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SRR1747018_scaffold_396_prodigal-single.1__X__X__00036
Bact-VirSRR1747018_scaffold_396_prodigal-single.1__X__X__00036
Identity
- Kingdom:
- phage
Quality
85.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 36-78
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1totA00 | 3.30.60.90 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Zinc finger, ZZ-type | 0.68 | 52.0 | 5.06e-01 | 100.0% | 76.9% |
| 2yvrA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.67 | 49.0 | 4.92e-01 | 81.4% | 86.7% |
| 2dsmA00 | 3.30.40.30 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › YqaI domain | 0.65 | 50.0 | 4.36e-01 | 93.0% | 54.2% |
| 1owqA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.65 | 44.0 | 3.89e-01 | 72.1% | 100.0% |
| 2ffwA00 | 4.10.830.40 | Few Secondary Structures › Irregular › 30s Ribosomal Protein S14; Chain N › | 0.64 | 53.0 | 4.49e-01 | 97.7% | 59.0% |
| 3ddtC00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.61 | 44.0 | 4.43e-01 | 81.4% | 90.9% |
| 2bayE00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.61 | 48.0 | 4.55e-01 | 100.0% | 88.1% |
| 2csvA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.61 | 47.0 | 4.07e-01 | 100.0% | 51.4% |
| 2dloA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.60 | 45.0 | 3.84e-01 | 88.4% | 49.4% |
| 3mekA02 | 6.10.140.2220 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 47.0 | 4.57e-01 | 93.0% | 89.8% |
| 4tn3A01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.58 | 44.0 | 4.57e-01 | 100.0% | 95.0% |
| 3gv4A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.58 | 45.0 | 3.72e-01 | 100.0% | 52.5% |
| 3mhsA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.58 | 45.0 | 3.45e-01 | 100.0% | 40.2% |
| 2dj7A00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.58 | 45.0 | 3.84e-01 | 95.3% | 60.0% |
| 3vd6C01 | 3.30.50.10 | Alpha Beta › 2-Layer Sandwich › Erythroid Transcription Factor GATA-1; Chain A › Erythroid Transcription Factor GATA-1, subunit A | 0.57 | 39.0 | 4.01e-01 | 81.4% | 80.5% |
| 4wz0A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.57 | 47.0 | 3.64e-01 | 100.0% | 45.0% |
| 5hkxA04 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 40.0 | 4.07e-01 | 81.4% | 97.7% |
| 2yu4A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 39.0 | 3.35e-01 | 100.0% | 64.9% |
| 4lx3A00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.51 | 36.0 | 3.02e-01 | 86.0% | 88.1% |
ECOD (64)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4396748 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.75 | 56.0 | 3.82e-01 | 100.0% | 22.5% |
| 4093247 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.74 | 55.0 | 3.77e-01 | 100.0% | 22.5% |
| 4190899 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.74 | 57.0 | 3.86e-01 | 100.0% | 22.9% |
| 3759578 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.72 | 57.0 | 5.17e-01 | 100.0% | 63.3% |
| 3806578 | 376.1.1.59 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-B_box | 0.72 | 60.0 | 5.93e-01 | 100.0% | 91.1% |
| 4297767 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.71 | 53.0 | 3.74e-01 | 100.0% | 23.9% |
| 3664680 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.71 | 59.0 | 4.63e-01 | 100.0% | 43.2% |
| 3520329 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.70 | 62.0 | 6.12e-01 | 97.7% | 93.3% |
| 4088673 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.69 | 52.0 | 3.57e-01 | 100.0% | 22.4% |
| 3454962 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.69 | 56.0 | 5.36e-01 | 90.7% | 78.0% |
| 3249935 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.69 | 54.0 | 5.55e-01 | 100.0% | 90.0% |
| 3345514 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.69 | 59.0 | 5.70e-01 | 100.0% | 88.0% |
| 3424317 | 904.1.1.3 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › ANCHR-like_BBOX | 0.69 | 59.0 | 5.89e-01 | 100.0% | 95.6% |
| 3221207 | 376.1.6.8 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › zf-B_box | 0.69 | 57.0 | 5.66e-01 | 100.0% | 97.8% |
| 3411064 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.68 | 57.0 | 5.55e-01 | 100.0% | 98.0% |
| 3347552 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.68 | 59.0 | 5.49e-01 | 100.0% | 80.0% |
| 3822672 | 376.1.1.59 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-B_box | 0.68 | 58.0 | 5.26e-01 | 100.0% | 70.0% |
| 3368882 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.68 | 54.0 | 5.57e-01 | 90.7% | 95.0% |
| 3357823 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.68 | 58.0 | 5.29e-01 | 100.0% | 73.3% |
| 3312159 | 904.1.1.27 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box, ANCHR-like_BBOX | 0.68 | 59.0 | 4.46e-01 | 100.0% | 72.4% |
| 3305957 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.67 | 58.0 | 5.42e-01 | 100.0% | 78.2% |
