | 72.5% | 100.0% |
| 3l7wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 54.0 | 5.42e-01 | 78.4% | 87.6% |
| 3o2pE00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 49.0 | 5.30e-01 | 70.6% | 88.4% |
| 4jqfA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 49.0 | 5.67e-01 | 70.6% | 100.0% |
| 3mwmA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 49.0 | 5.53e-01 | 71.6% | 96.0% |
| 3eyyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 52.0 | 5.77e-01 | 78.4% | 95.1% |
| 1sd4A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 44.0 | 5.43e-01 | 73.5% | 100.0% |
| 2eshA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 54.0 | 5.21e-01 | 79.4% | 84.2% |
| 1p6rA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 49.0 | 5.39e-01 | 82.4% | 89.0% |
| 2v7fA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 56.0 | 5.01e-01 | 84.3% | 79.9% |
| 3gw2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 51.0 | 5.33e-01 | 82.4% | 82.8% |
| 3elkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 59.0 | 5.84e-01 | 90.2% | 99.0% |
| 4gcvC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 52.0 | 4.70e-01 | 79.4% | 64.5% |
| 2zkzC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 50.0 | 5.34e-01 | 83.3% | 87.4% |
| 2xigA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 53.0 | 5.53e-01 | 80.4% | 90.1% |
| 1mzbA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 52.0 | 5.70e-01 | 80.4% | 98.8% |
| 2fe3B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 51.0 | 5.55e-01 | 78.4% | 95.3% |
| 1w5sA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 59.0 | 5.92e-01 | 92.2% | 100.0% |
| 2j5oA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 41.0 | 4.83e-01 | 74.5% | 92.3% |
| 4mtdD01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 50.0 | 5.34e-01 | 79.4% | 89.8% |
| 2d1hB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 49.0 | 5.07e-01 | 83.3% | 79.6% |
| 5y6iA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 46.0 | 5.24e-01 | 70.6% | 97.3% |
| 2co5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 51.0 | 5.34e-01 | 80.4% | 92.4% |
| 5nl9A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 48.0 | 5.21e-01 | 75.5% | 92.9% |
| 1fnnB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 56.0 | 5.65e-01 | 92.2% | 98.1% |
| 2qbyA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 52.0 | 5.57e-01 | 83.3% | 100.0% |
| 1u5tB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 44.0 | 5.05e-01 | 72.5% | 100.0% |
| 3f6oB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 47.0 | 4.98e-01 | 83.3% | 83.5% |
| 4etsA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 49.0 | 5.28e-01 | 79.4% | 93.1% |
| 1stzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 49.0 | 5.31e-01 | 83.3% | 95.3% |
| 2qvoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 50.0 | 5.42e-01 | 86.3% | 96.6% |
| 5hvqC02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 50.0 | 5.11e-01 | 85.3% | 93.9% |
| 3m8eA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 49.0 | 4.99e-01 | 91.2% | 91.1% |
| 3gz5B02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 41.0 | 4.61e-01 | 81.4% | 98.6% |
| 4tv7D01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 41.0 | 4.41e-01 | 73.5% | 88.2% |
| 3h20A04 | 1.10.1240.50 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.57 | 38.0 | 4.08e-01 | 77.5% | 79.8% |
| 1hkgA03 | 3.40.367.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › | 0.56 | 42.0 | 3.12e-01 | 79.4% | 43.7% |
| 2o0bA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.56 | 42.0 | 3.37e-01 | 81.4% | 93.0% |
| 2l7kA00 | 1.10.10.1850 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Sporulation protein-like | 0.54 | 37.0 | 4.11e-01 | 92.2% | 94.7% |
| 3k21A02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.51 | 32.0 | 3.74e-01 | 80.4% | 92.6% |
| 3kbbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.51 | 32.0 | 3.61e-01 | 78.4% | 90.0% |
| 3qxfA00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.50 | 37.0 | 2.66e-01 | 78.4% | 97.9% |
ECOD (79)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3165321 | 101.1.2.280 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_12 | 0.82 | 59.0 | 6.25e-01 | 73.5% | 92.2% |
| 4977905 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 51.0 | 6.09e-01 | 75.5% | 94.3% |
| 4525548 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 72.0 | 7.27e-01 | 98.0% | 98.0% |
| 5046208 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 54.0 | 6.24e-01 | 70.6% | 97.3% |
| 5031473 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.79 | 56.0 | 5.54e-01 | 72.5% | 81.0% |
| 4955128 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.79 | 58.0 | 5.13e-01 | 76.5% | 61.8% |
| 5072114 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.79 | 59.0 | 5.15e-01 | 78.4% | 63.3% |
