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SRR1747021_scaffold_4_curated_closed_complete_prodigal-single.1__X__X__00116
Bact-VirSRR1747021_scaffold_4_curated_closed_complete_prodigal-single.1__X__X__00116
Identity
- Kingdom:
- phage
Quality
83.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-108
Domain cluster:
representative
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1608377 | 4029.1.1.1 ↗ | a+b duplicates or obligate multimers › SSH domain in siroheme synthase middle domains-like › SSH domain in siroheme synthase middle domains-like › SSH domain in siroheme synthase middle domains-like › Sirohm_synth_M | 0.57 | 22.0 | 2.57e-01 | 99.0% | 46.8% |
| 3506749 | 633.21.1.23 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CD20 | 0.54 | 37.0 | 3.17e-01 | 100.0% | 44.8% |
D2
medium
residues 124-201
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2a6cA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.73 | 54.0 | 5.46e-01 | 79.5% | 89.5% |
| 4yg1A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.72 | 53.0 | 5.50e-01 | 78.2% | 84.7% |
| 1y9qA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.68 | 50.0 | 4.88e-01 | 78.2% | 82.4% |
| 4pu7A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.66 | 49.0 | 5.12e-01 | 97.4% | 88.7% |
| 3fyaB00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.66 | 47.0 | 4.74e-01 | 75.6% | 80.5% |
| 2o38A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.65 | 44.0 | 4.72e-01 | 70.5% | 84.6% |
| 2r1jL00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.64 | 46.0 | 4.95e-01 | 75.6% | 89.4% |
| 3u3wA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.64 | 47.0 | 4.94e-01 | 76.9% | 88.4% |
| 2mqkA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.62 | 42.0 | 4.49e-01 | 70.5% | 92.3% |
| 3ivpD01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.62 | 47.0 | 4.77e-01 | 94.9% | 86.7% |
| 2ictA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.62 | 44.0 | 4.39e-01 | 75.6% | 79.0% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.59 | 45.0 | 3.92e-01 | 80.8% | 87.3% |
| 1r69A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.59 | 44.0 | 4.80e-01 | 97.4% | 100.0% |
| 3ubcA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.56 | 39.0 | 3.34e-01 | 74.4% | 90.8% |
| 2xcjA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.55 | 45.0 | 4.49e-01 | 100.0% | 88.1% |
| 2hinA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.54 | 39.0 | 4.16e-01 | 93.6% | 93.9% |
| 1reoA01 | 3.90.660.10 | Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › | 0.54 | 38.0 | 2.94e-01 | 74.4% | 45.0% |
| 4n06A02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.53 | 43.0 | 3.12e-01 | 94.9% | 53.0% |
| 1ynjD04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.53 | 37.0 | 3.09e-01 | 74.4% | 54.5% |
| 1k32A03 | 3.30.750.44 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.53 | 38.0 | 3.96e-01 | 76.9% | 90.3% |
| 1b0nA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.52 | 43.0 | 4.06e-01 | 96.2% | 93.2% |
| 1yzbA02 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.52 | 23.0 | 2.92e-01 | 71.8% | 69.6% |
| 4uiqB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.50 | 43.0 | 3.55e-01 | 100.0% | 69.9% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3285904 | 101.1.4.18 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 | 0.73 | 58.0 | 5.50e-01 | 98.7% | 72.6% |
| 3965598 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.70 | 48.0 | 5.05e-01 | 73.1% | 88.6% |
| 4464505 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.69 | 50.0 | 5.36e-01 | 75.6% | 93.8% |
| 3989217 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.69 | 49.0 | 5.35e-01 | 75.6% | 93.8% |
| 2791 | 101.1.4.20 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_37 | 0.69 | 53.0 | 5.16e-01 | 85.9% | 82.0% |
| 3589516 | 101.1.4.17 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 | 0.68 | 55.0 | 5.80e-01 | 98.7% | 98.6% |