| 3810319 | 376.1.1.59 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-B_box | 0.67 | 56.0 | 5.60e-01 | 97.7% | 95.6% |
| 4024131 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.67 | 57.0 | 5.47e-01 | 100.0% | 88.0% |
| 3670642 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.67 | 58.0 | 5.09e-01 | 100.0% | 67.7% |
| 3552779 | 904.1.1.3 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › ANCHR-like_BBOX | 0.67 | 57.0 | 5.33e-01 | 100.0% | 81.8% |
| 3662931 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.67 | 58.0 | 5.53e-01 | 100.0% | 84.0% |
| 3498992 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.67 | 52.0 | 3.75e-01 | 100.0% | 28.1% |
| 3806562 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.67 | 57.0 | 5.67e-01 | 100.0% | 95.6% |
| 3874356 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.66 | 58.0 | 5.75e-01 | 100.0% | 95.6% |
| 3361545 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.66 | 57.0 | 4.23e-01 | 100.0% | 37.0% |
| 3264544 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.66 | 55.0 | 4.99e-01 | 100.0% | 68.3% |
| 3915620 | 904.1.1.3 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › ANCHR-like_BBOX | 0.66 | 56.0 | 5.40e-01 | 100.0% | 90.0% |
| 3364276 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.66 | 56.0 | 5.43e-01 | 100.0% | 92.0% |
| 3522307 | 904.1.1.3 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › ANCHR-like_BBOX | 0.66 | 55.0 | 5.48e-01 | 100.0% | 95.6% |
| 3885685 | 904.1.1.11 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-UBP | 0.65 | 56.0 | 5.55e-01 | 100.0% | 93.3% |
| 3816895 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.65 | 53.0 | 5.52e-01 | 93.0% | 100.0% |
| 3537144 | 904.1.1.3 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › ANCHR-like_BBOX | 0.65 | 55.0 | 5.28e-01 | 100.0% | 90.0% |
| 3529691 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.65 | 55.0 | 5.53e-01 | 100.0% | 97.8% |
| 3382637 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.65 | 54.0 | 4.37e-01 | 100.0% | 48.9% |
| 3521610 | 376.1.1.73 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › ANCHR-like_BBOX | 0.64 | 54.0 | 5.27e-01 | 100.0% | 95.9% |
| 4991688 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.64 | 53.0 | 5.08e-01 | 100.0% | 88.7% |
| 3245220 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.64 | 52.0 | 4.90e-01 | 97.7% | 76.4% |
| 3702317 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.63 | 51.0 | 4.62e-01 | 100.0% | 98.5% |
| 3593825 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.62 | 50.0 | 4.20e-01 | 100.0% | 77.6% |
| 3558133 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.62 | 45.0 | 4.12e-01 | 86.0% | 60.0% |
| 4023525 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.61 | 50.0 | 3.98e-01 | 100.0% | 63.0% |
| 3189409 | 376.1.1.66 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_16 | 0.61 | 50.0 | 4.43e-01 | 100.0% | 90.0% |
| 3738423 | 70.3.1.11 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET, zf-MYND | 0.60 | 48.0 | 3.04e-01 | 95.3% | 18.0% |
| 3906547 | 376.1.1.5 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP | 0.60 | 47.0 | 3.64e-01 | 100.0% | 41.7% |
| 3625527 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.60 | 46.0 | 4.46e-01 | 100.0% | 87.3% |
| None | — | 0.60 | 47.0 | 3.06e-01 | 100.0% | 19.0% | |
| 3502501 | 376.1.1.66 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_16 | 0.60 | 47.0 | 4.07e-01 | 95.3% | 64.0% |
| 3743358 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.59 | 48.0 | 4.46e-01 | 100.0% | 91.7% |
| 3308237 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.59 | 47.0 | 4.19e-01 | 97.7% | 71.4% |
| 3327153 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.59 | 47.0 | 4.37e-01 | 97.7% | 83.3% |
| 3818617 | 376.1.1.103 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_Vps41 | 0.57 | 45.0 | 4.29e-01 | 95.3% | 80.0% |
| 1507759 | 376.1.1.5 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP | 0.57 | 44.0 | 3.37e-01 | 100.0% | 38.1% |
| 3935843 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.57 | 45.0 | 3.98e-01 | 100.0% | 86.7% |
| 3927096 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.57 | 44.0 | 3.86e-01 | 100.0% | 70.0% |
| 3714085 | 377.9.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-MYND | 0.56 | 43.0 | 4.37e-01 | 93.0% | 97.5% |
| 4148983 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.55 | 44.0 | 4.00e-01 | 100.0% | 81.5% |
| 3793771 | 376.1.1.15 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-Nse | 0.55 | 41.0 | 3.59e-01 | 100.0% | 70.5% |
| 3632492 | 109.4.1.736 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PHD | 0.51 | 38.0 | 2.64e-01 | 93.0% | 20.5% |
| 3414074 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.51 | 38.0 | 3.76e-01 | 97.7% | 98.0% |