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SRR1747018_scaffold_396_prodigal-single.1__X__X__00012
Bact-VirSRR1747018_scaffold_396_prodigal-single.1__X__X__00012
Identity
- Kingdom:
- phage
Quality
84.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-56
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1j2oA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.80 | 52.0 | 3.92e-01 | 72.0% | 28.9% |
| 2gviA03 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.77 | 49.0 | 5.67e-01 | 70.0% | 97.1% |
| 2cuqA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.73 | 50.0 | 4.27e-01 | 72.0% | 55.0% |
| 2darA01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.72 | 54.0 | 4.72e-01 | 80.0% | 63.9% |
| 2dloA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.72 | 52.0 | 4.37e-01 | 76.0% | 50.6% |
| 4hi8B00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.72 | 50.0 | 4.47e-01 | 74.0% | 62.5% |
| 2dj7A00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.71 | 50.0 | 4.25e-01 | 74.0% | 55.0% |
| 6u4mA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.71 | 52.0 | 4.75e-01 | 78.0% | 63.1% |
| 2xqnT01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.71 | 54.0 | 5.03e-01 | 82.0% | 75.8% |
| 2mbvA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.69 | 46.0 | 3.78e-01 | 70.0% | 43.8% |
| 3lrqB00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.69 | 48.0 | 4.12e-01 | 74.0% | 47.5% |
| 1x6aA01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.68 | 47.0 | 4.44e-01 | 74.0% | 75.8% |
| 1wigA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.67 | 47.0 | 4.17e-01 | 74.0% | 65.8% |
| 1v6gA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.66 | 54.0 | 4.66e-01 | 94.0% | 56.8% |
| 2d8xA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.66 | 48.0 | 4.37e-01 | 80.0% | 65.7% |
| 1x68A00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.64 | 44.0 | 3.90e-01 | 74.0% | 59.2% |
| 4ijjB00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.62 | 45.0 | 3.36e-01 | 80.0% | 88.5% |
| 2cklB01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.61 | 42.0 | 3.83e-01 | 74.0% | 52.1% |
| 2cklA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.59 | 41.0 | 3.42e-01 | 76.0% | 40.8% |
| 4g2uA00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.53 | 43.0 | 2.90e-01 | 92.0% | 86.2% |
| 1t90A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.53 | 44.0 | 2.77e-01 | 94.0% | 63.2% |
| 3f2gA00 | 3.30.450.410 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.52 | 40.0 | 2.71e-01 | 86.0% | 34.6% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3800034 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.84 | 56.0 | 6.58e-01 | 76.0% | 100.0% |
| 5021070 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.81 | 53.0 | 6.06e-01 | 72.0% | 97.1% |
| 3883765 | 376.1.2.17 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › LIM+PET | 0.79 | 54.0 | 4.17e-01 | 72.0% | 65.4% |
| 3911587 | 376.1.2.6 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › PET | 0.78 | 58.0 | 4.42e-01 | 78.0% | 68.6% |
| 3567498 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.78 | 51.0 | 5.86e-01 | 70.0% | 97.1% |
| 3776782 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.78 | 57.0 | 4.92e-01 | 78.0% | 94.7% |
| 3507148 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.78 | 55.0 | 5.15e-01 | 74.0% | 78.3% |
| 3479199 | 376.1.1.52 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › LIM | 0.77 | 54.0 | 4.82e-01 | 74.0% | 79.4% |
| None | — | 0.76 | 61.0 | 4.37e-01 | 86.0% | 57.8% | |
| 3395115 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.76 | 53.0 | 5.02e-01 | 74.0% | 75.0% |
| 4001927 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.76 | 61.0 | 3.99e-01 | 86.0% | 55.9% |
| 3863831 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.76 | 60.0 | 3.94e-01 | 86.0% | 63.3% |
| None | — | 0.75 | 60.0 | 4.37e-01 | 86.0% | 58.5% | |
| 3211163 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.75 | 59.0 | 4.80e-01 | 84.0% | 50.0% |
| 4940040 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.75 | 50.0 | 5.23e-01 | 72.0% | 75.6% |
| 3624551 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.75 | 56.0 | 5.67e-01 | 80.0% | 90.0% |
| 3877265 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.75 | 60.0 | 4.17e-01 | 86.0% | 48.4% |
| 3874836 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.74 | 57.0 | 5.33e-01 | 82.0% | 91.7% |
| 3526067 | 376.1.2.17 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › LIM+PET | 0.74 | 59.0 | 3.93e-01 | 86.0% | 68.9% |
| 3210662 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.74 | 60.0 | 5.08e-01 | 88.0% | 97.5% |
| 3481280 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.74 | 51.0 | 4.85e-01 | 74.0% | 76.7% |
| 3473098 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.73 | 51.0 | 4.82e-01 | 74.0% | 76.7% |
| 5046967 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.73 | 51.0 | 5.53e-01 | 78.0% | 92.5% |
| 4117447 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.72 | 61.0 | 3.82e-01 | 92.0% | 88.0% |
| 3565188 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.71 | 48.0 | 4.82e-01 | 70.0% | 70.0% |
| 5067072 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.71 | 51.0 | 5.12e-01 | 76.0% | 88.0% |
| 3481270 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.68 | 52.0 | 3.39e-01 | 84.0% | 70.9% |
| 4959872 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.67 | 46.0 | 5.01e-01 | 72.0% | 100.0% |
| 3571808 | 376.1.2.17 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › LIM+PET | 0.64 | 54.0 | 3.46e-01 | 94.0% | 63.8% |
| 3697192 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.63 | 49.0 | 4.65e-01 | 92.0% | 100.0% |
| 3715448 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.61 | 45.0 | 3.24e-01 | 80.0% | 39.3% |
| 3696699 | 376.1.1.125 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2, zf-RING_UBOX | 0.53 | 45.0 | 3.21e-01 | 100.0% | 79.4% |