←Back to structures
SRR1747018_scaffold_2_1202_curated_prodigal-single.1__X__X__00505
Bact-VirSRR1747018_scaffold_2_1202_curated_prodigal-single.1__X__X__00505
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 15-177
Domain cluster:
rep: IMGVR_UViG_3300033153_012907-3300033153-Ga0366824_102808127__D27-122_188-212
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07669.18 best | Eco57I | 67.7 | 1.90e-18 | 81.6% | 57.1% |
| PF02384.23 | N6_Mtase | 26.1 | 7.20e-06 | 65.6% | 30.9% |
D2
medium
residues 178-252
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4aghA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.59 | 38.0 | 3.74e-01 | 89.3% | 61.3% |
| 4ckmB00 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.51 | 41.0 | 3.41e-01 | 92.0% | 88.2% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4997523 | 2003.1.5.62 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Eco57I | 0.77 | 60.0 | 3.63e-01 | 82.7% | 16.1% |
| 4948425 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.74 | 52.0 | 3.92e-01 | 73.3% | 38.5% |
| 3957602 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.67 | 55.0 | 3.93e-01 | 89.3% | 49.8% |
| 4961865 | 2003.1.5.62 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Eco57I | 0.66 | 58.0 | 3.58e-01 | 98.7% | 25.0% |
| 4999846 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.64 | 51.0 | 3.51e-01 | 88.0% | 32.7% |
| 5066674 | 3111.1.1.0 ↗ | beta barrels › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain | 0.58 | 40.0 | 3.54e-01 | 84.0% | 47.8% |
| 4996145 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.52 | 37.0 | 3.22e-01 | 76.0% | 60.8% |
| 5082269 | 268.1.1.1 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 | 0.51 | 36.0 | 3.28e-01 | 74.7% | 66.7% |
| 4161010 | 2487.1.1.1 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › Cpn60_TCP1 | 0.51 | 40.0 | 3.35e-01 | 88.0% | 95.0% |
| 3240522 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.51 | 39.0 | 2.97e-01 | 86.7% | 81.0% |
| 3602019 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.50 | 40.0 | 3.45e-01 | 90.7% | 91.5% |
D3
medium
residues 260-448
Domain cluster:
rep: pig_ID_445_F78_scaffold_208_curated_prodigal-single.1__X__X__00194__D227-399
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ydxA03 | 3.90.220.20 | Alpha Beta › Alpha-Beta Complex › Adenine-n6-DNA-methyltransferase TaqI; Chain A, domain 2 › DNA methylase specificity domains | 0.75 | 48.0 | 5.50e-01 | 100.0% | 84.0% |
| 7vruC01 | 3.90.220.20 | Alpha Beta › Alpha-Beta Complex › Adenine-n6-DNA-methyltransferase TaqI; Chain A, domain 2 › DNA methylase specificity domains | 0.72 | 55.0 | 5.77e-01 | 100.0% | 86.1% |
| 1yf2A03 | 3.90.220.20 | Alpha Beta › Alpha-Beta Complex › Adenine-n6-DNA-methyltransferase TaqI; Chain A, domain 2 › DNA methylase specificity domains | 0.71 | 52.0 | 5.85e-01 | 99.5% | 95.9% |
| 7btoI02 | 3.90.220.20 | Alpha Beta › Alpha-Beta Complex › Adenine-n6-DNA-methyltransferase TaqI; Chain A, domain 2 › DNA methylase specificity domains | 0.71 | 52.0 | 5.42e-01 | 100.0% | 81.1% |
| 1yf2A01 | 3.90.220.20 | Alpha Beta › Alpha-Beta Complex › Adenine-n6-DNA-methyltransferase TaqI; Chain A, domain 2 › DNA methylase specificity domains | 0.68 | 50.0 | 5.26e-01 | 100.0% | 83.0% |
| 1vaeA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.51 | 22.0 | 2.74e-01 | 97.4% | 62.2% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3838237 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.88 | 74.0 | 7.77e-01 | 100.0% | 93.7% |
| 4946140 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.85 | 82.0 | 6.49e-01 | 100.0% | 60.3% |
| 3166402 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.83 | 80.0 | 6.83e-01 | 100.0% | 73.4% |
| 2785021 | 4333.1.1.2 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › TaqI_C | 0.83 | 79.0 | 6.94e-01 | 100.0% | 75.9% |
