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SRR1747021_scaffold_4_curated_closed_complete_prodigal-single.1__X__X__00237
Bact-VirSRR1747021_scaffold_4_curated_closed_complete_prodigal-single.1__X__X__00237
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-171
Domain cluster:
rep: pre3_saliva_scaffold_3_prodigal-single.1__X__X__00137__D2-176
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6p4xA03 | 3.40.367.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › | 0.61 | 44.0 | 3.74e-01 | 73.5% | 92.9% |
| 3ohrA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.56 | 42.0 | 4.07e-01 | 76.5% | 90.1% |
| 1zu4A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 42.0 | 3.84e-01 | 78.8% | 88.5% |
| 6c6bB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 43.0 | 4.07e-01 | 81.2% | 85.9% |
| 5hciC00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 43.0 | 3.85e-01 | 84.7% | 98.8% |
| 2vliB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 41.0 | 4.14e-01 | 80.6% | 94.8% |
| 2l82A00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 41.0 | 4.26e-01 | 81.8% | 90.7% |
| 1ywfA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.53 | 45.0 | 4.03e-01 | 92.4% | 84.6% |
| 3h7aA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 39.0 | 3.66e-01 | 80.6% | 91.0% |
| 2qv5A01 | 3.20.20.370 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase | 0.51 | 38.0 | 3.47e-01 | 78.2% | 90.2% |
| 1zxxA02 | 3.40.50.460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphofructokinase domain | 0.51 | 32.0 | 3.60e-01 | 72.9% | 82.4% |
| 3v9pB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 39.0 | 3.74e-01 | 80.6% | 98.0% |
| 2bdtA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 39.0 | 3.96e-01 | 81.2% | 97.7% |
| 6s8oB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 37.0 | 3.48e-01 | 77.1% | 90.1% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3691863 | 7525.1.1.2 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_2 | 0.63 | 53.0 | 4.62e-01 | 91.2% | 97.0% |
| 4489684 | 7572.1.1.2 ↗ | a/b three-layered sandwiches › Phosphofructokinase C-terminal domain › Phosphofructokinase C-terminal domain › Phosphofructokinase C-terminal domain › PapZ_C | 0.60 | 40.0 | 4.54e-01 | 74.7% | 92.7% |
| 4061782 | 7572.1.1.2 ↗ | a/b three-layered sandwiches › Phosphofructokinase C-terminal domain › Phosphofructokinase C-terminal domain › Phosphofructokinase C-terminal domain › PapZ_C | 0.59 | 41.0 | 4.56e-01 | 74.7% | 92.3% |
| 4886704 | 2004.1.1.761 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PapZ_C | 0.58 | 39.0 | 4.49e-01 | 74.7% | 95.8% |
| 4064123 | 7572.1.1.2 ↗ | a/b three-layered sandwiches › Phosphofructokinase C-terminal domain › Phosphofructokinase C-terminal domain › Phosphofructokinase C-terminal domain › PapZ_C | 0.57 | 39.0 | 4.38e-01 | 74.7% | 91.5% |
| 3701198 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 44.0 | 3.82e-01 | 81.2% | 94.2% |
| 3614023 | 2007.2.3.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Myotub-related | 0.56 | 43.0 | 3.35e-01 | 81.8% | 87.3% |
| 5026414 | 2004.1.1.94 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP_bind_1 | 0.55 | 43.0 | 3.73e-01 | 81.2% | 94.2% |
| 3279435 | 2007.2.3.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase3 | 0.54 | 46.0 | 4.18e-01 | 92.9% | 82.8% |
| 3496213 | 2007.2.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II | 0.54 | 46.0 | 4.51e-01 | 88.8% | 88.3% |
| 3685283 | 2004.1.1.457 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C, ERCC3_RAD25_C | 0.54 | 40.0 | 3.50e-01 | 77.6% | 73.5% |
| 3785575 | 7590.1.1.0 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs | 0.53 | 41.0 | 3.98e-01 | 81.2% | 71.3% |
| 3882598 | 2004.1.1.635 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › KTI12, AAA_33 | 0.53 | 43.0 | 3.92e-01 | 84.7% | 96.8% |
| 3593028 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 39.0 | 4.18e-01 | 75.3% | 93.8% |
| 3168724 | 7525.1.1.1 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_1 | 0.52 | 44.0 | 3.75e-01 | 90.0% | 82.5% |
| 3997523 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.52 | 38.0 | 4.13e-01 | 75.3% | 100.0% |
| 4972772 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 39.0 | 3.63e-01 | 80.0% | 94.6% |
| 3500810 | 2008.1.1.68 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PND | 0.51 | 33.0 | 3.78e-01 | 76.5% | 89.2% |
| 4110868 | 2004.1.1.191 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_17 | 0.51 | 39.0 | 3.86e-01 | 80.6% | 99.5% |
| 3927690 | 4967.1.1.0 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases | 0.51 | 19.0 | 2.69e-01 | 95.9% | 66.3% |
| 3659883 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 29.0 | 3.60e-01 | 80.6% | 93.0% |
| 3473187 | 2006.1.5.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Arginase/deacetylase › Hist_deacetyl | 0.50 | 43.0 | 3.09e-01 | 92.9% | 88.6% |