←Back to structures
SRR1747022_scaffold_36_prodigal-single.1__X__X__00082
Bact-VirSRR1747022_scaffold_36_prodigal-single.1__X__X__00082
Identity
- Kingdom:
- phage
Quality
84.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-28_75-124_253-331
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6b8hO01 | 1.10.520.20 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0.58 | 32.0 | 3.81e-01 | 82.2% | 80.8% |
| 2gfhA02 | 1.20.120.710 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain | 0.58 | 30.0 | 3.81e-01 | 87.9% | 87.2% |
| 1zcdA00 | 1.20.1530.10 | Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › Na+/H+ antiporter like domain | 0.55 | 44.0 | 3.34e-01 | 83.4% | 65.2% |
| 1e91A00 | 1.20.1160.11 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix | 0.55 | 30.0 | 3.84e-01 | 73.9% | 95.3% |
| 2vs0A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.53 | 25.0 | 3.27e-01 | 82.8% | 80.5% |
| 3a06B03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.52 | 24.0 | 3.11e-01 | 84.1% | 75.0% |
| 3pwxA01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.50 | 29.0 | 2.77e-01 | 95.5% | 46.7% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4397294 | 195.1.1.1 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like › NusB | 0.60 | 35.0 | 3.66e-01 | 98.7% | 60.7% |
| 3838401 | 192.10.1.0 ↗ | alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain | 0.60 | 26.0 | 3.22e-01 | 81.5% | 63.0% |
| 3604581 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.52 | 30.0 | 3.41e-01 | 84.7% | 74.2% |
| 4945865 | 633.12.1.0 ↗ | alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like | 0.51 | 30.0 | 3.76e-01 | 77.1% | 100.0% |
D2
high
residues 139-247
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4immA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.61 | 30.0 | 2.13e-01 | 78.9% | 15.4% |
| 5wbyC01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.61 | 33.0 | 2.36e-01 | 84.4% | 18.2% |
| 6g6qA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 31.0 | 2.85e-01 | 86.2% | 38.2% |
| 2kmsA02 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.58 | 23.0 | 2.98e-01 | 78.0% | 60.3% |
| 4fw1A02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.54 | 25.0 | 3.24e-01 | 89.9% | 81.5% |
| 6bogA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 24.0 | 3.22e-01 | 87.2% | 82.7% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4888996 | 5.1.5.77 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, Beta-prop_WDR75_1st | 0.62 | 32.0 | 2.28e-01 | 79.8% | 16.3% |
| 3647369 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.61 | 31.0 | 3.51e-01 | 84.4% | 63.7% |
| 3515458 | 5.1.4.61 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PAN2_N | 0.60 | 33.0 | 2.90e-01 | 86.2% | 35.4% |
| 3740470 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.60 | 32.0 | 2.34e-01 | 84.4% | 18.6% |
| 3265238 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.60 | 33.0 | 2.35e-01 | 86.2% | 17.7% |
| 3259273 | 5.1.5.212 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, Beta-prop_RIG_1st, Beta-prop_RIG_2nd | 0.59 | 34.0 | 2.01e-01 | 84.4% | 7.6% |
| 3205626 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 32.0 | 2.54e-01 | 86.2% | 26.0% |
| 3902222 | 5.1.2.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › WD40 | 0.57 | 32.0 | 2.76e-01 | 86.2% | 34.7% |
| 3938509 | 5.1.4.304 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR11_2nd | 0.57 | 34.0 | 2.46e-01 | 81.7% | 20.3% |
| 3505046 | 5.1.2.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › WD40 | 0.56 | 31.0 | 3.12e-01 | 84.4% | 50.4% |
| 3585799 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.56 | 32.0 | 2.55e-01 | 86.2% | 27.1% |
| 3908665 | 4.1.1.227 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP_KDM3B | 0.55 | 31.0 | 3.24e-01 | 83.5% | 58.9% |
| 3545942 | 5.1.11.11 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › WD40 | 0.55 | 31.0 | 2.11e-01 | 86.2% | 15.3% |
| 5079117 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 32.0 | 2.38e-01 | 79.8% | 21.8% |
| 3484813 | 319.1.1.5 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PIH1_CS | 0.54 | 40.0 | 4.35e-01 | 99.1% | 98.8% |
| 3214309 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 33.0 | 2.31e-01 | 84.4% | 18.9% |
| 4843420 | 5.1.1.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed › WD40 | 0.53 | 30.0 | 2.63e-01 | 86.2% | 34.5% |
| 4029126 | 5.1.4.265 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_WDR3_1st | 0.52 | 33.0 | 2.25e-01 | 86.2% | 17.7% |
| 3608449 | 5.1.4.235 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_1st | 0.52 | 31.0 | 2.08e-01 | 78.9% | 14.3% |
| 3433410 | 5.1.3.144 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like | 0.51 | 35.0 | 2.63e-01 | 87.2% | 26.4% |
D3
medium
residues 341-374
Domain cluster:
representative