| 5001323 | 4333.1.1.2 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › TaqI_C | 0.82 | 78.0 | 6.51e-01 | 100.0% | 70.5% |
| 3604092 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.82 | 78.0 | 6.99e-01 | 100.0% | 81.2% |
| 5051402 | 4333.1.1.2 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › TaqI_C | 0.81 | 64.0 | 5.53e-01 | 100.0% | 55.4% |
| 4999709 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.80 | 76.0 | 6.53e-01 | 100.0% | 69.3% |
| 5046633 | 4333.1.1.2 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › TaqI_C | 0.80 | 62.0 | 5.57e-01 | 100.0% | 61.2% |
| 4588826 | 4333.1.1.2 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › TaqI_C | 0.79 | 75.0 | 6.55e-01 | 100.0% | 79.2% |
| 4946360 | 4333.1.1.2 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › TaqI_C | 0.78 | 62.0 | 6.27e-01 | 100.0% | 82.7% |
| 4656227 | 4333.1.1.2 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › TaqI_C | 0.75 | 71.0 | 6.46e-01 | 100.0% | 91.8% |
| 4276327 | 4333.1.1.2 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › TaqI_C | 0.75 | 71.0 | 6.31e-01 | 100.0% | 76.5% |
| 4968432 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.75 | 71.0 | 6.36e-01 | 100.0% | 76.4% |
| 4279553 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.74 | 50.0 | 5.48e-01 | 100.0% | 81.2% |
| 4930115 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.74 | 58.0 | 5.68e-01 | 100.0% | 74.6% |
| 4458448 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.74 | 49.0 | 4.00e-01 | 100.0% | 38.5% |
| 4989315 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.74 | 58.0 | 4.37e-01 | 100.0% | 36.9% |
| 5032020 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.74 | 49.0 | 4.88e-01 | 100.0% | 64.0% |
| 4979846 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.73 | 60.0 | 5.67e-01 | 100.0% | 72.7% |
| 4946597 | 4333.1.1.2 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › TaqI_C | 0.73 | 64.0 | 5.76e-01 | 100.0% | 68.8% |
| 4586572 | 4333.1.1.6 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › M_Eco57I_C | 0.73 | 69.0 | 6.21e-01 | 100.0% | 77.2% |
| 4157881 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.73 | 49.0 | 5.21e-01 | 100.0% | 75.9% |
| 7667 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.72 | 48.0 | 4.97e-01 | 100.0% | 70.2% |
| 5012794 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.72 | 68.0 | 5.41e-01 | 100.0% | 90.1% |
| 3988205 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.72 | 51.0 | 5.02e-01 | 100.0% | 67.5% |
| 3987436 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.72 | 56.0 | 4.15e-01 | 100.0% | 34.4% |
| 4266827 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.72 | 48.0 | 3.79e-01 | 100.0% | 33.9% |
| 4937813 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.72 | 54.0 | 4.10e-01 | 100.0% | 35.8% |
| 3959398 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.71 | 52.0 | 5.59e-01 | 100.0% | 85.5% |
| 5032021 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.71 | 54.0 | 5.23e-01 | 100.0% | 70.0% |
| 5018504 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.70 | 55.0 | 5.36e-01 | 100.0% | 75.1% |
| 4997331 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.69 | 54.0 | 5.32e-01 | 100.0% | 75.5% |
| 5071301 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.69 | 52.0 | 5.45e-01 | 100.0% | 84.6% |
| 5002484 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.68 | 50.0 | 4.88e-01 | 100.0% | 68.1% |
| 86552 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.68 | 51.0 | 4.82e-01 | 100.0% | 65.9% |
| 5053550 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.68 | 62.0 | 5.54e-01 | 100.0% | 72.0% |
| 4006380 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.60 | 57.0 | 4.19e-01 | 100.0% | 92.4% |
| 4963717 | 322.1.1.1 ↗ | a+b two layers › HPr-like › HPr-like › HPr-like › PTS-HPr | 0.53 | 23.0 | 3.23e-01 | 73.0% | 82.2% |