| 4959713 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.79 | 59.0 | 5.83e-01 | 78.4% | 83.3% |
| 5010870 | 101.1.2.181 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM_C | 0.78 | 56.0 | 6.33e-01 | 79.4% | 100.0% |
| 5074949 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 56.0 | 5.91e-01 | 74.5% | 100.0% |
| 4955611 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.77 | 58.0 | 5.79e-01 | 79.4% | 91.3% |
| 5072200 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.77 | 57.0 | 5.68e-01 | 77.5% | 89.5% |
| 5009770 | 101.1.2.181 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM_C | 0.76 | 57.0 | 6.37e-01 | 81.4% | 100.0% |
| 5028427 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.76 | 55.0 | 5.44e-01 | 74.5% | 81.0% |
| 2494143 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.76 | 56.0 | 5.45e-01 | 76.5% | 81.1% |
| 4026717 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 51.0 | 6.00e-01 | 77.5% | 100.0% |
| 2036621 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.75 | 56.0 | 5.65e-01 | 78.4% | 89.3% |
| 3602673 | 2004.1.1.1085 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF30184 | 0.75 | 60.0 | 5.90e-01 | 85.3% | 92.7% |
| 4941351 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 52.0 | 5.67e-01 | 72.5% | 90.6% |
| 4968340 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 56.0 | 5.89e-01 | 79.4% | 100.0% |
| 5078617 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 55.0 | 5.69e-01 | 77.5% | 93.7% |
| 3393016 | 101.1.2.526 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27602 | 0.74 | 52.0 | 5.98e-01 | 74.5% | 98.7% |
| 4995581 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.74 | 54.0 | 5.47e-01 | 75.5% | 93.0% |
| 4940719 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 57.0 | 4.96e-01 | 81.4% | 60.1% |
| 4125762 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.74 | 53.0 | 4.87e-01 | 74.5% | 63.8% |
| 3235950 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 53.0 | 5.58e-01 | 74.5% | 88.9% |
| 5030693 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 59.0 | 5.89e-01 | 85.3% | 87.6% |
| 4994794 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 52.0 | 5.98e-01 | 76.5% | 100.0% |
| 4939871 | 101.1.2.896 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF2551 | 0.73 | 58.0 | 5.81e-01 | 84.3% | 85.7% |
| 4985370 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 51.0 | 5.37e-01 | 71.6% | 83.3% |
| 4631918 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 50.0 | 5.67e-01 | 79.4% | 96.0% |
| 5031460 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.73 | 57.0 | 6.04e-01 | 86.3% | 93.3% |
| 4979487 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 55.0 | 4.93e-01 | 79.4% | 69.3% |
| 5057164 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 54.0 | 5.46e-01 | 81.4% | 79.0% |
| 4965088 | 101.1.2.909 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF5797 | 0.72 | 53.0 | 5.79e-01 | 84.3% | 92.9% |
| 3279756 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.72 | 50.0 | 4.52e-01 | 72.5% | 52.9% |
| 3958566 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.72 | 52.0 | 5.52e-01 | 81.4% | 85.6% |
| 4999546 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.72 | 56.0 | 5.82e-01 | 82.4% | 96.8% |
| 5035624 | 101.1.2.54 ↗ | alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R | 0.72 | 52.0 | 5.58e-01 | 75.5% | 92.9% |
| 4934055 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.71 | 53.0 | 5.90e-01 | 80.4% | 98.8% |
| 3588171 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.70 | 54.0 | 4.80e-01 | 81.4% | 60.0% |
| 5062871 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 56.0 | 5.79e-01 | 84.3% | 93.7% |
| 5075009 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 49.0 | 5.07e-01 | 71.6% | 84.2% |
| 197596 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 49.0 | 5.30e-01 | 72.5% | 94.1% |
| 4932158 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.70 | 51.0 | 5.51e-01 | 76.5% | 97.6% |
| 3929910 | 101.1.2.507 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_TANC1 | 0.70 | 54.0 | 4.69e-01 | 82.4% | 82.6% |
| 4997123 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.70 | 56.0 | 4.39e-01 | 84.3% | 54.5% |
| 4443872 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 57.0 | 5.19e-01 | 87.3% | 88.1% |
| 3971509 | 101.1.2.851 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27731 | 0.69 | 54.0 | 5.67e-01 | 82.4% | 93.3% |
| 5028122 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.69 | 54.0 | 5.00e-01 | 84.3% | 65.4% |
| 3879122 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 55.0 | 5.04e-01 | 84.3% | 88.5% |
| 3713972 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 56.0 | 5.37e-01 | 86.3% | 76.5% |
| 3560879 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 55.0 | 5.12e-01 | 84.3% | 97.6% |
