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SRR1747018_scaffold_396_prodigal-single.1__X__X__00034
Bact-VirSRR1747018_scaffold_396_prodigal-single.1__X__X__00034
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-115
Domain cluster:
rep: SRR1747018_scaffold_0_prodigal-single.1__X__X__00012__D91-170
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF18894.7 best | PhageMetallopep | 85.2 | 5.60e-24 | 100.0% | 89.3% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4jixB00 | 3.30.2010.10 | Alpha Beta › 2-Layer Sandwich › Zincin-like › "Metalloproteases (""zincins""), catalytic domain" | 0.84 | 54.0 | 5.66e-01 | 86.8% | 71.2% |
| 3cqbB01 | 3.30.2010.10 | Alpha Beta › 2-Layer Sandwich › Zincin-like › "Metalloproteases (""zincins""), catalytic domain" | 0.73 | 54.0 | 5.91e-01 | 88.6% | 92.6% |
| 3e11A00 | 3.30.2010.20 | Alpha Beta › 2-Layer Sandwich › Zincin-like › | 0.67 | 55.0 | 5.53e-01 | 91.2% | 88.6% |
| 4l63A00 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.66 | 59.0 | 4.45e-01 | 93.9% | 63.9% |
| 1lmlA01 | 3.10.170.20 | Alpha Beta › Roll › Elastase; domain 1 › | 0.65 | 49.0 | 4.27e-01 | 78.9% | 90.0% |
| 2ejqB00 | 3.30.2010.20 | Alpha Beta › 2-Layer Sandwich › Zincin-like › | 0.65 | 55.0 | 5.58e-01 | 92.1% | 90.4% |
| 3go5A04 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 21.0 | 2.89e-01 | 78.9% | 60.3% |
| 3wz2B00 | 3.40.50.10900 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PAC-like subunit | 0.59 | 44.0 | 3.55e-01 | 79.8% | 77.2% |
| 4l7aA00 | 3.40.390.70 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › | 0.57 | 51.0 | 3.93e-01 | 99.1% | 70.1% |
| 1ka2A00 | 1.10.1370.30 | Mainly Alpha › Orthogonal Bundle › Neurolysin; domain 3 › | 0.55 | 50.0 | 3.26e-01 | 100.0% | 91.1% |
| 4on1A02 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.51 | 42.0 | 3.61e-01 | 91.2% | 70.8% |
| 2oqtD00 | 3.40.930.10 | Alpha Beta › 3-Layer(aba) Sandwich › Mannitol-specific EII; Chain A › Mannitol-specific EII; Chain A | 0.51 | 42.0 | 3.86e-01 | 91.2% | 68.6% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4991663 | 2498.1.1.49 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › PhageMetallopep | 0.85 | 72.0 | 6.94e-01 | 91.2% | 80.0% |
| 5010106 | 2498.1.1.49 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › PhageMetallopep | 0.83 | 73.0 | 7.02e-01 | 92.1% | 83.2% |
| 3943873 | 2498.1.1.49 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › PhageMetallopep | 0.83 | 78.0 | 6.56e-01 | 100.0% | 90.6% |
| 4993689 | 2498.1.1.49 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › PhageMetallopep | 0.81 | 70.0 | 6.74e-01 | 89.5% | 83.2% |
| 3959513 | 2498.1.1.10 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 | 0.78 | 51.0 | 4.84e-01 | 78.9% | 57.0% |
| 3959412 | 2498.1.1.10 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 | 0.77 | 56.0 | 5.45e-01 | 88.6% | 68.8% |
| 185135 | 2498.1.1.10 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 | 0.74 | 54.0 | 5.72e-01 | 88.6% | 84.2% |
| 4418037 | 2498.1.1.22 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YbeY | 0.70 | 60.0 | 5.46e-01 | 92.1% | 86.6% |
| 4097525 | 2498.1.1.22 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YbeY | 0.69 | 59.0 | 5.35e-01 | 91.2% | 84.0% |
| 5075577 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.68 | 58.0 | 5.28e-01 | 89.5% | 72.4% |