| 3306298 | 101.1.4.53 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › PF29035 | 0.68 | 46.0 | 5.06e-01 | 70.5% | 93.3% |
| 3980119 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.68 | 50.0 | 5.21e-01 | 100.0% | 88.6% |
| 3987836 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.67 | 48.0 | 5.08e-01 | 75.6% | 87.1% |
| 1320087 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.67 | 48.0 | 5.08e-01 | 87.2% | 85.7% |
| 3587762 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.67 | 49.0 | 4.73e-01 | 80.8% | 69.3% |
| 2392399 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.65 | 47.0 | 4.90e-01 | 76.9% | 85.9% |
| 3062945 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.64 | 52.0 | 5.39e-01 | 94.9% | 100.0% |
| 4038777 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.64 | 50.0 | 4.80e-01 | 88.5% | 81.1% |
| 431258 | 101.1.4.17 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 | 0.64 | 45.0 | 4.75e-01 | 74.4% | 88.1% |
| 3947329 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.64 | 45.0 | 4.75e-01 | 75.6% | 89.2% |
| 3508650 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.64 | 47.0 | 5.06e-01 | 78.2% | 96.9% |
| 3988311 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.63 | 45.0 | 4.59e-01 | 75.6% | 78.7% |
| 5015485 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.63 | 43.0 | 4.54e-01 | 70.5% | 93.8% |
| 4943355 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.63 | 48.0 | 4.94e-01 | 85.9% | 96.0% |
| 4967965 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.62 | 43.0 | 4.49e-01 | 74.4% | 80.0% |
| 3958941 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.62 | 42.0 | 4.17e-01 | 73.1% | 67.5% |
| 4942426 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.62 | 43.0 | 4.65e-01 | 73.1% | 92.3% |
| 3980712 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.62 | 43.0 | 4.60e-01 | 75.6% | 90.5% |
| 3988789 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.62 | 52.0 | 5.31e-01 | 94.9% | 96.0% |
| 5027582 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.62 | 42.0 | 4.24e-01 | 74.4% | 70.0% |
| 5039762 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.61 | 51.0 | 4.84e-01 | 94.9% | 83.2% |
| 5007716 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.61 | 41.0 | 4.28e-01 | 70.5% | 78.6% |
| 3602378 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.61 | 41.0 | 4.36e-01 | 70.5% | 90.8% |
| 4945219 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.60 | 42.0 | 4.58e-01 | 74.4% | 95.0% |
| 5057414 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.60 | 41.0 | 4.33e-01 | 74.4% | 80.0% |
| 5061120 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.60 | 42.0 | 4.11e-01 | 76.9% | 65.6% |
| 4975718 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.60 | 48.0 | 4.87e-01 | 91.0% | 96.0% |
| 3964429 | 101.1.4.28 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_92 | 0.59 | 40.0 | 3.85e-01 | 70.5% | 60.0% |
| 4484890 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.59 | 41.0 | 3.95e-01 | 74.4% | 62.2% |
| 2766 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.59 | 44.0 | 4.80e-01 | 97.4% | 100.0% |
| 1487484 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.59 | 47.0 | 5.02e-01 | 94.9% | 100.0% |
| 3953342 | 101.1.4.61 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › PF27182 | 0.59 | 40.0 | 3.40e-01 | 71.8% | 40.7% |
| 3395038 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.58 | 42.0 | 4.50e-01 | 76.9% | 93.8% |
| 4405096 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.57 | 43.0 | 4.56e-01 | 82.1% | 92.9% |
| 4173793 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.55 | 41.0 | 4.15e-01 | 82.1% | 82.5% |
| 3733648 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 41.0 | 3.13e-01 | 84.6% | 49.7% |
| 3941821 | 3577.1.1.1 ↗ | alpha arrays › Macrodomain Ter protein MatP › Macrodomain Ter protein MatP › Macrodomain Ter protein MatP › MatP | 0.51 | 39.0 | 4.10e-01 | 94.9% | 95.7% |