| 4959343 | 101.1.2.181 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM_C | 0.68 | 53.0 | 5.61e-01 | 82.4% | 100.0% |
| 4619500 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.68 | 47.0 | 4.87e-01 | 70.6% | 95.7% |
| 3257129 | 101.1.2.407 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 | 0.68 | 54.0 | 5.13e-01 | 85.3% | 75.0% |
| 3930245 | 101.1.2.407 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 | 0.68 | 54.0 | 5.32e-01 | 86.3% | 86.4% |
| 4943641 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 47.0 | 5.32e-01 | 78.4% | 97.3% |
| 5044327 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 53.0 | 5.43e-01 | 84.3% | 89.0% |
| 5065832 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 53.0 | 5.43e-01 | 83.3% | 97.0% |
| 4997662 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 51.0 | 5.01e-01 | 79.4% | 74.5% |
| 3840296 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 51.0 | 4.90e-01 | 79.4% | 74.8% |
| 4625029 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.67 | 50.0 | 4.99e-01 | 78.4% | 76.2% |
| 3805956 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.67 | 48.0 | 4.97e-01 | 74.5% | 91.4% |
| 3737539 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.67 | 48.0 | 5.27e-01 | 75.5% | 100.0% |
| 3505845 | 101.1.2.407 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 | 0.67 | 54.0 | 5.46e-01 | 87.3% | 94.0% |
| 3808802 | 101.1.2.10 ↗ | alpha arrays › HTH › HTH › winged helix domain › Linker_histone | 0.67 | 47.0 | 5.32e-01 | 74.5% | 100.0% |
| 4983310 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.66 | 56.0 | 5.66e-01 | 89.2% | 93.0% |
| 3439131 | 101.1.2.407 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 | 0.66 | 53.0 | 5.26e-01 | 87.3% | 87.2% |
| 4933236 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 52.0 | 5.13e-01 | 85.3% | 90.0% |
| 4979997 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.66 | 53.0 | 4.81e-01 | 87.3% | 66.4% |
| 4933566 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 50.0 | 5.01e-01 | 81.4% | 81.9% |
| 3921946 | 101.1.2.507 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_TANC1 | 0.65 | 51.0 | 4.45e-01 | 84.3% | 63.2% |
| 3597278 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 44.0 | 4.67e-01 | 70.6% | 80.0% |
| 5000260 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 51.0 | 4.38e-01 | 85.3% | 72.5% |
| 4927328 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 52.0 | 5.44e-01 | 88.2% | 96.8% |
| 3669754 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 51.0 | 4.62e-01 | 89.2% | 89.3% |
| 3550852 | 101.1.2.86 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_Nse1 | 0.63 | 48.0 | 4.88e-01 | 82.4% | 88.0% |
| 3972090 | 101.1.2.668 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF28010 | 0.57 | 42.0 | 4.54e-01 | 83.3% | 96.5% |
D4
high
residues 401-579
Domain cluster:
rep: NC_049448.1__YP_009882481.1__HYP77_gp49__00049__D273-480
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09254.19 best | FokI_cleav_dom | 146.9 | 7.10e-43 | 96.7% | 85.6% |
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fokA03 | 3.40.91.30 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.96 | 91.0 | 9.24e-01 | 96.1% | 99.4% |
| 2ewfA03 | 3.40.91.50 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.77 | 73.0 | 6.71e-01 | 100.0% | 100.0% |
| 2p14A00 | 3.40.91.50 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.75 | 71.0 | 7.00e-01 | 98.9% | 100.0% |
| 1y88A01 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.72 | 49.0 | 5.76e-01 | 73.7% | 98.4% |
| 2e52B01 | 3.40.91.70 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Type II restriction endonuclease, HindIII | 0.70 | 65.0 | 6.01e-01 | 98.9% | 85.3% |
| 1ob8A00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.69 | 45.0 | 5.53e-01 | 81.0% | 100.0% |
| 1gefA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.68 | 44.0 | 5.35e-01 | 83.8% | 98.3% |
| 4nicA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 41.0 | 5.01e-01 | 87.2% | 94.9% |
| 4bxoA01 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.64 | 42.0 | 4.75e-01 | 79.9% | 86.7% |
| 3geeA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 41.0 | 4.68e-01 | 81.6% | 87.2% |
| 2eo0B00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.62 | 41.0 | 4.87e-01 | 80.4% | 96.0% |
| 1dc1A01 | 3.40.91.10 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.60 | 49.0 | 4.60e-01 | 86.6% | 90.5% |
| 2a3nA01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.58 | 38.0 | 3.98e-01 | 80.4% | 72.2% |
| 3ucxA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 46.0 | 4.07e-01 | 87.7% | 94.2% |
| 2q9uA02 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.55 | 41.0 | 4.45e-01 | 83.8% | 95.2% |
| 5lddC00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 43.0 | 4.50e-01 | 83.2% | 92.3% |