| 11497 | 2498.1.1.32 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Zincin_1 | 0.67 | 55.0 | 5.55e-01 | 91.2% | 89.4% |
| 4436115 | 2498.1.1.10 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 | 0.67 | 61.0 | 4.48e-01 | 98.2% | 76.1% |
| 3476221 | 2498.1.1.14 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 | 0.67 | 60.0 | 3.92e-01 | 98.2% | 72.0% |
| 4984419 | 2498.1.1.10 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 | 0.66 | 60.0 | 4.60e-01 | 98.2% | 83.5% |
| 1211453 | 2498.1.1.23 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M49 | 0.66 | 60.0 | 3.65e-01 | 100.0% | 48.2% |
| 5044525 | 2498.1.1.10 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 | 0.65 | 60.0 | 4.33e-01 | 98.2% | 87.0% |
| 4679579 | 2498.1.1.22 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YbeY | 0.65 | 55.0 | 5.07e-01 | 91.2% | 85.5% |
| 4943050 | 2498.1.1.10 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 | 0.64 | 59.0 | 4.25e-01 | 98.2% | 75.0% |
| 3610569 | 2498.1.1.14 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 | 0.64 | 58.0 | 3.86e-01 | 99.1% | 76.2% |
| 4519029 | 2498.1.1.10 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 | 0.64 | 58.0 | 4.27e-01 | 98.2% | 68.6% |
| 3473808 | 2498.1.1.14 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 | 0.63 | 49.0 | 3.32e-01 | 80.7% | 71.1% |
| 5068012 | 2498.1.1.10 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 | 0.63 | 57.0 | 4.53e-01 | 98.2% | 91.6% |
| 4023297 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.61 | 56.0 | 4.12e-01 | 99.1% | 81.4% |
| 3414090 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.61 | 55.0 | 4.11e-01 | 98.2% | 89.3% |
| 5045338 | 2498.1.1.25 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M6 | 0.60 | 52.0 | 4.20e-01 | 98.2% | 78.3% |
| 5050240 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.59 | 53.0 | 4.17e-01 | 97.4% | 81.3% |
| 4948309 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.59 | 26.0 | 3.28e-01 | 80.7% | 67.2% |
| 5071116 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.59 | 47.0 | 3.70e-01 | 86.0% | 75.4% |
| 4984900 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.58 | 43.0 | 3.48e-01 | 78.9% | 83.9% |
| 5056782 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.55 | 43.0 | 3.45e-01 | 86.0% | 73.8% |
| 4944775 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 34.0 | 3.29e-01 | 70.2% | 56.8% |
| 3990230 | 2498.1.1.4 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Reprolysin | 0.53 | 42.0 | 3.96e-01 | 94.7% | 69.6% |
| 3703913 | 7529.1.1.0 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like | 0.51 | 39.0 | 3.59e-01 | 79.8% | 64.7% |
| 3838257 | 2498.4.1.1 ↗ | mixed a+b and a/b › Zincin-like › HSP90 C-terminal domain (C-terminal part of Pfam 00183) › HSP90 C-terminal domain (C-terminal part of Pfam 00183) › HSP90 | 0.51 | 43.0 | 4.12e-01 | 91.2% | 86.9% |
| 4976117 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.51 | 40.0 | 3.26e-01 | 84.2% | 82.3% |
| 4545329 | 212.1.1.23 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › RNase_E_G | 0.51 | 33.0 | 3.63e-01 | 87.7% | 82.2% |
| 4972302 | 2498.5.1.1 ↗ | mixed a+b and a/b › Zincin-like › GroEL-intermediate domain like › GroEL-intermediate domain like › Cpn60_TCP1 | 0.50 | 30.0 | 3.60e-01 | 86.8% | 94.3% |