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SRR1747021_scaffold_4_curated_closed_complete_prodigal-single.1__X__X__00065

Bact-Vir

SRR1747021_scaffold_4_curated_closed_complete_prodigal-single.1__X__X__00065

Identity

Kingdom:
phage

Quality

60.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-222
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1q6aA00 1.10.1240.30 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › KaiA/RbsU domain 0.62 31.0 4.17e-01 78.4% 92.5%
4p3fA00 1.10.3450.40 Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › Signal recognition particle, SRP68 subunit, RNA-binding domain 0.54 37.0 3.94e-01 81.2% 77.7%
1ldjA03 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.51 27.0 3.60e-01 73.9% 94.8%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4344933 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 39.0 3.30e-01 76.6% 40.6%
3180669 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 40.0 3.53e-01 78.4% 65.0%