| 2cxxA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 43.0 | 4.29e-01 | 82.7% | 94.6% |
| 1rznA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.53 | 42.0 | 4.55e-01 | 87.7% | 99.3% |
| 3jx9A00 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.53 | 37.0 | 3.81e-01 | 83.2% | 73.4% |
| 3fxaA00 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.52 | 42.0 | 4.18e-01 | 86.0% | 84.8% |
| 4s1wB01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.51 | 41.0 | 4.01e-01 | 84.4% | 81.2% |
| 2nutA03 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.50 | 40.0 | 3.61e-01 | 84.4% | 96.1% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 11018 | 2008.1.1.44 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › FokI_cleav_dom | 0.96 | 93.0 | 9.00e-01 | 98.3% | 92.2% |
| 4373997 | 2008.1.1.44 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › FokI_cleav_dom | 0.94 | 91.0 | 8.70e-01 | 100.0% | 92.5% |
| 4968619 | 2008.1.1.44 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › FokI_cleav_dom | 0.76 | 71.0 | 7.04e-01 | 98.3% | 94.1% |
| 5074234 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.75 | 68.0 | 6.05e-01 | 97.2% | 96.0% |
| 4975459 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.72 | 59.0 | 6.35e-01 | 95.5% | 98.1% |
| 4991917 | 2008.1.1.107 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NERD | 0.72 | 54.0 | 6.06e-01 | 91.6% | 97.9% |
| 4947569 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.72 | 57.0 | 6.11e-01 | 92.2% | 94.8% |
| 4956304 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.70 | 59.0 | 5.68e-01 | 94.4% | 78.5% |
| 4983302 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.70 | 52.0 | 5.85e-01 | 88.3% | 97.9% |
| 5076295 | 2008.1.1.107 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NERD | 0.69 | 51.0 | 5.83e-01 | 83.8% | 100.0% |
| 4942425 | 2008.1.1.141 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 | 0.68 | 46.0 | 5.41e-01 | 82.1% | 96.8% |
| 4089106 | 2008.1.1.141 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 | 0.67 | 46.0 | 5.38e-01 | 84.4% | 96.9% |
| 5049398 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.66 | 47.0 | 5.14e-01 | 78.8% | 86.7% |
| 3602325 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.66 | 45.0 | 5.30e-01 | 89.4% | 98.4% |
| 4945329 | 2008.1.1.107 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NERD | 0.63 | 57.0 | 5.34e-01 | 96.1% | 87.9% |
| 3235584 | 7590.1.1.2 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi | 0.62 | 42.0 | 4.36e-01 | 88.3% | 72.7% |
| 11016 | 2008.1.1.38 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Endonuc-BsobI | 0.60 | 49.0 | 4.09e-01 | 86.6% | 93.2% |
| 4929046 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 51.0 | 4.74e-01 | 89.9% | 99.1% |
| 4008677 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.58 | 50.0 | 4.16e-01 | 91.1% | 91.3% |
| 4981147 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.57 | 44.0 | 4.56e-01 | 78.8% | 100.0% |
| 3714866 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.56 | 48.0 | 5.03e-01 | 93.9% | 99.4% |
| 4997752 | 2004.1.1.164 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Roc | 0.56 | 44.0 | 4.50e-01 | 82.7% | 86.3% |
| 4956618 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 43.0 | 4.33e-01 | 82.1% | 84.9% |
| 3683056 | 7590.1.1.7 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › MID_MedPIWI | 0.54 | 45.0 | 4.33e-01 | 87.7% | 80.5% |
| 4057083 | 2008.1.1.23 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › BsuBI_PstI_RE | 0.54 | 46.0 | 4.71e-01 | 93.9% | 93.5% |
| 3584099 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.54 | 44.0 | 4.29e-01 | 87.7% | 88.0% |
| 5026362 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.53 | 45.0 | 4.71e-01 | 88.3% | 97.0% |
| 136576 | 2007.6.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › DUF2529 | 0.53 | 37.0 | 3.81e-01 | 83.2% | 73.4% |
| 4377748 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.53 | 43.0 | 4.41e-01 | 84.4% | 91.2% |
| 3470214 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.53 | 44.0 | 4.14e-01 | 88.3% | 90.2% |
| 3242288 | 2008.6.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains | 0.52 | 46.0 | 4.66e-01 | 95.5% | 95.6% |
| 5071401 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.52 | 42.0 | 4.38e-01 | 85.5% | 93.5% |
| 5065636 | 2007.3.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 | 0.52 | 40.0 | 4.23e-01 | 86.0% | 91.6% |
| 3937689 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.52 | 41.0 | 4.40e-01 | 84.9% | 97.3% |
| 3583992 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.52 | 43.0 | 4.21e-01 | 88.3% | 90.3% |
| 3945689 | 2007.6.1.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS | 0.51 | 41.0 | 3.89e-01 | 84.4% | 75.7% |
| 4174054 | 2007.6.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS_2 | 0.50 | 38.0 | 3.58e-01 | 79.9% | 68.9% |